RNA–Protein interactions for RNA: ENST00000530041.5

USP47-209, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 3

Gene USP47, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-209ENST00000530041 ARL4DP49703 201 aa8.76□□□□□ -1.01
USP47-209ENST00000530041 DUOXA2Q1HG44 320 aa8.76□□□□□ -1.01
USP47-209ENST00000530041 ACAD11Q709F0 780 aa8.76□□□□□ -1.01
USP47-209ENST00000530041 AGGF1Q8N302 714 aaeCLIP8.76□□□□□ -1.01
USP47-209ENST00000530041 FOXD4L4Q8WXT5 416 aaPredicted RBP8.76□□□□□ -1.01
USP47-209ENST00000530041 SLC7A3Q8WY07 619 aa8.76□□□□□ -1.01
USP47-209ENST00000530041 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
USP47-209ENST00000530041 DCTN4Q9UJW0 460 aa8.76□□□□□ -1.01
USP47-209ENST00000530041 SOX1O00570 391 aaPredicted RBP8.75□□□□□ -1.01
USP47-209ENST00000530041 C19orf57Q0VDD7 668 aa8.75□□□□□ -1.01
USP47-209ENST00000530041 IKBKEQ14164 716 aa8.75□□□□□ -1.01
USP47-209ENST00000530041 KIAA0319Q5VV43 1072 aa8.75□□□□□ -1.01
USP47-209ENST00000530041 CCNJLQ8IV13 435 aa8.75□□□□□ -1.01
USP47-209ENST00000530041 LIN7BQ9HAP6 207 aa8.75□□□□□ -1.01
USP47-209ENST00000530041 LOC100996750A0A140TA64 210 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 METTL12A8MUP2 240 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 EIF1AYO14602 144 aaKnown RBP8.74□□□□□ -1.01
USP47-209ENST00000530041 GLB1P16278 677 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 KIAA1211Q6ZU35 1233 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 TCF12Q99081 682 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 SOX17Q9H6I2 414 aaPredicted RBP8.74□□□□□ -1.01
USP47-209ENST00000530041 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
USP47-209ENST00000530041 A0A096LPE4 126 aa8.73□□□□□ -1.01
USP47-209ENST00000530041 A0A1W2PPZ6 126 aa8.73□□□□□ -1.01
USP47-209ENST00000530041 ESRRAP11474 423 aaPredicted RBP8.73□□□□□ -1.01
USP47-209ENST00000530041 HGSNATQ68CP4 663 aa8.73□□□□□ -1.01
USP47-209ENST00000530041 TMC7Q7Z402 723 aa8.73□□□□□ -1.01
USP47-209ENST00000530041 CSRNP1Q96S65 589 aa8.73□□□□□ -1.01
USP47-209ENST00000530041 NPHS2Q9NP85 383 aa8.73□□□□□ -1.01
USP47-209ENST00000530041 GRIA4P48058 902 aa8.72□□□□□ -1.01
USP47-209ENST00000530041 NLRP12P59046 1061 aa8.72□□□□□ -1.01
USP47-209ENST00000530041 PRSS36Q5K4E3 855 aa8.72□□□□□ -1.01
USP47-209ENST00000530041 PRR23CQ6ZRP0 262 aa8.72□□□□□ -1.01
USP47-209ENST00000530041 CCDC74AQ96AQ1 378 aa8.72□□□□□ -1.01
USP47-209ENST00000530041 UBL7Q96S82 380 aaPredicted RBP8.72□□□□□ -1.01
USP47-209ENST00000530041 CEP41Q9BYV8 373 aa8.72□□□□□ -1.01
USP47-209ENST00000530041 MAPK1P28482 360 aa8.71□□□□□ -1.02
USP47-209ENST00000530041 EHD4Q9H223 541 aa8.71□□□□□ -1.02
USP47-209ENST00000530041 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
USP47-209ENST00000530041 SPRED3Q2MJR0 410 aa8.7□□□□□ -1.02
USP47-209ENST00000530041 CLEC4MQ9H2X3 399 aaPredicted RBP8.7□□□□□ -1.02
USP47-209ENST00000530041 PATL2C9JE40 543 aaKnown RBP8.69□□□□□ -1.02
USP47-209ENST00000530041 PCDH1Q08174 1060 aa8.69□□□□□ -1.02
USP47-209ENST00000530041 UVSSAQ2YD98 709 aa8.69□□□□□ -1.02
USP47-209ENST00000530041 RNF208Q9H0X6 261 aa8.69□□□□□ -1.02
USP47-209ENST00000530041 MEGF11A6BM72 1044 aa8.68□□□□□ -1.02
USP47-209ENST00000530041 DSC3Q14574 896 aa8.68□□□□□ -1.02
USP47-209ENST00000530041 ANKRD34AQ69YU3 496 aa8.68□□□□□ -1.02
USP47-209ENST00000530041 FAM46AQ96IP4 442 aaKnown RBP8.68□□□□□ -1.02
USP47-209ENST00000530041 RUSC1Q9BVN2 902 aa8.68□□□□□ -1.02
USP47-209ENST00000530041 TREHO43280 583 aa8.67□□□□□ -1.02
USP47-209ENST00000530041 GADD45BO75293 160 aaPredicted RBP8.67□□□□□ -1.02
USP47-209ENST00000530041 ITPKAP23677 461 aa8.67□□□□□ -1.02
USP47-209ENST00000530041 PLCB3Q01970 1234 aa8.67□□□□□ -1.02
USP47-209ENST00000530041 GSTM4Q03013 218 aa8.67□□□□□ -1.02
USP47-209ENST00000530041 ZNF423Q2M1K9 1284 aa8.67□□□□□ -1.02
USP47-209ENST00000530041 PRPF40BQ6NWY9 871 aaKnown RBP8.67□□□□□ -1.02
USP47-209ENST00000530041 ARMC10Q8N2F6 343 aa8.67□□□□□ -1.02
USP47-209ENST00000530041 EPS8L3Q8TE67 593 aaKnown RBP8.67□□□□□ -1.02
USP47-209ENST00000530041 LOC100289279A0A1B0GTE1 492 aa8.66□□□□□ -1.02
USP47-209ENST00000530041 PTPN12Q05209 780 aaKnown RBP8.66□□□□□ -1.02
USP47-209ENST00000530041 ZMYM1Q5SVZ6 1142 aa8.66□□□□□ -1.02
USP47-209ENST00000530041 USP26Q9BXU7 913 aa8.66□□□□□ -1.02
USP47-209ENST00000530041 ZNF576Q9H609 170 aa8.66□□□□□ -1.02
USP47-209ENST00000530041 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
USP47-209ENST00000530041 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
USP47-209ENST00000530041 DHX15O43143 795 aaKnown RBP8.65□□□□□ -1.02
USP47-209ENST00000530041 GRM2Q14416 872 aa8.65□□□□□ -1.02
USP47-209ENST00000530041 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.02
USP47-209ENST00000530041 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.02
USP47-209ENST00000530041 NRSN2Q9GZP1 204 aa8.65□□□□□ -1.02
USP47-209ENST00000530041 RAXQ9Y2V3 346 aa8.65□□□□□ -1.02
USP47-209ENST00000530041 TMEM238LA0A1B0GVL6 79 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 SART1O43290 800 aaKnown RBP8.64□□□□□ -1.03
USP47-209ENST00000530041 B3GALT4O96024 378 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
USP47-209ENST00000530041 NUTM2GQ5VZR2 741 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 FDX2Q6P4F2 183 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 SLC51AQ86UW1 340 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 ZSCAN29Q8IWY8 852 aaPredicted RBP8.64□□□□□ -1.03
USP47-209ENST00000530041 GLIS3Q8NEA6 775 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 NLRP2Q9NX02 1062 aa8.64□□□□□ -1.03
USP47-209ENST00000530041 PNMA6FA0A0J9YX94 578 aa8.63□□□□□ -1.03
USP47-209ENST00000530041 DLGAP3O95886 979 aa8.63□□□□□ -1.03
USP47-209ENST00000530041 PREPP48147 710 aa8.63□□□□□ -1.03
USP47-209ENST00000530041 EXOSC6Q5RKV6 272 aaKnown RBP8.63□□□□□ -1.03
USP47-209ENST00000530041 SMG8Q8ND04 991 aaKnown RBP8.63□□□□□ -1.03
USP47-209ENST00000530041 DDX54Q8TDD1 881 aaKnown RBP8.63□□□□□ -1.03
USP47-209ENST00000530041 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
USP47-209ENST00000530041 SUGCTQ9HAC7 445 aa8.63□□□□□ -1.03
USP47-209ENST00000530041 CYP11A1P05108 521 aa8.62□□□□□ -1.03
USP47-209ENST00000530041 FSTP19883 344 aa8.62□□□□□ -1.03
USP47-209ENST00000530041 RPS26P11Q5JNZ5 115 aaPredicted RBP8.62□□□□□ -1.03
USP47-209ENST00000530041 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.62□□□□□ -1.03
USP47-209ENST00000530041 CYP4F12Q9HCS2 524 aa8.62□□□□□ -1.03
USP47-209ENST00000530041 STOML1Q9UBI4 398 aa8.62□□□□□ -1.03
USP47-209ENST00000530041 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms