RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 XAGE2Q96GT9 111 aa7.6□□□□□ -1.19
MACF1-228ENST00000528611 MRIQ9BWK5 157 aa7.6□□□□□ -1.19
MACF1-228ENST00000528611 DENND2AQ9ULE3 1009 aa7.6□□□□□ -1.19
MACF1-228ENST00000528611 BCS1LQ9Y276 419 aa7.6□□□□□ -1.19
MACF1-228ENST00000528611 GTF3C3Q9Y5Q9 886 aa7.6□□□□□ -1.19
MACF1-228ENST00000528611 ARAP2Q8WZ64 1704 aa7.6□□□□□ -1.19
MACF1-228ENST00000528611 A0A1B0GUL6 1792 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 MYO3BQ8WXR4 1341 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 C6orf229H3BNL8 230 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 UFL1O94874 794 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 MX1P20591 662 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 LMNB1P20700 586 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 IARSP41252 1262 aaKnown RBP7.59□□□□□ -1.19
MACF1-228ENST00000528611 GORABQ5T7V8 394 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 AACSQ86V21 672 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 VPS37DQ86XT2 251 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 CERS3Q8IU89 383 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 NLGN2Q8NFZ4 835 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 TDRD7Q8NHU6 1098 aaKnown RBP7.59□□□□□ -1.19
MACF1-228ENST00000528611 WDR66Q8TBY9 1149 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 JDP2Q8WYK2 163 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 FAM84BQ96KN1 310 aaPredicted RBP7.59□□□□□ -1.19
MACF1-228ENST00000528611 POLLQ9UGP5 575 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 SPEF2Q9C093 1822 aa7.59□□□□□ -1.19
MACF1-228ENST00000528611 FAM205AQ6ZU69 1335 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 TAF5LO75529 589 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 MAP4K4O95819 1239 aaPredicted RBP7.58□□□□□ -1.2
MACF1-228ENST00000528611 PDE1AP54750 535 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 TIMM10P62072 90 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 STRIP1Q5VSL9 837 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 SPTY2D1Q68D10 685 aaPredicted RBP7.58□□□□□ -1.2
MACF1-228ENST00000528611 CCDC102BQ68D86 513 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 B4GALNT3Q6L9W6 998 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 KLHL34Q8N239 644 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 NEUROD6Q96NK8 337 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 CD209Q9NNX6 404 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 DBNLQ9UJU6 430 aaKnown RBP7.58□□□□□ -1.2
MACF1-228ENST00000528611 ZNRF3Q9ULT6 936 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 RFX7Q2KHR2 1363 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 TAF1P21675 1872 aa7.58□□□□□ -1.2
MACF1-228ENST00000528611 G3V3G9 751 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 HIP1O00291 1037 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 PPIP5K2O43314 1243 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 ZFYP08048 801 aaPredicted RBP7.57□□□□□ -1.2
MACF1-228ENST00000528611 RPS12P25398 132 aaKnown RBP7.57□□□□□ -1.2
MACF1-228ENST00000528611 HDLBPQ00341 1268 aaKnown RBP7.57□□□□□ -1.2
MACF1-228ENST00000528611 TNIP1Q15025 636 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 BMP2KLQ5H9B9 411 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 TTC39AQ5SRH9 613 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 DCAF8Q5TAQ9 597 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 ZSCAN25Q6NSZ9 544 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 PLEKHM2Q8IWE5 1019 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 CDAN1Q8IWY9 1227 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 SLF2Q8IX21 1173 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 EVI5LQ96CN4 794 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 HAUS7Q99871 368 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 LNPKQ9C0E8 428 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 IL1RAPL2Q9NP60 686 aa7.57□□□□□ -1.2
MACF1-228ENST00000528611 MAST3O60307 1309 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 FZD9O00144 591 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 NFKBIEO00221 500 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 EPB41L2O43491 1005 aaKnown RBP7.56□□□□□ -1.2
MACF1-228ENST00000528611 GPR162Q16538 588 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 NIM1KQ8IY84 436 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 LARGE2Q8N3Y3 721 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 SPATA5Q8NB90 893 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 AGBL3Q8NEM8 1001 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 HELBQ8NG08 1087 aaPredicted RBP7.56□□□□□ -1.2
MACF1-228ENST00000528611 PI4K2BQ8TCG2 481 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 DPF2Q92785 391 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.56□□□□□ -1.2
MACF1-228ENST00000528611 CCDC8Q9H0W5 538 aaPredicted RBP7.56□□□□□ -1.2
MACF1-228ENST00000528611 TAOK2Q9UL54 1235 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 TRPC6Q9Y210 931 aa7.56□□□□□ -1.2
MACF1-228ENST00000528611 DICER1Q9UPY3 1922 aaKnown RBP7.56□□□□□ -1.2
MACF1-228ENST00000528611 CACNA1SQ13698 1873 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 COL4A1P02462 1669 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 USP17L3A6NCW0 530 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 USP17L4A6NCW7 530 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 FRAT2O75474 233 aaPredicted RBP7.55□□□□□ -1.2
MACF1-228ENST00000528611 LDHCP07864 332 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 VIL1P09327 827 aaKnown RBP7.55□□□□□ -1.2
MACF1-228ENST00000528611 EIF6P56537 245 aaKnown RBP7.55□□□□□ -1.2
MACF1-228ENST00000528611 MAP3K12Q12852 859 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 TTLL5Q6EMB2 1281 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 DPY19L2Q6NUT2 758 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 ARHGAP27Q6ZUM4 889 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 USP17L1Q7RTZ2 530 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 CNTROBQ8N137 903 aa7.55□□□□□ -1.2
MACF1-228ENST00000528611 APBB1O00213 710 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 MAP3K13O43283 966 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 ECE2O60344 883 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 YBX3P16989 372 aaKnown RBP eCLIP7.54□□□□□ -1.2
MACF1-228ENST00000528611 PHKA1P46020 1223 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 GYG1P46976 350 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 BCAMP50895 628 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 GSTO1P78417 241 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 RASGRF1Q13972 1273 aa7.54□□□□□ -1.2
MACF1-228ENST00000528611 UBE3CQ15386 1083 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms