RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 INSRP06213 1382 aa9.66□□□□□ -0.86
CTNND1-225ENST00000530094 KDM5AP29375 1690 aaKnown RBP9.66□□□□□ -0.86
CTNND1-225ENST00000530094 IDEP14735 1019 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 SH2D4AQ9H788 454 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 ADGRL3Q9HAR2 1447 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 WDR17Q8IZU2 1322 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 ZBTB43O43298 467 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 LMOD1P29536 600 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-225ENST00000530094 PPM1EQ8WY54 764 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 SLC4A4Q9Y6R1 1079 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 UQCRHLA0A096LP55 91 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 UQCRHP07919 91 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 CALML3P27482 149 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 CCT2P78371 535 aaKnown RBP9.65□□□□□ -0.86
CTNND1-225ENST00000530094 ATP8B2P98198 1209 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 VAT1LQ9HCJ6 419 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 C6orf50Q9HD87 102 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 COMMD10Q9Y6G5 202 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 ZSCAN30Q86W11 494 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 KCNG4Q8TDN1 519 aa9.65□□□□□ -0.86
CTNND1-225ENST00000530094 METTL22Q9BUU2 404 aaPredicted RBP9.65□□□□□ -0.86
CTNND1-225ENST00000530094 RTN1Q16799 776 aa9.65□□□□□ -0.87
CTNND1-225ENST00000530094 FMNL3Q8IVF7 1028 aa9.65□□□□□ -0.87
CTNND1-225ENST00000530094 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
CTNND1-225ENST00000530094 NPC1L1Q9UHC9 1359 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 SPATA31A3Q5VYP0 1347 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 FERP16591 822 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 ITGA6P23229 1130 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 GUCY1B3Q02153 619 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 SMARCC2Q8TAQ2 1214 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 FAM107BQ9H098 131 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 GOPCQ9HD26 462 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 LOC102724428A0A0B4J2F2 783 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 SIK1P57059 783 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 GPR162Q16538 588 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 MCMDC2Q4G0Z9 681 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 MICU3Q86XE3 530 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 ASAP1Q9ULH1 1129 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 CDC42BPBQ9Y5S2 1711 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 MAGEB6P1A0A0J9YX57 407 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 FSD2A1L4K1 749 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 CERS3Q8IU89 383 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 IL17REQ8NFR9 667 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 BCS1LQ9Y276 419 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 CHL1O00533 1208 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 TFCP2Q12800 502 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 HDAC1Q13547 482 aaPredicted RBP9.64□□□□□ -0.87
CTNND1-225ENST00000530094 TAF3Q5VWG9 929 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 MSANTD4Q8NCY6 345 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 IMPG2Q9BZV3 1241 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 TRIM35Q9UPQ4 493 aa9.64□□□□□ -0.87
CTNND1-225ENST00000530094 EIF4A1P60842 406 aaKnown RBP9.64□□□□□ -0.87
CTNND1-225ENST00000530094 TTC41PQ6P2S7 1318 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 UBE2HP62256 183 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 SLC9C2Q5TAH2 1124 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 RRP36Q96EU6 259 aaKnown RBP9.63□□□□□ -0.87
CTNND1-225ENST00000530094 CCDC113Q9H0I3 377 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 BABAM1Q9NWV8 329 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 ECM2O94769 699 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-225ENST00000530094 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 ANKRD44Q8N8A2 993 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 HOOK2Q96ED9 719 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 PLCD4Q9BRC7 762 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 CGNQ9P2M7 1197 aaKnown RBP9.63□□□□□ -0.87
CTNND1-225ENST00000530094 SBNO2Q9Y2G9 1366 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 TMCO5BA8MYB1 307 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 PDE8AO60658 829 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 STAT6P42226 847 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 CKAP4Q07065 602 aaKnown RBP9.63□□□□□ -0.87
CTNND1-225ENST00000530094 TRIM47Q96LD4 638 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 PLA2R1Q13018 1463 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 KLF18A0A0U1RQI7 1052 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 DPP8Q6V1X1 898 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-225ENST00000530094 SYNCQ9H7C4 482 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 STX8Q9UNK0 236 aa9.63□□□□□ -0.87
CTNND1-225ENST00000530094 CLTCQ00610 1675 aaKnown RBP9.63□□□□□ -0.87
CTNND1-225ENST00000530094 LMAN1P49257 510 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 PUF60Q9UHX1 559 aaKnown RBP9.62□□□□□ -0.87
CTNND1-225ENST00000530094 USP19O94966 1318 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 PHACTR2O75167 634 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 URI1O94763 535 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-225ENST00000530094 FLAD1Q8NFF5 587 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 ZNF594Q96JF6 807 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-225ENST00000530094 IKBKGQ9Y6K9 419 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 ERBB3P21860 1342 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 MACROD2A1Z1Q3 448 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 ESPNB1AK53 854 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 IGHDP01880 384 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 CYLC1P35663 651 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-225ENST00000530094 CCDC144CPQ8IYA2 1237 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 MIGA1Q8NAN2 632 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 LMBR1Q8WVP7 490 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 RBM28Q9NW13 759 aaKnown RBP9.62□□□□□ -0.87
CTNND1-225ENST00000530094 GGA1Q9UJY5 639 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 SPDYE3A6NKU9 549 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 HOXB7P09629 217 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 TBC1D9Q6ZT07 1266 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 RAB11FIP4Q86YS3 637 aa9.62□□□□□ -0.87
CTNND1-225ENST00000530094 RASAL2Q9UJF2 1139 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms