RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 COL4A5P29400 1685 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
SOX6-213ENST00000530378 CHGBP05060 677 aa12.96□□□□□ -0.33
SOX6-213ENST00000530378 TBC1D9Q6ZT07 1266 aa12.96□□□□□ -0.33
SOX6-213ENST00000530378 FBXO33Q7Z6M2 555 aa12.96□□□□□ -0.33
SOX6-213ENST00000530378 HAUS7Q99871 368 aa12.96□□□□□ -0.33
SOX6-213ENST00000530378 ZC3H12CQ9C0D7 883 aaKnown RBP12.96□□□□□ -0.33
SOX6-213ENST00000530378 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
SOX6-213ENST00000530378 UQCRFS1P1P0C7P4 283 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 RTKN2Q8IZC4 609 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 SPATA5Q8NB90 893 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 ZNF784Q8NCA9 323 aaPredicted RBP12.95□□□□□ -0.34
SOX6-213ENST00000530378 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
SOX6-213ENST00000530378 DOCK2Q92608 1830 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 G3V3G9 751 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 NFKBIEO00221 500 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 YBX3P16989 372 aaKnown RBP eCLIP12.95□□□□□ -0.34
SOX6-213ENST00000530378 SLFNL1Q499Z3 407 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 EYA3Q99504 573 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 TAOK3Q9H2K8 898 aa12.95□□□□□ -0.34
SOX6-213ENST00000530378 PIH1D3Q9NQM4 214 aaKnown RBP12.95□□□□□ -0.34
SOX6-213ENST00000530378 CYP2E1P05181 493 aaPredicted RBP12.94□□□□□ -0.34
SOX6-213ENST00000530378 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
SOX6-213ENST00000530378 SOGA3Q5TF21 947 aa12.94□□□□□ -0.34
SOX6-213ENST00000530378 RTFDC1Q9BY42 306 aaPredicted RBP12.94□□□□□ -0.34
SOX6-213ENST00000530378 CD209Q9NNX6 404 aa12.94□□□□□ -0.34
SOX6-213ENST00000530378 KCNQ5Q9NR82 932 aa12.94□□□□□ -0.34
SOX6-213ENST00000530378 ECE2O60344 883 aa12.93□□□□□ -0.34
SOX6-213ENST00000530378 LARGE2Q8N3Y3 721 aa12.93□□□□□ -0.34
SOX6-213ENST00000530378 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
SOX6-213ENST00000530378 IDH1O75874 414 aaKnown RBP12.92□□□□□ -0.34
SOX6-213ENST00000530378 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
SOX6-213ENST00000530378 C8orf34Q49A92 452 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 ARHGAP27Q6ZUM4 889 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 C15orf52Q6ZUT6 534 aaKnown RBP12.92□□□□□ -0.34
SOX6-213ENST00000530378 SUPT20HQ8NEM7 779 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.92□□□□□ -0.34
SOX6-213ENST00000530378 EVI5LQ96CN4 794 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 PSMD1Q99460 953 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 MXD3Q9BW11 206 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 ZNF646O15015 1829 aaPredicted RBP12.92□□□□□ -0.34
SOX6-213ENST00000530378 CDC45O75419 566 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 PRELPP51888 382 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 KIAA2012Q0VF49 1180 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 TDRD7Q8NHU6 1098 aaKnown RBP12.92□□□□□ -0.34
SOX6-213ENST00000530378 ZNF512BQ96KM6 892 aaPredicted RBP12.92□□□□□ -0.34
SOX6-213ENST00000530378 DENND2AQ9ULE3 1009 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 ADAMTSL1Q8N6G6 1762 aa12.92□□□□□ -0.34
SOX6-213ENST00000530378 SBF1O95248 1867 aa12.91□□□□□ -0.34
SOX6-213ENST00000530378 IARSP41252 1262 aaKnown RBP12.91□□□□□ -0.34
SOX6-213ENST00000530378 GTF2IP78347 998 aa12.91□□□□□ -0.34
SOX6-213ENST00000530378 MAST2Q6P0Q8 1798 aa12.91□□□□□ -0.34
SOX6-213ENST00000530378 IL1R1P14778 569 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 GRIK5Q16478 980 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 KBTBD3Q8NAB2 608 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 COA1Q9GZY4 146 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 DIAPH3Q9NSV4 1193 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 PSME4Q14997 1843 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 PRDX5P30044 214 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 NMIQ13287 307 aaPredicted RBP12.9□□□□□ -0.34
SOX6-213ENST00000530378 GPR162Q16538 588 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
SOX6-213ENST00000530378 FAM227BQ96M60 508 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 IL25Q9H293 177 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 RAI14Q9P0K7 980 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
SOX6-213ENST00000530378 TIAM2Q8IVF5 1701 aa12.89□□□□□ -0.35
SOX6-213ENST00000530378 A0A0D9SFI3 127 aa12.89□□□□□ -0.35
SOX6-213ENST00000530378 F8W031 263 aaPredicted RBP12.89□□□□□ -0.35
SOX6-213ENST00000530378 SEMA3EO15041 775 aa12.89□□□□□ -0.35
SOX6-213ENST00000530378 RAD17O75943 681 aa12.89□□□□□ -0.35
SOX6-213ENST00000530378 CHMLP26374 656 aa12.89□□□□□ -0.35
SOX6-213ENST00000530378 GRIPAP1Q4V328 841 aa12.89□□□□□ -0.35
SOX6-213ENST00000530378 NIM1KQ8IY84 436 aa12.89□□□□□ -0.35
SOX6-213ENST00000530378 SEC24BO95487 1268 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 MFSD14BQ5SR56 506 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 MAGEB6Q8N7X4 407 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 SEC62Q99442 399 aaKnown RBP12.88□□□□□ -0.35
SOX6-213ENST00000530378 MYH2Q9UKX2 1941 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 DICER1Q9UPY3 1922 aaKnown RBP12.88□□□□□ -0.35
SOX6-213ENST00000530378 PDE6AP16499 860 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 MFAP1P55081 439 aaKnown RBP12.88□□□□□ -0.35
SOX6-213ENST00000530378 TTF1Q15361 905 aaPredicted RBP12.88□□□□□ -0.35
SOX6-213ENST00000530378 SLC9C2Q5TAH2 1124 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 TTLL5Q6EMB2 1281 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 CCDC129Q6ZRS4 1044 aa12.88□□□□□ -0.35
SOX6-213ENST00000530378 DIXDC1Q155Q3 683 aa12.87□□□□□ -0.35
SOX6-213ENST00000530378 CERS5Q8N5B7 392 aa12.87□□□□□ -0.35
SOX6-213ENST00000530378 U3KPZ7 1027 aaPredicted RBP12.87□□□□□ -0.35
SOX6-213ENST00000530378 ZNF532Q9HCE3 1301 aa12.87□□□□□ -0.35
SOX6-213ENST00000530378 M0R2C6 588 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 RNF113AO15541 343 aaKnown RBP12.86□□□□□ -0.35
SOX6-213ENST00000530378 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 CASC1Q6TDU7 716 aa12.86□□□□□ -0.35
SOX6-213ENST00000530378 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 237.5 ms