RNA–Protein interactions for RNA: ENST00000528462.5

PACSIN3-205, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 1,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-205ENST00000528462 FRAT2O75474 233 aaPredicted RBP26.8■■□□□ 1.88
PACSIN3-205ENST00000528462 BMP2KLQ5H9B9 411 aa26.8■■□□□ 1.88
PACSIN3-205ENST00000528462 JDP2Q8WYK2 163 aa26.8■■□□□ 1.88
PACSIN3-205ENST00000528462 IQSEC3Q9UPP2 1182 aaPredicted RBP26.8■■□□□ 1.88
PACSIN3-205ENST00000528462 COL1A1P02452 1464 aaPredicted RBP26.79■■□□□ 1.88
PACSIN3-205ENST00000528462 COL4A5P29400 1685 aa26.79■■□□□ 1.88
PACSIN3-205ENST00000528462 NIM1KQ8IY84 436 aa26.79■■□□□ 1.88
PACSIN3-205ENST00000528462 ZNRF3Q9ULT6 936 aa26.79■■□□□ 1.88
PACSIN3-205ENST00000528462 GSPT1P15170 499 aaKnown RBP26.78■■□□□ 1.88
PACSIN3-205ENST00000528462 PI16Q6UXB8 463 aa26.78■■□□□ 1.88
PACSIN3-205ENST00000528462 SALL1Q9NSC2 1324 aa26.77■■□□□ 1.88
PACSIN3-205ENST00000528462 ZAP70P43403 619 aa26.77■■□□□ 1.88
PACSIN3-205ENST00000528462 WDR66Q8TBY9 1149 aa26.77■■□□□ 1.88
PACSIN3-205ENST00000528462 CHD4Q14839 1912 aa26.77■■□□□ 1.88
PACSIN3-205ENST00000528462 YDJCA8MPS7 323 aa26.76■■□□□ 1.87
PACSIN3-205ENST00000528462 STRIP1Q5VSL9 837 aa26.76■■□□□ 1.87
PACSIN3-205ENST00000528462 SNRKQ9NRH2 765 aa26.76■■□□□ 1.87
PACSIN3-205ENST00000528462 PAG1Q9NWQ8 432 aa26.76■■□□□ 1.87
PACSIN3-205ENST00000528462 IGSF3O75054 1194 aa26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 CYP2E1P05181 493 aaPredicted RBP26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 TTF1Q15361 905 aaPredicted RBP26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 TICAM2Q86XR7 235 aa26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 TBC1D22AQ8WUA7 517 aa26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 DNAJC2Q99543 621 aaKnown RBP26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 SBF1O95248 1867 aa26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 EVI5LQ96CN4 794 aa26.75■■□□□ 1.87
PACSIN3-205ENST00000528462 MYH13Q9UKX3 1938 aa26.74■■□□□ 1.87
PACSIN3-205ENST00000528462 FZD9O00144 591 aa26.74■■□□□ 1.87
PACSIN3-205ENST00000528462 FKBP1AP62942 108 aaKnown RBP26.74■■□□□ 1.87
PACSIN3-205ENST00000528462 TTLL5Q6EMB2 1281 aa26.74■■□□□ 1.87
PACSIN3-205ENST00000528462 ZGPATQ8N5A5 531 aaKnown RBP26.74■■□□□ 1.87
PACSIN3-205ENST00000528462 SCN9AQ15858 1988 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 USP17L3A6NCW0 530 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 USP17L4A6NCW7 530 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 GOLIM4O00461 696 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 GTF2IP78347 998 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 USP17L1Q7RTZ2 530 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 CNTROBQ8N137 903 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 NDUFB9Q9Y6M9 179 aa26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 DICER1Q9UPY3 1922 aaKnown RBP26.73■■□□□ 1.87
PACSIN3-205ENST00000528462 SDSP20132 328 aa26.72■■□□□ 1.87
PACSIN3-205ENST00000528462 KBTBD3Q8NAB2 608 aa26.72■■□□□ 1.87
PACSIN3-205ENST00000528462 KCNQ5Q9NR82 932 aa26.72■■□□□ 1.87
PACSIN3-205ENST00000528462 CHAF1AQ13111 956 aaPredicted RBP26.71■■□□□ 1.87
PACSIN3-205ENST00000528462 EDC3Q96F86 508 aaKnown RBP26.71■■□□□ 1.87
PACSIN3-205ENST00000528462 ANTXR1Q9H6X2 564 aa26.71■■□□□ 1.87
PACSIN3-205ENST00000528462 SUGT1Q9Y2Z0 365 aa26.71■■□□□ 1.87
PACSIN3-205ENST00000528462 CCDC88AQ3V6T2 1871 aa26.71■■□□□ 1.87
PACSIN3-205ENST00000528462 DACT2Q5SW24 774 aa26.71■■□□□ 1.87
PACSIN3-205ENST00000528462 PSME4Q14997 1843 aa26.7■■□□□ 1.86
PACSIN3-205ENST00000528462 TRIM6-TRIM34B2RNG4 842 aa26.7■■□□□ 1.86
PACSIN3-205ENST00000528462 VIL1P09327 827 aaKnown RBP26.7■■□□□ 1.86
PACSIN3-205ENST00000528462 MFSD14BQ5SR56 506 aa26.7■■□□□ 1.86
PACSIN3-205ENST00000528462 TMED8Q6PL24 325 aaPredicted RBP26.7■■□□□ 1.86
PACSIN3-205ENST00000528462 DCAF8L1A6NGE4 600 aa26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 MAP4K4O95819 1239 aaPredicted RBP26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 CXCL9Q07325 125 aa26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 SPTY2D1Q68D10 685 aaPredicted RBP26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 PIH1D3Q9NQM4 214 aaKnown RBP26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 RNF181Q9P0P0 153 aa26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 ZC3H4Q9UPT8 1303 aaKnown RBP26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 RFX7Q2KHR2 1363 aa26.69■■□□□ 1.86
PACSIN3-205ENST00000528462 C9orf131Q5VYM1 1079 aa26.68■■□□□ 1.86
PACSIN3-205ENST00000528462 TBC1D9Q6ZT07 1266 aa26.68■■□□□ 1.86
PACSIN3-205ENST00000528462 TNIP1Q15025 636 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 RILPL2Q969X0 211 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 ABCF2Q9UG63 623 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 JAG2Q9Y219 1238 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 MYO3BQ8WXR4 1341 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 ZNF646O15015 1829 aaPredicted RBP26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 RAD17O75943 681 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 EIF6P56537 245 aaKnown RBP26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 LRRFIP1Q32MZ4 808 aaKnown RBP26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 CIAPIN1Q6FI81 312 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 CERS5Q8N5B7 392 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 LRP2BPQ9P2M1 347 aa26.67■■□□□ 1.86
PACSIN3-205ENST00000528462 PSMD14O00487 310 aa26.66■■□□□ 1.86
PACSIN3-205ENST00000528462 MAP3K12Q12852 859 aa26.66■■□□□ 1.86
PACSIN3-205ENST00000528462 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.66■■□□□ 1.86
PACSIN3-205ENST00000528462 LDHBP07195 334 aaKnown RBP26.65■■□□□ 1.86
PACSIN3-205ENST00000528462 PRDX5P30044 214 aa26.65■■□□□ 1.86
PACSIN3-205ENST00000528462 RSBN1LQ6PCB5 846 aaPredicted RBP26.65■■□□□ 1.86
PACSIN3-205ENST00000528462 ERICH6Q7L0X2 663 aa26.65■■□□□ 1.86
PACSIN3-205ENST00000528462 FSD1Q9BTV5 496 aa26.65■■□□□ 1.86
PACSIN3-205ENST00000528462 DOCK2Q92608 1830 aa26.65■■□□□ 1.86
PACSIN3-205ENST00000528462 IDH1O75874 414 aaKnown RBP26.64■■□□□ 1.86
PACSIN3-205ENST00000528462 ZFYP08048 801 aaPredicted RBP26.64■■□□□ 1.86
PACSIN3-205ENST00000528462 GMLQ99445 158 aa26.64■■□□□ 1.86
PACSIN3-205ENST00000528462 ZSCAN25Q6NSZ9 544 aa26.63■■□□□ 1.85
PACSIN3-205ENST00000528462 AGBL3Q8NEM8 1001 aa26.63■■□□□ 1.85
PACSIN3-205ENST00000528462 FBXW7Q969H0 707 aa26.63■■□□□ 1.85
PACSIN3-205ENST00000528462 HIP1O00291 1037 aa26.62■■□□□ 1.85
PACSIN3-205ENST00000528462 RPS12P25398 132 aaKnown RBP26.62■■□□□ 1.85
PACSIN3-205ENST00000528462 MMP14P50281 582 aa26.62■■□□□ 1.85
PACSIN3-205ENST00000528462 GRIK5Q16478 980 aa26.62■■□□□ 1.85
PACSIN3-205ENST00000528462 NSUN4Q96CB9 384 aaKnown RBP26.62■■□□□ 1.85
PACSIN3-205ENST00000528462 MRIQ9BWK5 157 aa26.62■■□□□ 1.85
PACSIN3-205ENST00000528462 ZNF541Q9H0D2 1346 aa26.61■■□□□ 1.85
PACSIN3-205ENST00000528462 ADD2P35612 726 aa26.61■■□□□ 1.85
PACSIN3-205ENST00000528462 UBE3CQ15386 1083 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms