RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, human

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN22-208	ENST00000529045	LILRA1	O75019	489 aa		9.07	□□□□□ -0.96
PTPN22-208	ENST00000529045	ZNF445	P59923	1031 aa		9.07	□□□□□ -0.96
PTPN22-208	ENST00000529045	ZNF211	Q13398	564 aa	Predicted RBP	9.07	□□□□□ -0.96
PTPN22-208	ENST00000529045	DZIP1L	Q8IYY4	767 aa	Known RBP	9.07	□□□□□ -0.96
PTPN22-208	ENST00000529045	MPND	Q8N594	471 aa		9.07	□□□□□ -0.96
PTPN22-208	ENST00000529045	GMPR2	Q9P2T1	348 aa	Known RBP	9.07	□□□□□ -0.96
PTPN22-208	ENST00000529045	EGFL7	Q9UHF1	273 aa		9.07	□□□□□ -0.96
PTPN22-208	ENST00000529045	FMN2	Q9NZ56	1722 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	WASL	O00401	505 aa	Predicted RBP	9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	ZNF500	O60304	480 aa	Predicted RBP	9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	MSN	P26038	577 aa	Known RBP	9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	EPHA4	P54764	986 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	GDF10	P55107	478 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	ECM1	Q16610	540 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	CTC1	Q2NKJ3	1217 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	KLHL40	Q2TBA0	621 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	HPS1	Q92902	700 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	TNPO1	Q92973	898 aa	Known RBP	9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	MKNK1	Q9BUB5	465 aa		9.06	□□□□□ -0.96
PTPN22-208	ENST00000529045	ERBB4	Q15303	1308 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	SPATA31A3	Q5VYP0	1347 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	TNS3	Q68CZ2	1445 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	CASZ1	Q86V15	1759 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	IPO8	O15397	1037 aa	Known RBP	9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	ADH1C	P00326	375 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	NR3C2	P08235	984 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	HSP90AB1	P08238	724 aa	Known RBP	9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	RLBP1	P12271	317 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	NASP	P49321	788 aa	Predicted RBP	9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	SMCP	P49901	116 aa	Predicted RBP	9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	BMP2KL	Q5H9B9	411 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	KIAA1211	Q6ZU35	1233 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	FTSJ3	Q8IY81	847 aa	Known RBP	9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	ETNK1	Q9HBU6	452 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	ANO2	Q9NQ90	1003 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	KNDC1	Q76NI1	1749 aa		9.05	□□□□□ -0.96
PTPN22-208	ENST00000529045	ARHGEF10	O15013	1369 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	ROBO2	Q9HCK4	1378 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045		H3BRB1	525 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	ICMT	O60725	284 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	ABL1	P00519	1130 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	NUCB2	P80303	420 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	TCP11L2	Q8N4U5	519 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	CAMKK2	Q96RR4	588 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	TUT1	Q9H6E5	874 aa	Known RBP	9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	QRICH2	Q9H0J4	1663 aa		9.04	□□□□□ -0.96
PTPN22-208	ENST00000529045	NRK	Q7Z2Y5	1582 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045		K7ELQ4	463 aa	Predicted RBP	9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	DYNC1I1	O14576	645 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	KCNQ2	O43526	872 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	C21orf2	O43822	256 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	ALDH1A1	P00352	501 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	ADD1	P35611	737 aa	Known RBP	9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	NUCB1	Q02818	461 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	DHX9	Q08211	1270 aa	Known RBP	9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	ESCO1	Q5FWF5	840 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	SMAP1	Q8IYB5	467 aa	Predicted RBP	9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	CCDC116	Q8IYX3	515 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	TNS4	Q8IZW8	715 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	GTF3C2	Q8WUA4	911 aa	Predicted RBP	9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	GCC1	Q96CN9	775 aa		9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	NOL7	Q9UMY1	257 aa	Known RBP	9.03	□□□□□ -0.96
PTPN22-208	ENST00000529045	ANKRD26	Q9UPS8	1709 aa		9.02	□□□□□ -0.96
PTPN22-208	ENST00000529045	INHA	P05111	366 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	IGFBP4	P22692	258 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	MTMR3	Q13615	1198 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	EZH2	Q15910	746 aa	Known RBP	9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	ALDH1L2	Q3SY69	923 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	MORC1	Q86VD1	984 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	GAS2L3	Q86XJ1	694 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	PDLIM2	Q96JY6	352 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	CWC22	Q9HCG8	908 aa	Known RBP	9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	BIN2	Q9UBW5	565 aa	Predicted RBP	9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	NSD3	Q9BZ95	1437 aa		9.02	□□□□□ -0.97
PTPN22-208	ENST00000529045	DLC1	Q96QB1	1528 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	UNCX	A6NJT0	531 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	FOXO3	O43524	673 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	MARS	P56192	900 aa	Known RBP	9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	PPIP5K1	Q6PFW1	1433 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	ATF7IP	Q6VMQ6	1270 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	FAM196A	Q6ZSG2	479 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	ZBTB40	Q9NUA8	1239 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	SERTAD1	Q9UHV2	236 aa		9.01	□□□□□ -0.97
PTPN22-208	ENST00000529045	SBNO1	A3KN83	1393 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	TECPR2	O15040	1411 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	PPL	O60437	1756 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	RBM47	A0AV96	593 aa	Known RBP	9	□□□□□ -0.97
PTPN22-208	ENST00000529045	FOXK2	Q01167	660 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	NR5A1	Q13285	461 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	RABEP1	Q15276	862 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	SCG3	Q8WXD2	468 aa	Known RBP	9	□□□□□ -0.97
PTPN22-208	ENST00000529045	COL26A1	Q96A83	441 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	SLC4A9	Q96Q91	983 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	ATP13A2	Q9NQ11	1180 aa		9	□□□□□ -0.97
PTPN22-208	ENST00000529045	KIF24	Q5T7B8	1368 aa		8.99	□□□□□ -0.97
PTPN22-208	ENST00000529045	PTCD1	O75127	700 aa	Known RBP	8.99	□□□□□ -0.97
PTPN22-208	ENST00000529045	BAG4	O95429	457 aa	Known RBP	8.99	□□□□□ -0.97

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms