RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 DDX46Q7L014 1031 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 SYNE4Q8N205 404 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 TFIP11Q9UBB9 837 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 FAM177BA6PVY3 158 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 CIAO1O76071 339 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 CCDC192P0DO97 292 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 MCMDC2Q4G0Z9 681 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 TTLL11Q8NHH1 800 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 IL15P40933 162 aaPredicted RBP18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 Q6ZUG5 572 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 PIBF1Q8WXW3 757 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 NYXQ9GZU5 481 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 EYA2O00167 538 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 PLCB2Q00722 1185 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 CAMK4Q16566 473 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 SASS6Q6UVJ0 657 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 LEO1Q8WVC0 666 aaPredicted RBP18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 SETDB2Q96T68 719 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 SCAND2PQ9GZW5 306 aaPredicted RBP18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 NUP62CLQ9H1M0 184 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 BCL2L12Q9HB09 334 aa18.61■□□□□ 0.57
TM9SF1-208ENST00000529332 ANKRD18BA2A2Z9 1011 aa18.6■□□□□ 0.57
TM9SF1-208ENST00000529332 RBM10P98175 930 aaKnown RBP18.6■□□□□ 0.57
TM9SF1-208ENST00000529332 MAP3K11Q16584 847 aa18.6■□□□□ 0.57
TM9SF1-208ENST00000529332 TBC1D9BQ66K14 1250 aa18.6■□□□□ 0.57
TM9SF1-208ENST00000529332 SMIM5Q71RC9 77 aa18.6■□□□□ 0.57
TM9SF1-208ENST00000529332 SPATA32Q96LK8 384 aa18.6■□□□□ 0.57
TM9SF1-208ENST00000529332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 SLFNL1Q499Z3 407 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 STOX1Q6ZVD7 989 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 ATG9AQ7Z3C6 839 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 C17orf53Q8N3J3 647 aaPredicted RBP18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 KBTBD3Q8NAB2 608 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 MRVI1Q9Y6F6 885 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 ITGA6P23229 1130 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 AMIGO3Q86WK7 504 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 LRRC2Q9BYS8 371 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 GREM2Q9H772 168 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 DACT1Q9NYF0 836 aa18.59■□□□□ 0.57
TM9SF1-208ENST00000529332 CASZ1Q86V15 1759 aa18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 TYRO3Q06418 890 aa18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 RESTQ13127 1097 aa18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 NOLC1Q14978 699 aaKnown RBP eCLIP18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 BICDL1Q6ZP65 573 aa18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 BRF1Q92994 677 aa18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 ZNF594Q96JF6 807 aaPredicted RBP18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 CCDC85AQ96PX6 553 aaPredicted RBP18.58■□□□□ 0.57
TM9SF1-208ENST00000529332 GTF2E1P29083 439 aaPredicted RBP18.58■□□□□ 0.56
TM9SF1-208ENST00000529332 CCDC152Q4G0S7 254 aa18.58■□□□□ 0.56
TM9SF1-208ENST00000529332 PROM2Q8N271 834 aa18.58■□□□□ 0.56
TM9SF1-208ENST00000529332 PGBD1Q96JS3 809 aa18.58■□□□□ 0.56
TM9SF1-208ENST00000529332 PDCL3Q9H2J4 239 aa18.58■□□□□ 0.56
TM9SF1-208ENST00000529332 GPR108Q9NPR9 543 aa18.58■□□□□ 0.56
TM9SF1-208ENST00000529332 RTL9Q8NET4 1388 aa18.57■□□□□ 0.56
TM9SF1-208ENST00000529332 SCRN1Q12765 414 aa18.57■□□□□ 0.56
TM9SF1-208ENST00000529332 CKAP2LQ8IYA6 745 aa18.57■□□□□ 0.56
TM9SF1-208ENST00000529332 FAM200AQ8TCP9 573 aa18.57■□□□□ 0.56
TM9SF1-208ENST00000529332 DDX11Q96FC9 970 aa18.57■□□□□ 0.56
TM9SF1-208ENST00000529332 LRP5O75197 1615 aa18.57■□□□□ 0.56
TM9SF1-208ENST00000529332 GOLIM4O00461 696 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 TIMM10P62072 90 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 NBPF5PQ86XG9 351 aaPredicted RBP18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 NEUROD6Q96NK8 337 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 TNMDQ9H2S6 317 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 LAMA4Q16363 1823 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 CARMIL3Q8ND23 1372 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 GOLGA6L4A6NEF3 574 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 KCNF1Q9H3M0 494 aa18.56■□□□□ 0.56
TM9SF1-208ENST00000529332 LRRC24Q50LG9 513 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 TPTE2Q6XPS3 522 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 RBM43Q6ZSC3 357 aaKnown RBP18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 CLSTN2Q9H4D0 955 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 SPTLC3Q9NUV7 552 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 PAG1Q9NWQ8 432 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 FAM13BQ9NYF5 915 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 CEP126Q9P2H0 1117 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 A0A0G2JLW4 131 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 DYNC1I1O14576 645 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 NR1I2O75469 434 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 ERFEQ4G0M1 354 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 LDHAL6AQ6ZMR3 332 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 LUZP1Q86V48 1076 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 SMARCC2Q8TAQ2 1214 aa18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 DDX19AQ9NUU7 478 aaKnown RBP18.55■□□□□ 0.56
TM9SF1-208ENST00000529332 PFKFB2O60825 505 aa18.54■□□□□ 0.56
TM9SF1-208ENST00000529332 DNTTIP2Q5QJE6 756 aaKnown RBP18.54■□□□□ 0.56
TM9SF1-208ENST00000529332 SPC24Q8NBT2 197 aa18.54■□□□□ 0.56
TM9SF1-208ENST00000529332 CNNM1Q9NRU3 951 aa18.54■□□□□ 0.56
TM9SF1-208ENST00000529332 HELLSQ9NRZ9 838 aa18.54■□□□□ 0.56
TM9SF1-208ENST00000529332 AKAP2Q9Y2D5 859 aa18.54■□□□□ 0.56
TM9SF1-208ENST00000529332 ANO6Q4KMQ2 910 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 SLC10A5Q5PT55 438 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 DHX32Q7L7V1 743 aaKnown RBP18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 PUS3Q9BZE2 481 aaKnown RBP18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 TFCP2L1Q9NZI6 479 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 SPEF2Q9C093 1822 aa18.53■□□□□ 0.56
TM9SF1-208ENST00000529332 H3BQV1 296 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms