RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 USP17L8P0C7I0 530 aa21.28■■□□□ 1
PKP3-203ENST00000525642 ADORA1P30542 326 aa21.28■■□□□ 1
PKP3-203ENST00000525642 AAMPQ13685 434 aa21.28■■□□□ 1
PKP3-203ENST00000525642 HSP90AB4PQ58FF6 505 aa21.28■■□□□ 1
PKP3-203ENST00000525642 CHADLQ6NUI6 762 aa21.28■■□□□ 1
PKP3-203ENST00000525642 TRPM4Q8TD43 1214 aa21.28■■□□□ 1
PKP3-203ENST00000525642 XAGE2Q96GT9 111 aa21.28■■□□□ 1
PKP3-203ENST00000525642 EGFRP00533 1210 aa21.27■■□□□ 1
PKP3-203ENST00000525642 TNNI3KQ59H18 835 aa21.27■■□□□ 1
PKP3-203ENST00000525642 CCDC102BQ68D86 513 aa21.27■■□□□ 1
PKP3-203ENST00000525642 VPS37DQ86XT2 251 aa21.27■■□□□ 1
PKP3-203ENST00000525642 ERC1Q8IUD2 1116 aa21.27■■□□□ 1
PKP3-203ENST00000525642 ZC3H15Q8WU90 426 aaKnown RBP21.27■■□□□ 1
PKP3-203ENST00000525642 EXOC6BQ9Y2D4 811 aa21.27■■□□□ 1
PKP3-203ENST00000525642 PCDHB15Q9Y5E8 787 aa21.27■■□□□ 1
PKP3-203ENST00000525642 FPGT-TNNI3KV9GXZ4 949 aa21.27■■□□□ 1
PKP3-203ENST00000525642 MYH13Q9UKX3 1938 aa21.26■□□□□ 0.99
PKP3-203ENST00000525642 SEMA3EO15041 775 aa21.26■□□□□ 0.99
PKP3-203ENST00000525642 PHKA1P46020 1223 aa21.26■□□□□ 0.99
PKP3-203ENST00000525642 SAMD7Q7Z3H4 446 aa21.26■□□□□ 0.99
PKP3-203ENST00000525642 ZBED3Q96IU2 234 aaPredicted RBP21.26■□□□□ 0.99
PKP3-203ENST00000525642 PDS5AQ29RF7 1337 aaKnown RBP21.26■□□□□ 0.99
PKP3-203ENST00000525642 COL1A1P02452 1464 aaPredicted RBP21.26■□□□□ 0.99
PKP3-203ENST00000525642 EAPPQ56P03 285 aaPredicted RBP21.25■□□□□ 0.99
PKP3-203ENST00000525642 IQSEC3Q9UPP2 1182 aaPredicted RBP21.25■□□□□ 0.99
PKP3-203ENST00000525642 RAB11FIP3O75154 756 aa21.24■□□□□ 0.99
PKP3-203ENST00000525642 ITGBL1O95965 494 aaPredicted RBP21.24■□□□□ 0.99
PKP3-203ENST00000525642 OS9Q13438 667 aaPredicted RBP21.24■□□□□ 0.99
PKP3-203ENST00000525642 MTMR14Q8NCE2 650 aa21.24■□□□□ 0.99
PKP3-203ENST00000525642 RHPN1Q8TCX5 695 aa21.24■□□□□ 0.99
PKP3-203ENST00000525642 TBC1D22AQ8WUA7 517 aa21.24■□□□□ 0.99
PKP3-203ENST00000525642 FBXW7Q969H0 707 aa21.24■□□□□ 0.99
PKP3-203ENST00000525642 EAF2Q96CJ1 260 aaPredicted RBP21.24■□□□□ 0.99
PKP3-203ENST00000525642 DCTPP1Q9H773 170 aa21.24■□□□□ 0.99
PKP3-203ENST00000525642 MYOZ2Q9NPC6 264 aa21.24■□□□□ 0.99
PKP3-203ENST00000525642 GNL3LQ9NVN8 582 aaKnown RBP21.24■□□□□ 0.99
PKP3-203ENST00000525642 MFSD14BQ5SR56 506 aa21.23■□□□□ 0.99
PKP3-203ENST00000525642 SUGT1Q9Y2Z0 365 aa21.23■□□□□ 0.99
PKP3-203ENST00000525642 SALL1Q9NSC2 1324 aa21.23■□□□□ 0.99
PKP3-203ENST00000525642 ARID4AP29374 1257 aaPredicted RBP21.22■□□□□ 0.99
PKP3-203ENST00000525642 KIF4BQ2VIQ3 1234 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 TBC1D10BQ4KMP7 808 aaPredicted RBP21.22■□□□□ 0.99
PKP3-203ENST00000525642 KIAA0825Q8IV33 1275 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 WDR66Q8TBY9 1149 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 KIF1BPQ96EK5 621 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 ZNF512BQ96KM6 892 aaPredicted RBP21.22■□□□□ 0.99
PKP3-203ENST00000525642 NEUROD6Q96NK8 337 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 DENND2AQ9ULE3 1009 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 JAG2Q9Y219 1238 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 PASKQ96RG2 1323 aa21.22■□□□□ 0.99
PKP3-203ENST00000525642 GRIK5Q16478 980 aa21.21■□□□□ 0.99
PKP3-203ENST00000525642 OGFOD1Q8N543 542 aa21.21■□□□□ 0.99
PKP3-203ENST00000525642 DBNDD2Q9BQY9 259 aa21.21■□□□□ 0.99
PKP3-203ENST00000525642 MRIQ9BWK5 157 aa21.21■□□□□ 0.99
PKP3-203ENST00000525642 DBNLQ9UJU6 430 aaKnown RBP21.21■□□□□ 0.99
PKP3-203ENST00000525642 AKAP11Q9UKA4 1901 aa21.2■□□□□ 0.98
PKP3-203ENST00000525642 FRAT2O75474 233 aaPredicted RBP21.2■□□□□ 0.98
PKP3-203ENST00000525642 RASGRF1Q13972 1273 aa21.2■□□□□ 0.98
PKP3-203ENST00000525642 CNTROBQ8N137 903 aa21.2■□□□□ 0.98
PKP3-203ENST00000525642 HDAC9Q9UKV0 1011 aa21.2■□□□□ 0.98
PKP3-203ENST00000525642 CLEC11AQ9Y240 323 aa21.2■□□□□ 0.98
PKP3-203ENST00000525642 WNT10BO00744 389 aa21.19■□□□□ 0.98
PKP3-203ENST00000525642 HDLBPQ00341 1268 aaKnown RBP21.19■□□□□ 0.98
PKP3-203ENST00000525642 CHAF1AQ13111 956 aaPredicted RBP21.19■□□□□ 0.98
PKP3-203ENST00000525642 MAP1SQ66K74 1059 aaPredicted RBP21.19■□□□□ 0.98
PKP3-203ENST00000525642 EXOC6Q8TAG9 804 aa21.19■□□□□ 0.98
PKP3-203ENST00000525642 POLR2AP24928 1970 aaKnown RBP21.19■□□□□ 0.98
PKP3-203ENST00000525642 SCARF1Q14162 830 aa21.18■□□□□ 0.98
PKP3-203ENST00000525642 RBM26Q5T8P6 1007 aaKnown RBP21.18■□□□□ 0.98
PKP3-203ENST00000525642 TLR7Q9NYK1 1049 aaKnown RBP21.18■□□□□ 0.98
PKP3-203ENST00000525642 HMG20BQ9P0W2 317 aa21.18■□□□□ 0.98
PKP3-203ENST00000525642 SERPINA10Q9UK55 444 aa21.18■□□□□ 0.98
PKP3-203ENST00000525642 PITPNM2Q9BZ72 1349 aa21.18■□□□□ 0.98
PKP3-203ENST00000525642 UQCRFS1P1P0C7P4 283 aa21.17■□□□□ 0.98
PKP3-203ENST00000525642 HSPA6P17066 643 aa21.17■□□□□ 0.98
PKP3-203ENST00000525642 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
PKP3-203ENST00000525642 NBPF9Q3BBW0 867 aa21.17■□□□□ 0.98
PKP3-203ENST00000525642 CCDC8Q9H0W5 538 aaPredicted RBP21.17■□□□□ 0.98
PKP3-203ENST00000525642 IL1RAPL2Q9NP60 686 aa21.17■□□□□ 0.98
PKP3-203ENST00000525642 TTF2Q9UNY4 1162 aaKnown RBP21.17■□□□□ 0.98
PKP3-203ENST00000525642 ECM29Q5VYK3 1845 aa21.17■□□□□ 0.98
PKP3-203ENST00000525642 ASTN2O75129 1339 aaPredicted RBP21.16■□□□□ 0.98
PKP3-203ENST00000525642 MCAMP43121 646 aa21.16■□□□□ 0.98
PKP3-203ENST00000525642 CLASRPQ8N2M8 674 aaKnown RBP21.16■□□□□ 0.98
PKP3-203ENST00000525642 F8W031 263 aaPredicted RBP21.15■□□□□ 0.98
PKP3-203ENST00000525642 CFAP100Q494V2 611 aa21.15■□□□□ 0.98
PKP3-203ENST00000525642 CCDC158Q5M9N0 1113 aa21.15■□□□□ 0.98
PKP3-203ENST00000525642 GORABQ5T7V8 394 aa21.15■□□□□ 0.98
PKP3-203ENST00000525642 CDC37L1Q7L3B6 337 aa21.15■□□□□ 0.98
PKP3-203ENST00000525642 AACSQ86V21 672 aa21.15■□□□□ 0.98
PKP3-203ENST00000525642 LRRCC1Q9C099 1032 aa21.15■□□□□ 0.98
PKP3-203ENST00000525642 SPDYE2BA6NHP3 402 aa21.14■□□□□ 0.97
PKP3-203ENST00000525642 SPDYE6P0CI01 402 aa21.14■□□□□ 0.97
PKP3-203ENST00000525642 APLP1P51693 650 aa21.14■□□□□ 0.97
PKP3-203ENST00000525642 DLGAP5Q15398 846 aa21.14■□□□□ 0.97
PKP3-203ENST00000525642 ZGPATQ8N5A5 531 aaKnown RBP21.14■□□□□ 0.97
PKP3-203ENST00000525642 SPATA5Q8NB90 893 aa21.14■□□□□ 0.97
PKP3-203ENST00000525642 PRMT6Q96LA8 375 aaPredicted RBP21.14■□□□□ 0.97
PKP3-203ENST00000525642 PCDHAC2Q9Y5I4 1007 aa21.14■□□□□ 0.97
PKP3-203ENST00000525642 MAST3O60307 1309 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms