RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 OSBPL3Q9H4L5 887 aa20.2■□□□□ 0.82
CAPN1-205ENST00000526954 DENND2AQ9ULE3 1009 aa20.2■□□□□ 0.82
CAPN1-205ENST00000526954 FAM205AQ6ZU69 1335 aa20.2■□□□□ 0.82
CAPN1-205ENST00000526954 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
CAPN1-205ENST00000526954 MCAMP43121 646 aa20.19■□□□□ 0.82
CAPN1-205ENST00000526954 RASGRF1Q13972 1273 aa20.19■□□□□ 0.82
CAPN1-205ENST00000526954 IQSEC3Q9UPP2 1182 aaPredicted RBP20.19■□□□□ 0.82
CAPN1-205ENST00000526954 AOX1Q06278 1338 aa20.19■□□□□ 0.82
CAPN1-205ENST00000526954 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-205ENST00000526954 SCARF1Q14162 830 aa20.18■□□□□ 0.82
CAPN1-205ENST00000526954 STRIP1Q5VSL9 837 aa20.18■□□□□ 0.82
CAPN1-205ENST00000526954 KCNQ5Q9NR82 932 aa20.18■□□□□ 0.82
CAPN1-205ENST00000526954 HMG20BQ9P0W2 317 aa20.18■□□□□ 0.82
CAPN1-205ENST00000526954 COL1A1P02452 1464 aaPredicted RBP20.18■□□□□ 0.82
CAPN1-205ENST00000526954 USP17L3A6NCW0 530 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 USP17L4A6NCW7 530 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 ERC2O15083 957 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 CXCL9Q07325 125 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 TTLL5Q6EMB2 1281 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 USP17L1Q7RTZ2 530 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 SPATA5Q8NB90 893 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 PI4K2BQ8TCG2 481 aa20.17■□□□□ 0.82
CAPN1-205ENST00000526954 GLRX3O76003 335 aaKnown RBP20.16■□□□□ 0.82
CAPN1-205ENST00000526954 EIF6P56537 245 aaKnown RBP20.16■□□□□ 0.82
CAPN1-205ENST00000526954 FKBP1AP62942 108 aaKnown RBP20.16■□□□□ 0.82
CAPN1-205ENST00000526954 GTF2IP78347 998 aa20.16■□□□□ 0.82
CAPN1-205ENST00000526954 WDR66Q8TBY9 1149 aa20.16■□□□□ 0.82
CAPN1-205ENST00000526954 HAUS7Q99871 368 aa20.16■□□□□ 0.82
CAPN1-205ENST00000526954 RAD17O75943 681 aa20.15■□□□□ 0.82
CAPN1-205ENST00000526954 VIL1P09327 827 aaKnown RBP20.15■□□□□ 0.82
CAPN1-205ENST00000526954 TNIP1Q15025 636 aa20.15■□□□□ 0.82
CAPN1-205ENST00000526954 DACT2Q5SW24 774 aa20.15■□□□□ 0.82
CAPN1-205ENST00000526954 TSHZ3Q63HK5 1081 aa20.15■□□□□ 0.82
CAPN1-205ENST00000526954 CIAPIN1Q6FI81 312 aa20.15■□□□□ 0.82
CAPN1-205ENST00000526954 TBC1D22AQ8WUA7 517 aa20.15■□□□□ 0.82
CAPN1-205ENST00000526954 SALL1Q9NSC2 1324 aa20.15■□□□□ 0.82
CAPN1-205ENST00000526954 PSMD14O00487 310 aa20.14■□□□□ 0.81
CAPN1-205ENST00000526954 PI16Q6UXB8 463 aa20.14■□□□□ 0.81
CAPN1-205ENST00000526954 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
CAPN1-205ENST00000526954 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
CAPN1-205ENST00000526954 ZAP70P43403 619 aa20.13■□□□□ 0.81
CAPN1-205ENST00000526954 CHAF1AQ13111 956 aaPredicted RBP20.13■□□□□ 0.81
CAPN1-205ENST00000526954 SNRKQ9NRH2 765 aa20.13■□□□□ 0.81
CAPN1-205ENST00000526954 MYO5AQ9Y4I1 1855 aaKnown RBP20.12■□□□□ 0.81
CAPN1-205ENST00000526954 MYO3BQ8WXR4 1341 aa20.12■□□□□ 0.81
CAPN1-205ENST00000526954 DOCK2Q92608 1830 aa20.12■□□□□ 0.81
CAPN1-205ENST00000526954 CYP2E1P05181 493 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-205ENST00000526954 RSBN1LQ6PCB5 846 aaPredicted RBP20.12■□□□□ 0.81
CAPN1-205ENST00000526954 GPC2Q8N158 579 aa20.12■□□□□ 0.81
CAPN1-205ENST00000526954 ZGPATQ8N5A5 531 aaKnown RBP20.12■□□□□ 0.81
CAPN1-205ENST00000526954 SUGT1Q9Y2Z0 365 aa20.12■□□□□ 0.81
CAPN1-205ENST00000526954 IGSF3O75054 1194 aa20.11■□□□□ 0.81
CAPN1-205ENST00000526954 MFSD14BQ5SR56 506 aa20.11■□□□□ 0.81
CAPN1-205ENST00000526954 CERS5Q8N5B7 392 aa20.11■□□□□ 0.81
CAPN1-205ENST00000526954 AGBL3Q8NEM8 1001 aa20.11■□□□□ 0.81
CAPN1-205ENST00000526954 FBXW7Q969H0 707 aa20.11■□□□□ 0.81
CAPN1-205ENST00000526954 GMLQ99445 158 aa20.11■□□□□ 0.81
CAPN1-205ENST00000526954 JAG2Q9Y219 1238 aa20.11■□□□□ 0.81
CAPN1-205ENST00000526954 RPS12P25398 132 aaKnown RBP20.1■□□□□ 0.81
CAPN1-205ENST00000526954 TTF1Q15361 905 aaPredicted RBP20.1■□□□□ 0.81
CAPN1-205ENST00000526954 DPY19L2Q6NUT2 758 aa20.1■□□□□ 0.81
CAPN1-205ENST00000526954 SKAP1Q86WV1 359 aa20.1■□□□□ 0.81
CAPN1-205ENST00000526954 DNAJC2Q99543 621 aaKnown RBP20.1■□□□□ 0.81
CAPN1-205ENST00000526954 PAG1Q9NWQ8 432 aa20.1■□□□□ 0.81
CAPN1-205ENST00000526954 NDUFB9Q9Y6M9 179 aa20.1■□□□□ 0.81
CAPN1-205ENST00000526954 GLTPD2A6NH11 291 aa20.09■□□□□ 0.81
CAPN1-205ENST00000526954 TTC22Q5TAA0 569 aa20.09■□□□□ 0.81
CAPN1-205ENST00000526954 SPTY2D1Q68D10 685 aaPredicted RBP20.09■□□□□ 0.81
CAPN1-205ENST00000526954 MXD3Q9BW11 206 aa20.09■□□□□ 0.81
CAPN1-205ENST00000526954 ANTXR1Q9H6X2 564 aa20.09■□□□□ 0.81
CAPN1-205ENST00000526954 GOLIM4O00461 696 aa20.08■□□□□ 0.81
CAPN1-205ENST00000526954 MMP14P50281 582 aa20.08■□□□□ 0.81
CAPN1-205ENST00000526954 TBC1D9Q6ZT07 1266 aa20.08■□□□□ 0.81
CAPN1-205ENST00000526954 DPF2Q92785 391 aa20.08■□□□□ 0.81
CAPN1-205ENST00000526954 PIH1D3Q9NQM4 214 aaKnown RBP20.08■□□□□ 0.81
CAPN1-205ENST00000526954 GJA3Q9Y6H8 435 aa20.08■□□□□ 0.81
CAPN1-205ENST00000526954 MYH7P12883 1935 aa20.08■□□□□ 0.8
CAPN1-205ENST00000526954 AK9Q5TCS8 1911 aa20.08■□□□□ 0.8
CAPN1-205ENST00000526954 RGS3P49796 1198 aa20.07■□□□□ 0.8
CAPN1-205ENST00000526954 ERICH6Q7L0X2 663 aa20.07■□□□□ 0.8
CAPN1-205ENST00000526954 EDC3Q96F86 508 aaKnown RBP20.07■□□□□ 0.8
CAPN1-205ENST00000526954 ABCF2Q9UG63 623 aa20.07■□□□□ 0.8
CAPN1-205ENST00000526954 ZBTB12Q9Y330 459 aaPredicted RBP20.07■□□□□ 0.8
CAPN1-205ENST00000526954 DDNO94850 711 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-205ENST00000526954 LDHBP07195 334 aaKnown RBP20.06■□□□□ 0.8
CAPN1-205ENST00000526954 PRDX5P30044 214 aa20.06■□□□□ 0.8
CAPN1-205ENST00000526954 GMPSP49915 693 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-205ENST00000526954 GRIK5Q16478 980 aa20.06■□□□□ 0.8
CAPN1-205ENST00000526954 EVI5LQ96CN4 794 aa20.06■□□□□ 0.8
CAPN1-205ENST00000526954 L3MBTL3Q96JM7 780 aaPredicted RBP20.06■□□□□ 0.8
CAPN1-205ENST00000526954 LRP2BPQ9P2M1 347 aa20.06■□□□□ 0.8
CAPN1-205ENST00000526954 MAST2Q6P0Q8 1798 aa20.06■□□□□ 0.8
CAPN1-205ENST00000526954 GSPT1P15170 499 aaKnown RBP20.05■□□□□ 0.8
CAPN1-205ENST00000526954 TMED8Q6PL24 325 aaPredicted RBP20.05■□□□□ 0.8
CAPN1-205ENST00000526954 TICAM2Q86XR7 235 aa20.05■□□□□ 0.8
CAPN1-205ENST00000526954 KBTBD3Q8NAB2 608 aa20.05■□□□□ 0.8
CAPN1-205ENST00000526954 MRIQ9BWK5 157 aa20.05■□□□□ 0.8
CAPN1-205ENST00000526954 WDR90Q96KV7 1748 aa20.05■□□□□ 0.8
CAPN1-205ENST00000526954 MAST3O60307 1309 aa20.04■□□□□ 0.8
CAPN1-205ENST00000526954 MAP4K4O95819 1239 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms