RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 FAM177A1Q8N128 213 aaPredicted RBP16.96■□□□□ 0.3
CAPN1-214ENST00000528165 CCDC34Q96HJ3 373 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 MPHOSPH8Q99549 860 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 AGXT2Q9BYV1 514 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 ARFGAP3Q9NP61 516 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 FPGT-TNNI3KV9GXZ4 949 aa16.96■□□□□ 0.3
CAPN1-214ENST00000528165 POLR3DP05423 398 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-214ENST00000528165 DDX46Q7L014 1031 aaKnown RBP16.95■□□□□ 0.3
CAPN1-214ENST00000528165 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
CAPN1-214ENST00000528165 ZNF274Q96GC6 653 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-214ENST00000528165 EPC1Q9H2F5 836 aa16.95■□□□□ 0.3
CAPN1-214ENST00000528165 POLR3EQ9NVU0 708 aa16.95■□□□□ 0.3
CAPN1-214ENST00000528165 ISM2Q6H9L7 571 aa16.95■□□□□ 0.3
CAPN1-214ENST00000528165 SLC26A8Q96RN1 970 aa16.95■□□□□ 0.3
CAPN1-214ENST00000528165 TMX1Q9H3N1 280 aa16.95■□□□□ 0.3
CAPN1-214ENST00000528165 MRC1P22897 1456 aa16.95■□□□□ 0.3
CAPN1-214ENST00000528165 TOP1P11387 765 aaKnown RBP16.94■□□□□ 0.3
CAPN1-214ENST00000528165 CASQ1P31415 396 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 ZSCAN26Q16670 478 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 AK7Q96M32 723 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 TFCP2Q12800 502 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 RIC3Q7Z5B4 369 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 C14orf37Q86TY3 774 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 HAUS7Q99871 368 aa16.94■□□□□ 0.3
CAPN1-214ENST00000528165 CWC15Q9P013 229 aaKnown RBP16.94■□□□□ 0.3
CAPN1-214ENST00000528165 PRAMEF22A3QJZ6 481 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 OTUD7BQ6GQQ9 843 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 SYNE3Q6ZMZ3 975 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 TNRQ92752 1358 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 VWA3AA6NCI4 1184 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 ARHGAP6O43182 974 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 IGKV5-2P06315 115 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 FDPSP14324 419 aaKnown RBP16.93■□□□□ 0.3
CAPN1-214ENST00000528165 GNG11P61952 73 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 PPP2R3AQ06190 1150 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 CCDC191Q8NCU4 936 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 DPF2Q92785 391 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 C8orf76Q96K31 380 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 PPP2R2CQ9Y2T4 447 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 SH3TC1Q8TE82 1336 aa16.93■□□□□ 0.3
CAPN1-214ENST00000528165 E7EWF7 191 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 PFKFB1P16118 471 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 TNNT3P45378 269 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-214ENST00000528165 MYL5Q02045 173 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 CHST3Q7LGC8 479 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 PLCD3Q8N3E9 789 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 HSD3B7Q9H2F3 369 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 RASSF4Q9H2L5 321 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 COPRSQ9NQ92 184 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 GOLGA6L9A6NEM1 432 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 MAP3K9P80192 1104 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 PLEKHO1Q53GL0 409 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-214ENST00000528165 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 VSTM4Q8IW00 320 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 DBNDD2Q9BQY9 259 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 DSCC1Q9BVC3 393 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 PLEKHG1Q9ULL1 1385 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 CMA1P23946 247 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 GOLGA8FQ08AF8 430 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 GOLGA8DPQ0D2H9 430 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 MYSM1Q5VVJ2 828 aa16.92■□□□□ 0.3
CAPN1-214ENST00000528165 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
CAPN1-214ENST00000528165 ANKARQ7Z5J8 1434 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 RNMTO43148 476 aaKnown RBP16.91■□□□□ 0.3
CAPN1-214ENST00000528165 C1orf141Q5JVX7 400 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 BRAPQ7Z569 592 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 PARD6BQ9BYG5 372 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 RGPD8O14715 1765 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-214ENST00000528165 LTKP29376 864 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 RABGGTAQ92696 567 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 MRFAP1Q9Y605 127 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 DIP2AQ14689 1571 aa16.91■□□□□ 0.3
CAPN1-214ENST00000528165 LAMA4Q16363 1823 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 NEURL1BA8MQ27 555 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 IP6K1Q92551 441 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 EXOC4Q96A65 974 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 WDR24Q96S15 920 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 FUT8Q9BYC5 575 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 HELLSQ9NRZ9 838 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 GCKRQ14397 625 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 RSRC2Q7L4I2 434 aaKnown RBP16.9■□□□□ 0.3
CAPN1-214ENST00000528165 NFATC2IPQ8NCF5 419 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 GOLGA5Q8TBA6 731 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 GOLGA1Q92805 767 aa16.9■□□□□ 0.3
CAPN1-214ENST00000528165 CCDC9Q9Y3X0 531 aaKnown RBP16.9■□□□□ 0.3
CAPN1-214ENST00000528165 SYKP43405 635 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 LMAN1P49257 510 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 AXDND1Q5T1B0 1012 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-214ENST00000528165 JAKMIP3Q5VZ66 844 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 FBXO18Q8NFZ0 1043 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 TMEM232C9JQI7 657 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 OLFM4Q6UX06 510 aa16.89■□□□□ 0.29
CAPN1-214ENST00000528165 BAG1Q99933 345 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-214ENST00000528165 TUBE1Q9UJT0 475 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms