RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 HDAC9Q9UKV0 1011 aa7.95□□□□□ -1.14
CHRNA6-202ENST00000529467 MYO3BQ8WXR4 1341 aa7.95□□□□□ -1.14
CHRNA6-202ENST00000529467 CSF1RP07333 972 aa7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 KLRK1P26718 216 aa7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 CASP7P55210 303 aa7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 NEXNQ0ZGT2 675 aa7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 MKRN3Q13064 507 aaKnown RBP7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 G2E3Q7L622 706 aa7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 FBXW7Q969H0 707 aa7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 ZNF804BA4D1E1 1349 aa7.94□□□□□ -1.14
CHRNA6-202ENST00000529467 FKTNO75072 461 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 SASH1O94885 1247 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 ITGA6P23229 1130 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 NF2P35240 595 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 IGHMBP2P38935 993 aaKnown RBP7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 GTF2IP78347 998 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 SREBF2Q12772 1141 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 PRKG1Q13976 671 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 GCKRQ14397 625 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 PRPF38BQ5VTL8 546 aaKnown RBP7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 SPRYD7Q5W111 196 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 FBXO46Q6PJ61 603 aaPredicted RBP7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 ARMC9Q7Z3E5 817 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 UBE3BQ7Z3V4 1068 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 KIAA0825Q8IV33 1275 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 ANKRD2Q9GZV1 360 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 CD209Q9NNX6 404 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 FZD1Q9UP38 647 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 IRS2Q9Y4H2 1338 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 CACNA1FO60840 1977 aa7.93□□□□□ -1.14
CHRNA6-202ENST00000529467 SNAP23O00161 211 aa7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 CHRNDQ07001 517 aa7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 MAP3K11Q16584 847 aa7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 C15orf52Q6ZUT6 534 aaKnown RBP7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 APOBEC3FQ8IUX4 373 aaKnown RBP7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 CERS5Q8N5B7 392 aa7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 MTMR14Q8NCE2 650 aa7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 TSR2Q969E8 191 aaKnown RBP7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 MPHOSPH8Q99549 860 aa7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 STK31Q9BXU1 1019 aa7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 ANGEL1Q9UNK9 670 aaKnown RBP7.92□□□□□ -1.14
CHRNA6-202ENST00000529467 ALDH1A1P00352 501 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 INHBEP58166 350 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 DLGAP5Q15398 846 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 CCDC27Q2M243 656 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 TWISTNBQ3B726 338 aaPredicted RBP7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 IFNL1Q8IU54 200 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 WWC1Q8IX03 1113 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 SLC10A4Q96EP9 437 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 PHF12Q96QT6 1004 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 DEFB129Q9H1M3 183 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 MRS2Q9HD23 443 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 PCDHAC2Q9Y5I4 1007 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 ECM29Q5VYK3 1845 aa7.91□□□□□ -1.14
CHRNA6-202ENST00000529467 MANSC4A6NHS7 340 aaPredicted RBP7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 UNCXA6NJT0 531 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 TAF5LO75529 589 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 USP2O75604 605 aaPredicted RBP7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 IL1R1P14778 569 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 FKBP1AP62942 108 aaKnown RBP7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 FOXO4P98177 505 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 FLIIQ13045 1269 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 CCDC184Q52MB2 194 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 HELBQ8NG08 1087 aaPredicted RBP7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 LINS1Q8NG48 757 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 DNAAF4Q8WXU2 420 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 CLMNQ96JQ2 1002 aa7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 PRMT6Q96LA8 375 aaPredicted RBP7.9□□□□□ -1.14
CHRNA6-202ENST00000529467 LAMB1P07942 1786 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 COL1A1P02452 1464 aaPredicted RBP7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 AOX1Q06278 1338 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 ANKRD18BA2A2Z9 1011 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 IGF2BP3O00425 579 aaKnown RBP eCLIP7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 PPP1R12BO60237 982 aaPredicted RBP7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 VAMP4O75379 141 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 ZBTB48P10074 688 aaPredicted RBP7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 KCNJ4P48050 445 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 CFAP100Q494V2 611 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 NBPF12Q5TAG4 269 aaPredicted RBP7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 OTOP1Q7RTM1 612 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 WNK4Q96J92 1243 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 MYH16Q9H6N6 1097 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 TRIM17Q9Y577 477 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 PPP2R3BQ9Y5P8 575 aa7.89□□□□□ -1.15
CHRNA6-202ENST00000529467 KIAA0100Q14667 2235 aaKnown RBP7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 SSC5DA1L4H1 1573 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 IL16Q14005 1332 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 CLRN2A0PK11 232 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 TESPA1A2RU30 521 aaPredicted RBP7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 F8W031 263 aaPredicted RBP7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 GJA5P36382 358 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 IFIT5Q13325 482 aaKnown RBP7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 FKBP5Q13451 457 aaPredicted RBP7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 SUPT20HL1Q3ZLR7 823 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 BEND3Q5T5X7 828 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 INTS3Q68E01 1043 aaKnown RBP7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 PTPN18Q99952 460 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 A0A1B0GUL6 1792 aa7.88□□□□□ -1.15
CHRNA6-202ENST00000529467 ZBED9Q6R2W3 1325 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms