RNA–Protein interactions for RNA: ENST00000527840.1

SOX6-209, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-209ENST00000527840 SMG8Q8ND04 991 aaKnown RBP6.92□□□□□ -1.3
SOX6-209ENST00000527840 STK32AQ8WU08 396 aa6.92□□□□□ -1.3
SOX6-209ENST00000527840 SLC7A3Q8WY07 619 aa6.92□□□□□ -1.3
SOX6-209ENST00000527840 NUDT16Q96DE0 195 aaKnown RBP6.92□□□□□ -1.3
SOX6-209ENST00000527840 OSBPL1AQ9BXW6 950 aa6.92□□□□□ -1.3
SOX6-209ENST00000527840 CYP4F12Q9HCS2 524 aa6.92□□□□□ -1.3
SOX6-209ENST00000527840 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
SOX6-209ENST00000527840 ZBTB39O15060 712 aa6.91□□□□□ -1.3
SOX6-209ENST00000527840 TIAF1O95411 115 aa6.91□□□□□ -1.3
SOX6-209ENST00000527840 JAG1P78504 1218 aa6.91□□□□□ -1.3
SOX6-209ENST00000527840 NUTM2GQ5VZR2 741 aa6.91□□□□□ -1.3
SOX6-209ENST00000527840 CAPN12Q6ZSI9 719 aa6.91□□□□□ -1.3
SOX6-209ENST00000527840 TMEM102Q8N9M5 508 aaPredicted RBP6.91□□□□□ -1.3
SOX6-209ENST00000527840 ASIC4Q96FT7 647 aa6.91□□□□□ -1.3
SOX6-209ENST00000527840 TMPRSS13Q9BYE2 586 aa6.91□□□□□ -1.3
SOX6-209ENST00000527840 CES1P23141 567 aa6.9□□□□□ -1.3
SOX6-209ENST00000527840 RXRBP28702 533 aa6.9□□□□□ -1.3
SOX6-209ENST00000527840 OGFOD2Q6N063 350 aa6.9□□□□□ -1.3
SOX6-209ENST00000527840 CLP1Q92989 425 aaKnown RBP6.9□□□□□ -1.3
SOX6-209ENST00000527840 PMEPA1Q969W9 287 aa6.9□□□□□ -1.3
SOX6-209ENST00000527840 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.3
SOX6-209ENST00000527840 CNTN3Q9P232 1028 aa6.9□□□□□ -1.3
SOX6-209ENST00000527840 EIF4EBP3O60516 100 aaPredicted RBP6.89□□□□□ -1.31
SOX6-209ENST00000527840 ACPPP15309 386 aa6.89□□□□□ -1.31
SOX6-209ENST00000527840 PAOXQ6QHF9 649 aa6.89□□□□□ -1.31
SOX6-209ENST00000527840 FBXL6Q8N531 539 aa6.89□□□□□ -1.31
SOX6-209ENST00000527840 POU5F2Q8N7G0 328 aa6.89□□□□□ -1.31
SOX6-209ENST00000527840 FAM95CA0A1B0GW59 222 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 ATG7O95352 703 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 PCSK2P16519 638 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 JUNBP17275 347 aaPredicted RBP6.88□□□□□ -1.31
SOX6-209ENST00000527840 ITGB5P18084 799 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 IKBKEQ14164 716 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 NFXL1Q6ZNB6 911 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 C1orf127Q8N9H9 656 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 C12orf50Q8NA57 414 aaPredicted RBP6.88□□□□□ -1.31
SOX6-209ENST00000527840 BSNDQ8WZ55 320 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 YIPF2Q9BWQ6 316 aa6.88□□□□□ -1.31
SOX6-209ENST00000527840 BSDC1Q9NW68 430 aaPredicted RBP6.88□□□□□ -1.31
SOX6-209ENST00000527840 LOC100289279A0A1B0GTE1 492 aa6.87□□□□□ -1.31
SOX6-209ENST00000527840 AGBL5Q8NDL9 886 aa6.87□□□□□ -1.31
SOX6-209ENST00000527840 SOX1O00570 391 aaPredicted RBP6.86□□□□□ -1.31
SOX6-209ENST00000527840 PRKCSHP14314 528 aaPredicted RBP6.86□□□□□ -1.31
SOX6-209ENST00000527840 TMEM164Q5U3C3 297 aa6.86□□□□□ -1.31
SOX6-209ENST00000527840 TP53INP2Q8IXH6 220 aa6.86□□□□□ -1.31
SOX6-209ENST00000527840 EZH1Q92800 747 aaPredicted RBP6.86□□□□□ -1.31
SOX6-209ENST00000527840 HHIPQ96QV1 700 aa6.86□□□□□ -1.31
SOX6-209ENST00000527840 USP26Q9BXU7 913 aa6.86□□□□□ -1.31
SOX6-209ENST00000527840 CYP26A1O43174 497 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 C8AP07357 584 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 NFKBIBQ15653 356 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 TMEM132AQ24JP5 1023 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 EXOSC6Q5RKV6 272 aaKnown RBP6.85□□□□□ -1.31
SOX6-209ENST00000527840 HGSNATQ68CP4 663 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 VN1R5Q7Z5H4 357 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 ZAR1Q86SH2 424 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 EDEM1Q92611 657 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 NXPE3Q969Y0 559 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 CHRDQ9H2X0 955 aa6.85□□□□□ -1.31
SOX6-209ENST00000527840 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.85□□□□□ -1.31
SOX6-209ENST00000527840 USP11P51784 963 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 SRPK2P78362 688 aaKnown RBP6.84□□□□□ -1.31
SOX6-209ENST00000527840 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 TTC16Q8NEE8 873 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 HELQQ8TDG4 1101 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 TBC1D32Q96NH3 1257 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 OSMRQ99650 979 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 ZKSCAN3Q9BRR0 538 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
SOX6-209ENST00000527840 PRKAG2Q9UGJ0 569 aa6.84□□□□□ -1.31
SOX6-209ENST00000527840 ZNF777Q9ULD5 760 aaPredicted RBP6.84□□□□□ -1.31
SOX6-209ENST00000527840 TRPA1O75762 1119 aa6.83□□□□□ -1.32
SOX6-209ENST00000527840 PDGFAP04085 211 aa6.83□□□□□ -1.32
SOX6-209ENST00000527840 EDN3P14138 238 aa6.83□□□□□ -1.32
SOX6-209ENST00000527840 MZF1P28698 734 aaPredicted RBP6.83□□□□□ -1.32
SOX6-209ENST00000527840 CDPF1Q6NVV7 123 aa6.83□□□□□ -1.32
SOX6-209ENST00000527840 C2CD4AQ8NCU7 369 aaPredicted RBP6.83□□□□□ -1.32
SOX6-209ENST00000527840 FLCNQ8NFG4 579 aa6.83□□□□□ -1.32
SOX6-209ENST00000527840 FBLIM1Q8WUP2 373 aa6.83□□□□□ -1.32
SOX6-209ENST00000527840 ESRRAP11474 423 aaPredicted RBP6.82□□□□□ -1.32
SOX6-209ENST00000527840 CYP27A1Q02318 531 aa6.82□□□□□ -1.32
SOX6-209ENST00000527840 SOX4Q06945 474 aaPredicted RBP6.82□□□□□ -1.32
SOX6-209ENST00000527840 GGNBP2Q9H3C7 697 aa6.82□□□□□ -1.32
SOX6-209ENST00000527840 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.81□□□□□ -1.32
SOX6-209ENST00000527840 DLGAP3O95886 979 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 ATP2B4P23634 1241 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 ADMP35318 185 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 DNM1Q05193 864 aaKnown RBP6.81□□□□□ -1.32
SOX6-209ENST00000527840 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 C8orf34Q49A92 452 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
SOX6-209ENST00000527840 HP1BP3Q5SSJ5 553 aaPredicted RBP6.81□□□□□ -1.32
SOX6-209ENST00000527840 SNX29Q8TEQ0 813 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 GATA6Q92908 595 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 PAK6Q9NQU5 681 aaPredicted RBP6.81□□□□□ -1.32
SOX6-209ENST00000527840 SEPT3Q9UH03 358 aa6.81□□□□□ -1.32
SOX6-209ENST00000527840 ADH5P11766 374 aa6.8□□□□□ -1.32
SOX6-209ENST00000527840 DRD2P14416 443 aa6.8□□□□□ -1.32
SOX6-209ENST00000527840 MAP7Q14244 749 aa6.8□□□□□ -1.32
SOX6-209ENST00000527840 SHISA5Q8N114 240 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms