RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 FAAP100Q0VG06 881 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 DBN1Q16643 649 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 FAM196AQ6ZSG2 479 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 ASAP3Q8TDY4 903 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 ABHD17AQ96GS6 310 aa9.38□□□□□ -0.91
CAPRIN1-208ENST00000530008 AXIN1O15169 862 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 CRKP46108 304 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 TCEAL1Q15170 157 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 SLITRK4Q8IW52 837 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 TRIM22Q8IYM9 498 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 HNRNPLLQ8WVV9 542 aaKnown RBP9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 ANAPC16Q96DE5 110 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 SRRTQ9BXP5 876 aaKnown RBP9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 PBX4Q9BYU1 374 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 TRIM55Q9BYV6 548 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 PRKAG3Q9UGI9 489 aa9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 MRPL42Q9Y6G3 142 aaKnown RBP9.37□□□□□ -0.91
CAPRIN1-208ENST00000530008 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 SIK1P57059 783 aa9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 GPLD1P80108 840 aa9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 RAB33AQ14088 237 aa9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 TRPM4Q8TD43 1214 aa9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 RASSF4Q9H2L5 321 aa9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 GPN3Q9UHW5 284 aaPredicted RBP9.36□□□□□ -0.91
CAPRIN1-208ENST00000530008 ZBTB42B2RXF5 422 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 J3QW42 95 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 DGAT1O75907 488 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 ATP11AP98196 1134 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 MLLT1Q03111 559 aaPredicted RBP9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 NEUROD1Q13562 356 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 TRIM42Q8IWZ5 723 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 CRIPAKQ8N1N5 446 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 SRPK1Q96SB4 655 aaKnown RBP9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 ATXN7L1Q9ULK2 861 aaPredicted RBP9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 ROBO2Q9HCK4 1378 aa9.35□□□□□ -0.91
CAPRIN1-208ENST00000530008 F13A1P00488 732 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 SEZ6Q53EL9 994 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 FAM182BQ5T319 152 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 BNC2Q6ZN30 1099 aaPredicted RBP9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 HFE2Q6ZVN8 426 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 CCDC84Q86UT8 332 aaPredicted RBP9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 SHDQ96IW2 340 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 LRRC3Q9BY71 257 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 MUC3BQ9H195 1237 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 TMEM39AQ9NV64 488 aa9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 R3HCC1Q9Y3T6 440 aaKnown RBP9.34□□□□□ -0.91
CAPRIN1-208ENST00000530008 TLR3O15455 904 aaKnown RBP9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 LMNB1P20700 586 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 HSD3B2P26439 372 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 CCDC81Q6ZN84 652 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 CCDC155Q8N6L0 562 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 FBXO27Q8NI29 283 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 GMCL1Q96IK5 515 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 PPT2Q9UMR5 302 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 PCDHB5Q9Y5E4 795 aa9.33□□□□□ -0.92
CAPRIN1-208ENST00000530008 GHRHP01286 108 aa9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 FGFR3P22607 806 aa9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 ZNF157P51786 506 aaPredicted RBP9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 PPP2R3AQ06190 1150 aa9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 GTPBP3Q969Y2 492 aaKnown RBP9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 ZNF837Q96EG3 531 aaPredicted RBP9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 POP1Q99575 1024 aaKnown RBP9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 MIR1-1HGQ9H1L0 117 aa9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 ATP13A2Q9NQ11 1180 aa9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 SNTG2Q9NY99 539 aa9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 SAMM50Q9Y512 469 aa9.32□□□□□ -0.92
CAPRIN1-208ENST00000530008 SMAD7O15105 426 aaKnown RBP9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 TNNI3KQ59H18 835 aa9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 RASIP1Q5U651 963 aa9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 LRP10Q7Z4F1 713 aa9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 GATAD2BQ8WXI9 593 aa9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 BSNDQ8WZ55 320 aa9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 JARID2Q92833 1246 aaPredicted RBP9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 DEPDC7Q96QD5 511 aa9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 RBSNQ9H1K0 784 aa9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 CLEC4MQ9H2X3 399 aaPredicted RBP9.31□□□□□ -0.92
CAPRIN1-208ENST00000530008 FAM221AA4D161 298 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 RGS20O76081 388 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 CLSTN1O94985 981 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 BMP6P22004 513 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 EIF6P56537 245 aaKnown RBP9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 MPP2Q14168 576 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 RASA3Q14644 834 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 PCSK7Q16549 785 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 IGFLR1Q9H665 355 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 DNAJB12Q9NXW2 375 aaKnown RBP9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 PHF24Q9UPV7 400 aa9.3□□□□□ -0.92
CAPRIN1-208ENST00000530008 FAM221BA6H8Z2 402 aa9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 ENPP3O14638 875 aa9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 SMNDC1O75940 238 aaKnown RBP eCLIP9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 EIF2AK2P19525 551 aaKnown RBP9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 NME2P22392 152 aa9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 MCM4P33991 863 aa9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 PCDH1Q08174 1060 aa9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 SEPT6Q14141 434 aa9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 CWF19L2Q2TBE0 894 aaKnown RBP9.29□□□□□ -0.92
CAPRIN1-208ENST00000530008 CEP135Q66GS9 1140 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms