RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 SUPT20HQ8NEM7 779 aa30.01■■■□□ 2.39
LDLRAD3-203ENST00000528989 COA1Q9GZY4 146 aa30.01■■■□□ 2.39
LDLRAD3-203ENST00000528989 DENND2AQ9ULE3 1009 aa30.01■■■□□ 2.39
LDLRAD3-203ENST00000528989 PPIP5K2O43314 1243 aa30■■■□□ 2.39
LDLRAD3-203ENST00000528989 FSD1Q9BTV5 496 aa30■■■□□ 2.39
LDLRAD3-203ENST00000528989 KCNQ5Q9NR82 932 aa30■■■□□ 2.39
LDLRAD3-203ENST00000528989 SLFNL1Q499Z3 407 aa29.99■■■□□ 2.39
LDLRAD3-203ENST00000528989 PELP1Q8IZL8 1130 aaKnown RBP29.99■■■□□ 2.39
LDLRAD3-203ENST00000528989 KBTBD3Q8NAB2 608 aa29.99■■■□□ 2.39
LDLRAD3-203ENST00000528989 TAOK3Q9H2K8 898 aa29.99■■■□□ 2.39
LDLRAD3-203ENST00000528989 G3V3G9 751 aa29.98■■■□□ 2.39
LDLRAD3-203ENST00000528989 SEMA3EO15041 775 aa29.98■■■□□ 2.39
LDLRAD3-203ENST00000528989 DCAF8Q5TAQ9 597 aa29.98■■■□□ 2.39
LDLRAD3-203ENST00000528989 CDC45O75419 566 aa29.97■■■□□ 2.39
LDLRAD3-203ENST00000528989 YBX3P16989 372 aaKnown RBP eCLIP29.97■■■□□ 2.39
LDLRAD3-203ENST00000528989 CHMLP26374 656 aa29.97■■■□□ 2.39
LDLRAD3-203ENST00000528989 RASSF7Q02833 373 aa29.97■■■□□ 2.39
LDLRAD3-203ENST00000528989 ABCF2Q9UG63 623 aa29.97■■■□□ 2.39
LDLRAD3-203ENST00000528989 ECE2O60344 883 aa29.95■■■□□ 2.39
LDLRAD3-203ENST00000528989 PRELPP51888 382 aa29.95■■■□□ 2.39
LDLRAD3-203ENST00000528989 IDH1O75874 414 aaKnown RBP29.95■■■□□ 2.38
LDLRAD3-203ENST00000528989 GTF2IP78347 998 aa29.95■■■□□ 2.38
LDLRAD3-203ENST00000528989 LARGE2Q8N3Y3 721 aa29.95■■■□□ 2.38
LDLRAD3-203ENST00000528989 SEC24BO95487 1268 aa29.94■■■□□ 2.38
LDLRAD3-203ENST00000528989 TTF1Q15361 905 aaPredicted RBP29.94■■■□□ 2.38
LDLRAD3-203ENST00000528989 ARHGAP27Q6ZUM4 889 aa29.94■■■□□ 2.38
LDLRAD3-203ENST00000528989 IARSP41252 1262 aaKnown RBP29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 PODNQ7Z5L7 613 aa29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 CHD4Q14839 1912 aa29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 COL4A5P29400 1685 aa29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 YDJCA8MPS7 323 aa29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 FBXW7Q969H0 707 aa29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 BACH2Q9BYV9 841 aa29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 IL25Q9H293 177 aa29.93■■■□□ 2.38
LDLRAD3-203ENST00000528989 FER1L6Q2WGJ9 1857 aa29.92■■■□□ 2.38
LDLRAD3-203ENST00000528989 GRIK5Q16478 980 aa29.92■■■□□ 2.38
LDLRAD3-203ENST00000528989 CWC27Q6UX04 472 aaKnown RBP29.92■■■□□ 2.38
LDLRAD3-203ENST00000528989 FAM227BQ96M60 508 aa29.92■■■□□ 2.38
LDLRAD3-203ENST00000528989 LRP2BPQ9P2M1 347 aa29.92■■■□□ 2.38
LDLRAD3-203ENST00000528989 PDS5AQ29RF7 1337 aaKnown RBP29.92■■■□□ 2.38
LDLRAD3-203ENST00000528989 ZBTB22O15209 634 aa29.91■■■□□ 2.38
LDLRAD3-203ENST00000528989 TTLL5Q6EMB2 1281 aa29.91■■■□□ 2.38
LDLRAD3-203ENST00000528989 MXD3Q9BW11 206 aa29.91■■■□□ 2.38
LDLRAD3-203ENST00000528989 PRDX5P30044 214 aa29.91■■■□□ 2.38
LDLRAD3-203ENST00000528989 ARFGEF1Q9Y6D6 1849 aa29.91■■■□□ 2.38
LDLRAD3-203ENST00000528989 SLC9C2Q5TAH2 1124 aa29.9■■■□□ 2.38
LDLRAD3-203ENST00000528989 WDR66Q8TBY9 1149 aa29.9■■■□□ 2.38
LDLRAD3-203ENST00000528989 DIAPH3Q9NSV4 1193 aa29.89■■■□□ 2.38
LDLRAD3-203ENST00000528989 NMIQ13287 307 aaPredicted RBP29.89■■■□□ 2.37
LDLRAD3-203ENST00000528989 SEC62Q99442 399 aaKnown RBP29.89■■■□□ 2.37
LDLRAD3-203ENST00000528989 VPS33BQ9H267 617 aa29.89■■■□□ 2.37
LDLRAD3-203ENST00000528989 MYO5AQ9Y4I1 1855 aaKnown RBP29.88■■■□□ 2.37
LDLRAD3-203ENST00000528989 A0A0D9SFI3 127 aa29.88■■■□□ 2.37
LDLRAD3-203ENST00000528989 MFSD14BQ5SR56 506 aa29.88■■■□□ 2.37
LDLRAD3-203ENST00000528989 RAI14Q9P0K7 980 aa29.88■■■□□ 2.37
LDLRAD3-203ENST00000528989 AK9Q5TCS8 1911 aa29.88■■■□□ 2.37
LDLRAD3-203ENST00000528989 FAM205AQ6ZU69 1335 aa29.88■■■□□ 2.37
LDLRAD3-203ENST00000528989 LTBP3Q9NS15 1303 aa29.88■■■□□ 2.37
LDLRAD3-203ENST00000528989 RNF113AO15541 343 aaKnown RBP29.87■■■□□ 2.37
LDLRAD3-203ENST00000528989 ZNF384Q8TF68 577 aa29.87■■■□□ 2.37
LDLRAD3-203ENST00000528989 MAP3K12Q12852 859 aa29.87■■■□□ 2.37
LDLRAD3-203ENST00000528989 CASC1Q6TDU7 716 aa29.87■■■□□ 2.37
LDLRAD3-203ENST00000528989 CERS5Q8N5B7 392 aa29.87■■■□□ 2.37
LDLRAD3-203ENST00000528989 MAGEB6Q8N7X4 407 aa29.87■■■□□ 2.37
LDLRAD3-203ENST00000528989 PDE6AP16499 860 aa29.86■■■□□ 2.37
LDLRAD3-203ENST00000528989 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.86■■■□□ 2.37
LDLRAD3-203ENST00000528989 SALL1Q9NSC2 1324 aa29.86■■■□□ 2.37
LDLRAD3-203ENST00000528989 ADD2P35612 726 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 ERICH6Q7L0X2 663 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 NIM1KQ8IY84 436 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 ESYT1Q9BSJ8 1104 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 MYH13Q9UKX3 1938 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 SCN9AQ15858 1988 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 RAD17O75943 681 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 GPR162Q16538 588 aa29.85■■■□□ 2.37
LDLRAD3-203ENST00000528989 TCRBV5S4A2TA0A5A2 114 aa29.84■■■□□ 2.37
LDLRAD3-203ENST00000528989 MECOMQ03112 1051 aa29.84■■■□□ 2.37
LDLRAD3-203ENST00000528989 OSBP2Q969R2 916 aa29.84■■■□□ 2.37
LDLRAD3-203ENST00000528989 ZNRF3Q9ULT6 936 aa29.84■■■□□ 2.37
LDLRAD3-203ENST00000528989 ZNF532Q9HCE3 1301 aa29.84■■■□□ 2.37
LDLRAD3-203ENST00000528989 USP17L3A6NCW0 530 aa29.83■■■□□ 2.37
LDLRAD3-203ENST00000528989 USP17L4A6NCW7 530 aa29.83■■■□□ 2.37
LDLRAD3-203ENST00000528989 HIP1O00291 1037 aa29.83■■■□□ 2.37
LDLRAD3-203ENST00000528989 STRIP1Q5VSL9 837 aa29.83■■■□□ 2.37
LDLRAD3-203ENST00000528989 USP17L1Q7RTZ2 530 aa29.83■■■□□ 2.37
LDLRAD3-203ENST00000528989 JDP2Q8WYK2 163 aa29.83■■■□□ 2.37
LDLRAD3-203ENST00000528989 LDHBP07195 334 aaKnown RBP29.82■■■□□ 2.37
LDLRAD3-203ENST00000528989 ZMYM1Q5SVZ6 1142 aa29.82■■■□□ 2.37
LDLRAD3-203ENST00000528989 DACT2Q5SW24 774 aa29.82■■■□□ 2.37
LDLRAD3-203ENST00000528989 ADGRA1Q86SQ6 560 aa29.82■■■□□ 2.37
LDLRAD3-203ENST00000528989 NSUN4Q96CB9 384 aaKnown RBP29.82■■■□□ 2.37
LDLRAD3-203ENST00000528989 PUS7LQ9H0K6 701 aaKnown RBP29.82■■■□□ 2.37
LDLRAD3-203ENST00000528989 RFX7Q2KHR2 1363 aa29.82■■■□□ 2.36
LDLRAD3-203ENST00000528989 CCDC129Q6ZRS4 1044 aa29.82■■■□□ 2.36
LDLRAD3-203ENST00000528989 ZGPATQ8N5A5 531 aaKnown RBP29.82■■■□□ 2.36
LDLRAD3-203ENST00000528989 TBC1D22AQ8WUA7 517 aa29.82■■■□□ 2.36
LDLRAD3-203ENST00000528989 SGSM2O43147 1006 aa29.81■■■□□ 2.36
LDLRAD3-203ENST00000528989 ZFYP08048 801 aaPredicted RBP29.81■■■□□ 2.36
LDLRAD3-203ENST00000528989 MFAP1P55081 439 aaKnown RBP29.81■■■□□ 2.36
LDLRAD3-203ENST00000528989 ZNF589Q86UQ0 364 aaPredicted RBP29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms