RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 HHIPQ96QV1 700 aa8.29□□□□□ -1.08
CSDE1-212ENST00000529046 OSMRQ99650 979 aa8.29□□□□□ -1.08
CSDE1-212ENST00000529046 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
CSDE1-212ENST00000529046 CARD10Q9BWT7 1032 aa8.29□□□□□ -1.08
CSDE1-212ENST00000529046 SMARCA2P51531 1590 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-212ENST00000529046 H3BRJ5 948 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 FSCN2O14926 492 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 H2AFB1P0C5Y9 115 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 H2AFB2P0C5Z0 115 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 ITGB7P26010 798 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 CD68P34810 354 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-212ENST00000529046 FMR1Q06787 632 aaKnown RBP eCLIP8.28□□□□□ -1.082e-19■□□□□ 8.5
CSDE1-212ENST00000529046 NPAS4Q8IUM7 802 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 ZSCAN29Q8IWY8 852 aaPredicted RBP8.28□□□□□ -1.08
CSDE1-212ENST00000529046 KLHL23Q8NBE8 558 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 MEGF10Q96KG7 1140 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 ZFYVE28Q9HCC9 887 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 HMGXB3Q12766 1538 aa8.28□□□□□ -1.08
CSDE1-212ENST00000529046 ALX3O95076 343 aa8.27□□□□□ -1.09
CSDE1-212ENST00000529046 FOXD4L6Q3SYB3 417 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-212ENST00000529046 FOXD4L3Q6VB84 417 aaPredicted RBP8.27□□□□□ -1.09
CSDE1-212ENST00000529046 RGS22Q8NE09 1264 aa8.27□□□□□ -1.09
CSDE1-212ENST00000529046 SEC31BQ9NQW1 1179 aa8.27□□□□□ -1.09
CSDE1-212ENST00000529046 CUX2O14529 1486 aa8.26□□□□□ -1.09
CSDE1-212ENST00000529046 PIP4K2BP78356 416 aa8.26□□□□□ -1.09
CSDE1-212ENST00000529046 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.26□□□□□ -1.09
CSDE1-212ENST00000529046 AGGF1Q8N302 714 aaeCLIP8.26□□□□□ -1.09
CSDE1-212ENST00000529046 WNT8BQ93098 351 aa8.26□□□□□ -1.09
CSDE1-212ENST00000529046 NXPE3Q969Y0 559 aa8.26□□□□□ -1.09
CSDE1-212ENST00000529046 PODXL2Q9NZ53 605 aa8.26□□□□□ -1.09
CSDE1-212ENST00000529046 SOX13Q9UN79 622 aa8.26□□□□□ -1.09
CSDE1-212ENST00000529046 SMARCA4P51532 1647 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 ANKRD33BA6NCL7 494 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 TM4SF5O14894 197 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 POLR3DP05423 398 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-212ENST00000529046 NEFLP07196 543 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 ACAD11Q709F0 780 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 BSNDQ8WZ55 320 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 LATS2Q9NRM7 1088 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 KCNK4Q9NYG8 393 aa8.25□□□□□ -1.09
CSDE1-212ENST00000529046 BAZ1AQ9NRL2 1556 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-212ENST00000529046 PEG3Q9GZU2 1588 aa8.24□□□□□ -1.09
CSDE1-212ENST00000529046 WISP1O95388 367 aa8.24□□□□□ -1.09
CSDE1-212ENST00000529046 PEAR1Q5VY43 1037 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-212ENST00000529046 DZIP1LQ8IYY4 767 aaKnown RBP8.24□□□□□ -1.09
CSDE1-212ENST00000529046 ASAP3Q8TDY4 903 aa8.24□□□□□ -1.09
CSDE1-212ENST00000529046 SLC7A3Q8WY07 619 aa8.24□□□□□ -1.09
CSDE1-212ENST00000529046 KLHDC7BQ96G42 594 aa8.24□□□□□ -1.09
CSDE1-212ENST00000529046 DNAJC25Q9H1X3 360 aa8.24□□□□□ -1.09
CSDE1-212ENST00000529046 OSGEPQ9NPF4 335 aa8.24□□□□□ -1.09
CSDE1-212ENST00000529046 CCDC9Q9Y3X0 531 aaKnown RBP8.24□□□□□ -1.09
CSDE1-212ENST00000529046 GLB1P16278 677 aa8.23□□□□□ -1.09
CSDE1-212ENST00000529046 DUOXA2Q1HG44 320 aa8.23□□□□□ -1.09
CSDE1-212ENST00000529046 PRSS36Q5K4E3 855 aa8.23□□□□□ -1.09
CSDE1-212ENST00000529046 Q6ZS46 218 aa8.23□□□□□ -1.09
CSDE1-212ENST00000529046 FBXO33Q7Z6M2 555 aa8.23□□□□□ -1.09
CSDE1-212ENST00000529046 BHLHE41Q9C0J9 482 aaPredicted RBP8.23□□□□□ -1.09
CSDE1-212ENST00000529046 DDX3YO15523 660 aaKnown RBP8.22□□□□□ -1.09
CSDE1-212ENST00000529046 ADAM11O75078 769 aa8.22□□□□□ -1.09
CSDE1-212ENST00000529046 ARL4DP49703 201 aa8.22□□□□□ -1.09
CSDE1-212ENST00000529046 ENOX2Q16206 610 aaKnown RBP8.22□□□□□ -1.09
CSDE1-212ENST00000529046 GALNT12Q8IXK2 581 aa8.22□□□□□ -1.09
CSDE1-212ENST00000529046 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
CSDE1-212ENST00000529046 FOXD4L4Q8WXT5 416 aaPredicted RBP8.22□□□□□ -1.09
CSDE1-212ENST00000529046 P4HBP07237 508 aaKnown RBP8.21□□□□□ -1.1
CSDE1-212ENST00000529046 NLRP12P59046 1061 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 PLCB3Q01970 1234 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 C19orf57Q0VDD7 668 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 IKBKEQ14164 716 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 ZMYM1Q5SVZ6 1142 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 VN1R5Q7Z5H4 357 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 UBASH3BQ8TF42 649 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 CEP41Q9BYV8 373 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 NIF3L1Q9GZT8 377 aa8.21□□□□□ -1.1
CSDE1-212ENST00000529046 ORC1Q13415 861 aa8.2□□□□□ -1.1
CSDE1-212ENST00000529046 USPL1Q5W0Q7 1092 aa8.2□□□□□ -1.1
CSDE1-212ENST00000529046 PRR23CQ6ZRP0 262 aa8.2□□□□□ -1.1
CSDE1-212ENST00000529046 KIAA1211Q6ZU35 1233 aa8.2□□□□□ -1.1
CSDE1-212ENST00000529046 CSRNP1Q96S65 589 aa8.2□□□□□ -1.1
CSDE1-212ENST00000529046 A0A1W2PP55 124 aa8.19□□□□□ -1.1
CSDE1-212ENST00000529046 METTL12A8MUP2 240 aa8.19□□□□□ -1.1
CSDE1-212ENST00000529046 EIF1AYO14602 144 aaKnown RBP8.19□□□□□ -1.1
CSDE1-212ENST00000529046 CPNE3O75131 537 aaKnown RBP8.19□□□□□ -1.1
CSDE1-212ENST00000529046 LIN7BQ9HAP6 207 aa8.19□□□□□ -1.1
CSDE1-212ENST00000529046 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
CSDE1-212ENST00000529046 BAZ1BQ9UIG0 1483 aaKnown RBP8.19□□□□□ -1.1
CSDE1-212ENST00000529046 SOX1O00570 391 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-212ENST00000529046 HGSNATQ68CP4 663 aa8.18□□□□□ -1.1
CSDE1-212ENST00000529046 CCNJLQ8IV13 435 aa8.18□□□□□ -1.1
CSDE1-212ENST00000529046 UBL7Q96S82 380 aaPredicted RBP8.18□□□□□ -1.1
CSDE1-212ENST00000529046 FBF1Q8TES7 1133 aa8.17□□□□□ -1.1
CSDE1-212ENST00000529046 RNF208Q9H0X6 261 aa8.17□□□□□ -1.1
CSDE1-212ENST00000529046 SOX17Q9H6I2 414 aaPredicted RBP8.17□□□□□ -1.1
CSDE1-212ENST00000529046 NPHS2Q9NP85 383 aa8.17□□□□□ -1.1
CSDE1-212ENST00000529046 A0A096LPE4 126 aa8.16□□□□□ -1.1
CSDE1-212ENST00000529046 A0A1W2PPZ6 126 aa8.16□□□□□ -1.1
CSDE1-212ENST00000529046 RBM47A0AV96 593 aaKnown RBP8.16□□□□□ -1.1
CSDE1-212ENST00000529046 ESRRAP11474 423 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-212ENST00000529046 UVSSAQ2YD98 709 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms