RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 MCAMP43121 646 aa16.64■□□□□ 0.25
SMCO4-205ENST00000529714 SPATA5Q8NB90 893 aa16.64■□□□□ 0.25
SMCO4-205ENST00000529714 HAUS7Q99871 368 aa16.64■□□□□ 0.25
SMCO4-205ENST00000529714 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
SMCO4-205ENST00000529714 TIAM2Q8IVF5 1701 aa16.64■□□□□ 0.25
SMCO4-205ENST00000529714 SCN9AQ15858 1988 aa16.64■□□□□ 0.25
SMCO4-205ENST00000529714 ZNF646O15015 1829 aaPredicted RBP16.63■□□□□ 0.25
SMCO4-205ENST00000529714 COL1A1P02452 1464 aaPredicted RBP16.63■□□□□ 0.25
SMCO4-205ENST00000529714 SCARF1Q14162 830 aa16.63■□□□□ 0.25
SMCO4-205ENST00000529714 HMG20BQ9P0W2 317 aa16.63■□□□□ 0.25
SMCO4-205ENST00000529714 ZC3H4Q9UPT8 1303 aaKnown RBP16.63■□□□□ 0.25
SMCO4-205ENST00000529714 YDJCA8MPS7 323 aa16.62■□□□□ 0.25
SMCO4-205ENST00000529714 FZD9O00144 591 aa16.62■□□□□ 0.25
SMCO4-205ENST00000529714 STRIP1Q5VSL9 837 aa16.62■□□□□ 0.25
SMCO4-205ENST00000529714 TSHZ3Q63HK5 1081 aa16.62■□□□□ 0.25
SMCO4-205ENST00000529714 WDR66Q8TBY9 1149 aa16.62■□□□□ 0.25
SMCO4-205ENST00000529714 IQSEC3Q9UPP2 1182 aaPredicted RBP16.62■□□□□ 0.25
SMCO4-205ENST00000529714 SALL1Q9NSC2 1324 aa16.62■□□□□ 0.25
SMCO4-205ENST00000529714 UTRNP46939 3433 aa16.62■□□□□ 0.25
SMCO4-205ENST00000529714 USP17L3A6NCW0 530 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 USP17L4A6NCW7 530 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 IGSF3O75054 1194 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 FKBP1AP62942 108 aaKnown RBP16.61■□□□□ 0.25
SMCO4-205ENST00000529714 TTC22Q5TAA0 569 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 USP17L1Q7RTZ2 530 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 ZGPATQ8N5A5 531 aaKnown RBP16.61■□□□□ 0.25
SMCO4-205ENST00000529714 TBC1D22AQ8WUA7 517 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 RNF181Q9P0P0 153 aa16.61■□□□□ 0.25
SMCO4-205ENST00000529714 ZAP70P43403 619 aa16.6■□□□□ 0.25
SMCO4-205ENST00000529714 RGS3P49796 1198 aa16.6■□□□□ 0.25
SMCO4-205ENST00000529714 GTF2IP78347 998 aa16.6■□□□□ 0.25
SMCO4-205ENST00000529714 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
SMCO4-205ENST00000529714 C9orf131Q5VYM1 1079 aa16.6■□□□□ 0.25
SMCO4-205ENST00000529714 TTLL5Q6EMB2 1281 aa16.6■□□□□ 0.25
SMCO4-205ENST00000529714 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
SMCO4-205ENST00000529714 EIF6P56537 245 aaKnown RBP16.59■□□□□ 0.25
SMCO4-205ENST00000529714 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
SMCO4-205ENST00000529714 TNIP1Q15025 636 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 DACT2Q5SW24 774 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 PI16Q6UXB8 463 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 SKAP1Q86WV1 359 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 TICAM2Q86XR7 235 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 DNAJC2Q99543 621 aaKnown RBP16.59■□□□□ 0.25
SMCO4-205ENST00000529714 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 PAG1Q9NWQ8 432 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 SUGT1Q9Y2Z0 365 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
SMCO4-205ENST00000529714 CYP2E1P05181 493 aaPredicted RBP16.58■□□□□ 0.24
SMCO4-205ENST00000529714 VIL1P09327 827 aaKnown RBP16.58■□□□□ 0.24
SMCO4-205ENST00000529714 CXCL9Q07325 125 aa16.58■□□□□ 0.24
SMCO4-205ENST00000529714 BMP2KLQ5H9B9 411 aa16.58■□□□□ 0.24
SMCO4-205ENST00000529714 CIAPIN1Q6FI81 312 aa16.58■□□□□ 0.24
SMCO4-205ENST00000529714 TMED8Q6PL24 325 aaPredicted RBP16.58■□□□□ 0.24
SMCO4-205ENST00000529714 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
SMCO4-205ENST00000529714 MAST2Q6P0Q8 1798 aa16.57■□□□□ 0.24
SMCO4-205ENST00000529714 GOLIM4O00461 696 aa16.57■□□□□ 0.24
SMCO4-205ENST00000529714 RAD17O75943 681 aa16.57■□□□□ 0.24
SMCO4-205ENST00000529714 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
SMCO4-205ENST00000529714 MFSD14BQ5SR56 506 aa16.57■□□□□ 0.24
SMCO4-205ENST00000529714 SPTY2D1Q68D10 685 aaPredicted RBP16.57■□□□□ 0.24
SMCO4-205ENST00000529714 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
SMCO4-205ENST00000529714 AK9Q5TCS8 1911 aa16.57■□□□□ 0.24
SMCO4-205ENST00000529714 PSMD14O00487 310 aa16.56■□□□□ 0.24
SMCO4-205ENST00000529714 RSBN1LQ6PCB5 846 aaPredicted RBP16.56■□□□□ 0.24
SMCO4-205ENST00000529714 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
SMCO4-205ENST00000529714 KBTBD3Q8NAB2 608 aa16.56■□□□□ 0.24
SMCO4-205ENST00000529714 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
SMCO4-205ENST00000529714 MYH7P12883 1935 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 RFX7Q2KHR2 1363 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 RPS12P25398 132 aaKnown RBP16.55■□□□□ 0.24
SMCO4-205ENST00000529714 MMP14P50281 582 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 LRRFIP1Q32MZ4 808 aaKnown RBP16.55■□□□□ 0.24
SMCO4-205ENST00000529714 GPC2Q8N158 579 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 CERS5Q8N5B7 392 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 AGBL3Q8NEM8 1001 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 ANTXR1Q9H6X2 564 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 PIH1D3Q9NQM4 214 aaKnown RBP16.55■□□□□ 0.24
SMCO4-205ENST00000529714 ABCF2Q9UG63 623 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 JAG2Q9Y219 1238 aa16.55■□□□□ 0.24
SMCO4-205ENST00000529714 MYO5AQ9Y4I1 1855 aaKnown RBP16.54■□□□□ 0.24
SMCO4-205ENST00000529714 ZNF541Q9H0D2 1346 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 TRIM6-TRIM34B2RNG4 842 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 LDHBP07195 334 aaKnown RBP16.54■□□□□ 0.24
SMCO4-205ENST00000529714 SDSP20132 328 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 EDC3Q96F86 508 aaKnown RBP16.54■□□□□ 0.24
SMCO4-205ENST00000529714 GMLQ99445 158 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMCO4-205ENST00000529714 LRP2BPQ9P2M1 347 aa16.54■□□□□ 0.24
SMCO4-205ENST00000529714 MAST3O60307 1309 aa16.53■□□□□ 0.24
SMCO4-205ENST00000529714 MAP4K4O95819 1239 aaPredicted RBP16.53■□□□□ 0.24
SMCO4-205ENST00000529714 PRDX5P30044 214 aa16.53■□□□□ 0.24
SMCO4-205ENST00000529714 ZSCAN25Q6NSZ9 544 aa16.53■□□□□ 0.24
SMCO4-205ENST00000529714 DPF2Q92785 391 aa16.53■□□□□ 0.24
SMCO4-205ENST00000529714 IDH1O75874 414 aaKnown RBP16.52■□□□□ 0.24
SMCO4-205ENST00000529714 ZFYP08048 801 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms