RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 VAMP4O75379 141 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 CCDC175P0C221 793 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 GNA11P29992 359 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 ACTN2P35609 894 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 GNG11P61952 73 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 ASIC1P78348 528 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 KIAA0753Q2KHM9 967 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 CREB3L3Q68CJ9 461 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 TPTE2Q6XPS3 522 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 GCC2Q8IWJ2 1684 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 TRMT1LQ7Z2T5 733 aaKnown RBP9.64□□□□□ -0.87
CTNND1-219ENST00000528621 AOPEPQ8N6M6 819 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 PABPN1LA6NDY0 278 aaKnown RBP9.64□□□□□ -0.87
CTNND1-219ENST00000528621 SPTLC2O15270 562 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 NSRP1Q9H0G5 558 aaKnown RBP9.64□□□□□ -0.87
CTNND1-219ENST00000528621 ATP10AO60312 1499 aa9.64□□□□□ -0.87
CTNND1-219ENST00000528621 CTAGE15A4D2H0 777 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 PHACTR2O75167 634 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 TACC1O75410 805 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 CTAGE8P0CG41 777 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 SPECC1Q5M775 1068 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 CTAGE6Q86UF2 777 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 CTAGE4Q8IX94 777 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 C19orf44Q9H6X5 657 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
CTNND1-219ENST00000528621 PCDHB15Q9Y5E8 787 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 KIF4AO95239 1232 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 RAB3GAP1Q15042 981 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 DHX32Q7L7V1 743 aaKnown RBP9.63□□□□□ -0.87
CTNND1-219ENST00000528621 DHX58Q96C10 678 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 BICC1Q9H694 974 aaKnown RBP9.63□□□□□ -0.87
CTNND1-219ENST00000528621 HOMER2Q9NSB8 354 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 IQSEC3Q9UPP2 1182 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-219ENST00000528621 COMMD10Q9Y6G5 202 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 FAM13AO94988 1023 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 C16orf71Q8IYS4 520 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-219ENST00000528621 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 PPM1EQ8WY54 764 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 IKBKGQ9Y6K9 419 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 SPDYE3A6NKU9 549 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 OPA1O60313 960 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 FERP16591 822 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 MARCKSP29966 332 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-219ENST00000528621 KRT79Q5XKE5 535 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 APBB1IPQ7Z5R6 666 aaPredicted RBP9.63□□□□□ -0.87
CTNND1-219ENST00000528621 C8orf37Q96NL8 207 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 ZRANB1Q9UGI0 708 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 MRVI1Q9Y6F6 885 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 ARHGEF10O15013 1369 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 AKR1B10O60218 316 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 NFATC2IPQ8NCF5 419 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 ZBTB40Q9NUA8 1239 aa9.63□□□□□ -0.87
CTNND1-219ENST00000528621 HCLS1P14317 486 aaPredicted RBP9.62□□□□□ -0.87
CTNND1-219ENST00000528621 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 PARP10Q53GL7 1025 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 SH2D4AQ9H788 454 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 AK2P54819 239 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 C8orf34Q49A92 452 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 MSANTD4Q8NCY6 345 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 LLPHQ9BRT6 129 aaKnown RBP9.62□□□□□ -0.87
CTNND1-219ENST00000528621 LDHBP07195 334 aaKnown RBP9.62□□□□□ -0.87
CTNND1-219ENST00000528621 DNM1Q05193 864 aaKnown RBP9.62□□□□□ -0.87
CTNND1-219ENST00000528621 C6orf163Q5TEZ5 329 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 PLBD2Q8NHP8 589 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 SPAG5Q96R06 1193 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 PZPP20742 1482 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 GLT8D2Q9H1C3 349 aa9.62□□□□□ -0.87
CTNND1-219ENST00000528621 CTAGE9A4FU28 777 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 CEP63Q96MT8 703 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 MCM9Q9NXL9 1143 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 ELP1O95163 1332 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 ARHGEF5Q12774 1597 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 TUBBP07437 444 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 PARP1P09874 1014 aaKnown RBP9.61□□□□□ -0.87
CTNND1-219ENST00000528621 MCM7P33993 719 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 TMEM87BQ96K49 555 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 CCDC77Q9BR77 488 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 IMPG2Q9BZV3 1241 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 DNAJC25Q9H1X3 360 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 MAST3O60307 1309 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 ZMYM3Q14202 1370 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 A0A1W2PRG0 241 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 PTPDC1A2A3K4 754 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 SYT1P21579 422 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 CHMLP26374 656 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 TRIM14Q14142 442 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
CTNND1-219ENST00000528621 PLEKHM2Q8IWE5 1019 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 MIGA1Q8NAN2 632 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 TBX22Q9Y458 520 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 KRT86O43790 486 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 TNNI2P48788 182 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 NCBP1Q09161 790 aaKnown RBP9.61□□□□□ -0.87
CTNND1-219ENST00000528621 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
CTNND1-219ENST00000528621 VEZTQ9HBM0 779 aa9.61□□□□□ -0.87
CTNND1-219ENST00000528621 SKILP12757 684 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 TUBB2AQ13885 445 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 TUBB2BQ9BVA1 445 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
CTNND1-219ENST00000528621 SSX2IPQ9Y2D8 614 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms