RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 CHGBP05060 677 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 PDE6AP16499 860 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 SLC9C2Q5TAH2 1124 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 TMED8Q6PL24 325 aaPredicted RBP24.59■■□□□ 1.53
SMCO4-203ENST00000526869 OSBP2Q969R2 916 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 GGA1Q9UJY5 639 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 C10orf71Q711Q0 1435 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 DUOX1Q9NRD9 1551 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 IDH1O75874 414 aaKnown RBP24.58■■□□□ 1.53
SMCO4-203ENST00000526869 ZKSCAN1P17029 563 aaPredicted RBP24.58■■□□□ 1.53
SMCO4-203ENST00000526869 KLRK1P26718 216 aa24.58■■□□□ 1.53
SMCO4-203ENST00000526869 WASHC4Q2M389 1173 aa24.58■■□□□ 1.53
SMCO4-203ENST00000526869 CREB3L3Q68CJ9 461 aa24.58■■□□□ 1.53
SMCO4-203ENST00000526869 CCDC129Q6ZRS4 1044 aa24.58■■□□□ 1.53
SMCO4-203ENST00000526869 TM6SF1Q9BZW5 370 aa24.58■■□□□ 1.53
SMCO4-203ENST00000526869 MYO5AQ9Y4I1 1855 aaKnown RBP24.58■■□□□ 1.52
SMCO4-203ENST00000526869 TCRBV5S4A2TA0A5A2 114 aa24.57■■□□□ 1.52
SMCO4-203ENST00000526869 H0YIN7 160 aa24.57■■□□□ 1.52
SMCO4-203ENST00000526869 M0R2C6 588 aa24.57■■□□□ 1.52
SMCO4-203ENST00000526869 TSGA10IPQ3SY00 556 aa24.57■■□□□ 1.52
SMCO4-203ENST00000526869 ZNF804AQ7Z570 1209 aa24.57■■□□□ 1.52
SMCO4-203ENST00000526869 C2CD5Q86YS7 1000 aa24.57■■□□□ 1.52
SMCO4-203ENST00000526869 SLC27A2O14975 620 aa24.56■■□□□ 1.52
SMCO4-203ENST00000526869 UFL1O94874 794 aa24.56■■□□□ 1.52
SMCO4-203ENST00000526869 SLC4A3P48751 1232 aa24.56■■□□□ 1.52
SMCO4-203ENST00000526869 MCM2P49736 904 aa24.56■■□□□ 1.52
SMCO4-203ENST00000526869 PRPF40BQ6NWY9 871 aaKnown RBP24.56■■□□□ 1.52
SMCO4-203ENST00000526869 RASEFQ8IZ41 740 aa24.56■■□□□ 1.52
SMCO4-203ENST00000526869 NSFL1CQ9UNZ2 370 aaKnown RBP24.56■■□□□ 1.52
SMCO4-203ENST00000526869 K7ELQ4 463 aaPredicted RBP24.55■■□□□ 1.52
SMCO4-203ENST00000526869 SLFNL1Q499Z3 407 aa24.55■■□□□ 1.52
SMCO4-203ENST00000526869 WWC3Q9ULE0 1092 aa24.55■■□□□ 1.52
SMCO4-203ENST00000526869 ZNF532Q9HCE3 1301 aa24.55■■□□□ 1.52
SMCO4-203ENST00000526869 MAST2Q6P0Q8 1798 aa24.54■■□□□ 1.52
SMCO4-203ENST00000526869 TDRD7Q8NHU6 1098 aaKnown RBP24.54■■□□□ 1.52
SMCO4-203ENST00000526869 TBC1D16Q8TBP0 767 aa24.54■■□□□ 1.52
SMCO4-203ENST00000526869 LRP2BPQ9P2M1 347 aa24.54■■□□□ 1.52
SMCO4-203ENST00000526869 SALL1Q9NSC2 1324 aa24.54■■□□□ 1.52
SMCO4-203ENST00000526869 DLEC1Q9Y238 1755 aa24.54■■□□□ 1.52
SMCO4-203ENST00000526869 CD2BP2O95400 341 aaKnown RBP24.53■■□□□ 1.52
SMCO4-203ENST00000526869 HSPD1P10809 573 aaKnown RBP24.53■■□□□ 1.52
SMCO4-203ENST00000526869 NEK4P51957 841 aa24.53■■□□□ 1.52
SMCO4-203ENST00000526869 KRT32Q14532 448 aa24.53■■□□□ 1.52
SMCO4-203ENST00000526869 TXNRD3Q86VQ6 643 aa24.53■■□□□ 1.52
SMCO4-203ENST00000526869 PUS7LQ9H0K6 701 aaKnown RBP24.53■■□□□ 1.52
SMCO4-203ENST00000526869 TMX4Q9H1E5 349 aaPredicted RBP24.53■■□□□ 1.52
SMCO4-203ENST00000526869 IQSEC3Q9UPP2 1182 aaPredicted RBP24.53■■□□□ 1.52
SMCO4-203ENST00000526869 RPAP1Q9BWH6 1393 aaPredicted RBP24.53■■□□□ 1.52
SMCO4-203ENST00000526869 GPAA1O43292 621 aa24.52■■□□□ 1.52
SMCO4-203ENST00000526869 FRAT2O75474 233 aaPredicted RBP24.52■■□□□ 1.52
SMCO4-203ENST00000526869 MAGEB6Q8N7X4 407 aa24.52■■□□□ 1.52
SMCO4-203ENST00000526869 CNKSR1Q969H4 720 aa24.52■■□□□ 1.52
SMCO4-203ENST00000526869 PDGFDQ9GZP0 370 aaPredicted RBP24.52■■□□□ 1.52
SMCO4-203ENST00000526869 PSMA5P28066 241 aa24.51■■□□□ 1.51
SMCO4-203ENST00000526869 ERICH6Q7L0X2 663 aa24.51■■□□□ 1.51
SMCO4-203ENST00000526869 SLC51AQ86UW1 340 aa24.51■■□□□ 1.51
SMCO4-203ENST00000526869 ZGPATQ8N5A5 531 aaKnown RBP24.51■■□□□ 1.51
SMCO4-203ENST00000526869 CTNNA3Q9UI47 895 aa24.51■■□□□ 1.51
SMCO4-203ENST00000526869 KIF13BQ9NQT8 1826 aa24.51■■□□□ 1.51
SMCO4-203ENST00000526869 CACNA1SQ13698 1873 aa24.5■■□□□ 1.51
SMCO4-203ENST00000526869 VPS53Q5VIR6 699 aa24.5■■□□□ 1.51
SMCO4-203ENST00000526869 SPTY2D1Q68D10 685 aaPredicted RBP24.5■■□□□ 1.51
SMCO4-203ENST00000526869 WDR66Q8TBY9 1149 aa24.5■■□□□ 1.51
SMCO4-203ENST00000526869 ZNF622Q969S3 477 aaKnown RBP eCLIP24.5■■□□□ 1.51
SMCO4-203ENST00000526869 ZSWIM6Q9HCJ5 1215 aa24.5■■□□□ 1.51
SMCO4-203ENST00000526869 POLLQ9UGP5 575 aa24.5■■□□□ 1.51
SMCO4-203ENST00000526869 KIAA1551Q9HCM1 1747 aa24.49■■□□□ 1.51
SMCO4-203ENST00000526869 IL1R1P14778 569 aa24.49■■□□□ 1.51
SMCO4-203ENST00000526869 MPNDQ8N594 471 aa24.49■■□□□ 1.51
SMCO4-203ENST00000526869 ZMYM6O95789 1325 aa24.48■■□□□ 1.51
SMCO4-203ENST00000526869 AIDAQ96BJ3 306 aa24.48■■□□□ 1.51
SMCO4-203ENST00000526869 JAKMIP1Q96N16 626 aaKnown RBP24.48■■□□□ 1.51
SMCO4-203ENST00000526869 RAI14Q9P0K7 980 aa24.48■■□□□ 1.51
SMCO4-203ENST00000526869 ABCF2Q9UG63 623 aa24.48■■□□□ 1.51
SMCO4-203ENST00000526869 C6orf229H3BNL8 230 aa24.47■■□□□ 1.51
SMCO4-203ENST00000526869 FOXP2O15409 715 aa24.47■■□□□ 1.51
SMCO4-203ENST00000526869 GNAT2P19087 354 aa24.47■■□□□ 1.51
SMCO4-203ENST00000526869 CC2D2BQ6DHV5 1058 aa24.47■■□□□ 1.51
SMCO4-203ENST00000526869 UPF1Q92900 1129 aaKnown RBP eCLIP24.47■■□□□ 1.51
SMCO4-203ENST00000526869 TTC14Q96N46 770 aa24.47■■□□□ 1.51
SMCO4-203ENST00000526869 STRBPQ96SI9 672 aaKnown RBP24.47■■□□□ 1.51
SMCO4-203ENST00000526869 UPF3BQ9BZI7 483 aaKnown RBP24.47■■□□□ 1.51
SMCO4-203ENST00000526869 CD209Q9NNX6 404 aa24.47■■□□□ 1.51
SMCO4-203ENST00000526869 CYP46A1Q9Y6A2 500 aa24.47■■□□□ 1.51
SMCO4-203ENST00000526869 CYP21A2P08686 494 aa24.46■■□□□ 1.51
SMCO4-203ENST00000526869 CASTP20810 708 aaKnown RBP24.46■■□□□ 1.51
SMCO4-203ENST00000526869 CYP7A1P22680 504 aa24.46■■□□□ 1.51
SMCO4-203ENST00000526869 ALX1Q15699 326 aa24.46■■□□□ 1.51
SMCO4-203ENST00000526869 DPP8Q6V1X1 898 aaPredicted RBP24.46■■□□□ 1.51
SMCO4-203ENST00000526869 SLX4Q8IY92 1834 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 CHRNA5P30532 468 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 CHAF1AQ13111 956 aaPredicted RBP24.45■■□□□ 1.5
SMCO4-203ENST00000526869 ADCK5Q3MIX3 580 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 RUFY3Q7L099 469 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 EYA3Q99504 573 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 COA1Q9GZY4 146 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 MTFR1LQ9H019 292 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 ALDH8A1Q9H2A2 487 aaPredicted RBP24.45■■□□□ 1.5
SMCO4-203ENST00000526869 CCDC88AQ3V6T2 1871 aa24.45■■□□□ 1.5
SMCO4-203ENST00000526869 MBD4O95243 580 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms