RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 TPCN1Q9ULQ1 816 aa18.4■□□□□ 0.54
CCDC90B-213ENST00000529611 GYG1P46976 350 aa18.39■□□□□ 0.53
CCDC90B-213ENST00000529611 ANKRD1Q15327 319 aa18.39■□□□□ 0.53
CCDC90B-213ENST00000529611 ME3Q16798 604 aa18.39■□□□□ 0.53
CCDC90B-213ENST00000529611 TTLL5Q6EMB2 1281 aa18.39■□□□□ 0.53
CCDC90B-213ENST00000529611 RXRBP28702 533 aa18.39■□□□□ 0.53
CCDC90B-213ENST00000529611 BAG4O95429 457 aaKnown RBP18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 FGAP02671 866 aa18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 HMGB2P26583 209 aaKnown RBP18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 ST3GAL1Q11201 340 aa18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 MAP3K12Q12852 859 aa18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 LAMA4Q16363 1823 aa18.38■□□□□ 0.53
CCDC90B-213ENST00000529611 E7EWF7 191 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 CCDC83Q8IWF9 413 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 FAM84BQ96KN1 310 aaPredicted RBP18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 ANKRD2Q9GZV1 360 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 IQSEC3Q9UPP2 1182 aaPredicted RBP18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 COL1A1P02452 1464 aaPredicted RBP18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 BRD1O95696 1058 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 APBA3O96018 575 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 SERPINB2P05120 415 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 HMGB1P09429 215 aaKnown RBP18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 CAVIN4Q5BKX8 364 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 MAGEB6Q8N7X4 407 aa18.37■□□□□ 0.53
CCDC90B-213ENST00000529611 GRAPQ13588 217 aa18.36■□□□□ 0.53
CCDC90B-213ENST00000529611 GRAPLQ8TC17 118 aaPredicted RBP18.36■□□□□ 0.53
CCDC90B-213ENST00000529611 GNL3LQ9NVN8 582 aaKnown RBP18.36■□□□□ 0.53
CCDC90B-213ENST00000529611 KLRK1P26718 216 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 DDR1Q08345 913 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 ST5P78524 1137 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 IMMTQ16891 758 aaKnown RBP18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 CRY2Q49AN0 593 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 Q6ZUG5 572 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 DHX32Q7L7V1 743 aaKnown RBP18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 FBXO33Q7Z6M2 555 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 NECAB1Q8N987 351 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 TFCP2L1Q9NZI6 479 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 SMC3Q9UQE7 1217 aa18.35■□□□□ 0.53
CCDC90B-213ENST00000529611 POLRMTO00411 1230 aaKnown RBP18.34■□□□□ 0.53
CCDC90B-213ENST00000529611 HAND2P61296 217 aa18.34■□□□□ 0.53
CCDC90B-213ENST00000529611 VPS37DQ86XT2 251 aa18.34■□□□□ 0.53
CCDC90B-213ENST00000529611 AIDAQ96BJ3 306 aa18.34■□□□□ 0.53
CCDC90B-213ENST00000529611 STRBPQ96SI9 672 aaKnown RBP18.34■□□□□ 0.53
CCDC90B-213ENST00000529611 TRAK2O60296 914 aa18.33■□□□□ 0.53
CCDC90B-213ENST00000529611 DEKP35659 375 aaKnown RBP18.33■□□□□ 0.53
CCDC90B-213ENST00000529611 EXOSC10Q01780 885 aaKnown RBP18.33■□□□□ 0.53
CCDC90B-213ENST00000529611 GSE1Q14687 1217 aa18.33■□□□□ 0.53
CCDC90B-213ENST00000529611 LRP2BPQ9P2M1 347 aa18.33■□□□□ 0.53
CCDC90B-213ENST00000529611 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.52
CCDC90B-213ENST00000529611 SLC51AQ86UW1 340 aa18.33■□□□□ 0.52
CCDC90B-213ENST00000529611 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.52
CCDC90B-213ENST00000529611 LRRC2Q9BYS8 371 aa18.33■□□□□ 0.52
CCDC90B-213ENST00000529611 DENND2AQ9ULE3 1009 aa18.33■□□□□ 0.52
CCDC90B-213ENST00000529611 MBD4O95243 580 aa18.32■□□□□ 0.52
CCDC90B-213ENST00000529611 AGXT2Q9BYV1 514 aa18.32■□□□□ 0.52
CCDC90B-213ENST00000529611 RGS17Q9UGC6 210 aaPredicted RBP18.32■□□□□ 0.52
CCDC90B-213ENST00000529611 IRS2Q9Y4H2 1338 aa18.32■□□□□ 0.52
CCDC90B-213ENST00000529611 GOLGA6L22H0YM25 854 aa18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 GJB2P29033 226 aa18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 RPGRQ92834 1020 aaKnown RBP18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 BRF1Q92994 677 aa18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 TNS1Q9HBL0 1735 aaKnown RBP18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 ZNF213O14771 459 aa18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 SEMA3EO15041 775 aa18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 PTMSP20962 102 aa18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 HIBADHP31937 336 aaKnown RBP18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 COL23A1Q86Y22 540 aaPredicted RBP18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 ABCF2Q9UG63 623 aa18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 WDR33Q9C0J8 1336 aaKnown RBP18.31■□□□□ 0.52
CCDC90B-213ENST00000529611 DTNBO60941 627 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 SYT1P21579 422 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 MCTP1Q6DN14 999 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 TXNRD3Q86VQ6 643 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 ARMT1Q9H993 441 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 APPP05067 770 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 STK3Q13188 491 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 ALX1Q15699 326 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 NBPF3Q9H094 633 aa18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 EPB41L4AQ9HCS5 686 aaPredicted RBP18.3■□□□□ 0.52
CCDC90B-213ENST00000529611 ZMYM6O95789 1325 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 PDS5AQ29RF7 1337 aaKnown RBP18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 PNPLA7Q6ZV29 1317 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 CACNA1SQ13698 1873 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 PATL2C9JE40 543 aaKnown RBP18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 FGD1P98174 961 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 POTEAQ6S8J7 498 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 LCORLQ8N3X6 602 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 GTF3C6Q969F1 213 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 CHAMP1Q96JM3 812 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 ANKIB1Q9P2G1 1089 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 MYH13Q9UKX3 1938 aa18.29■□□□□ 0.52
CCDC90B-213ENST00000529611 KLRG2A4D1S0 409 aaPredicted RBP18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 STX6O43752 255 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 CYP7A1P22680 504 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 CHST3Q7LGC8 479 aa18.28■□□□□ 0.52
CCDC90B-213ENST00000529611 ADGRA1Q86SQ6 560 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms