RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 NUDT8Q8WV74 236 aa7.42□□□□□ -1.22
USP47-206ENST00000525367 TINF2Q9BSI4 451 aa7.42□□□□□ -1.22
USP47-206ENST00000525367 TGIF2Q9GZN2 237 aa7.42□□□□□ -1.22
USP47-206ENST00000525367 LACRTQ9GZZ8 138 aa7.42□□□□□ -1.22
USP47-206ENST00000525367 ZNF576Q9H609 170 aa7.42□□□□□ -1.22
USP47-206ENST00000525367 SRA1Q9HD15 236 aaKnown RBP7.42□□□□□ -1.22
USP47-206ENST00000525367 KBTBD4Q9NVX7 518 aa7.42□□□□□ -1.22
USP47-206ENST00000525367 DDX41Q9UJV9 622 aaKnown RBP7.42□□□□□ -1.22
USP47-206ENST00000525367 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.42□□□□□ -1.22
USP47-206ENST00000525367 ADARB2-AS1A8MUL3 147 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 ITGB2P05107 769 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 PSAPL1Q6NUJ1 521 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 ELMSAN1Q6PJG2 1045 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 C8orf86Q6ZUL3 223 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 C8orf37Q96NL8 207 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 CCSER2Q9H7U1 834 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 AVENQ9NQS1 362 aaPredicted RBP7.41□□□□□ -1.22
USP47-206ENST00000525367 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
USP47-206ENST00000525367 PPP4R2Q9NY27 417 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 STARD13Q9Y3M8 1113 aa7.41□□□□□ -1.22
USP47-206ENST00000525367 PAGE1O75459 146 aa7.4□□□□□ -1.22
USP47-206ENST00000525367 MAP2K3P46734 347 aa7.4□□□□□ -1.22
USP47-206ENST00000525367 GDF6Q6KF10 455 aaPredicted RBP7.4□□□□□ -1.22
USP47-206ENST00000525367 ACDQ96AP0 544 aa7.4□□□□□ -1.22
USP47-206ENST00000525367 CAPN10Q9HC96 672 aa7.4□□□□□ -1.22
USP47-206ENST00000525367 SEC31BQ9NQW1 1179 aa7.4□□□□□ -1.22
USP47-206ENST00000525367 ELOA3CA0A087WX78 387 aaPredicted RBP7.39□□□□□ -1.23
USP47-206ENST00000525367 ELOA3DA6NLF2 546 aaPredicted RBP7.39□□□□□ -1.23
USP47-206ENST00000525367 ENC1O14682 589 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 MSTNO14793 375 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 SMNDC1O75940 238 aaKnown RBP eCLIP7.39□□□□□ -1.23
USP47-206ENST00000525367 PLA2G4EQ3MJ16 856 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 ELOA3BQ3SY89 546 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 RASIP1Q5U651 963 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 LYPD4Q6UWN0 246 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 VN1R5Q7Z5H4 357 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 MICALL1Q8N3F8 863 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 ELOA3Q8NG57 546 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 SPOCK3Q9BQ16 436 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 RBSNQ9H1K0 784 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 PPM1HQ9ULR3 514 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 SOX13Q9UN79 622 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 TLR6Q9Y2C9 796 aa7.39□□□□□ -1.23
USP47-206ENST00000525367 ADAMTS2O95450 1211 aa7.38□□□□□ -1.23
USP47-206ENST00000525367 ALBP02768 609 aa7.38□□□□□ -1.23
USP47-206ENST00000525367 XRCC5P13010 732 aaKnown RBP7.38□□□□□ -1.23
USP47-206ENST00000525367 EPHA1P21709 976 aa7.38□□□□□ -1.23
USP47-206ENST00000525367 CDC25BP30305 580 aa7.38□□□□□ -1.23
USP47-206ENST00000525367 GRIK5Q16478 980 aa7.38□□□□□ -1.23
USP47-206ENST00000525367 PCSK7Q16549 785 aa7.38□□□□□ -1.23
USP47-206ENST00000525367 SLCO4C1Q6ZQN7 724 aa7.38□□□□□ -1.23
USP47-206ENST00000525367 GPN3Q9UHW5 284 aaPredicted RBP7.38□□□□□ -1.23
USP47-206ENST00000525367 NSFL1CQ9UNZ2 370 aaKnown RBP7.38□□□□□ -1.23
USP47-206ENST00000525367 MINDY4BA8MYZ0 360 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 EPXP11678 715 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 ZNF423Q2M1K9 1284 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 TXNDC11Q6PKC3 985 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 STK35Q8TDR2 534 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 BSNDQ8WZ55 320 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 DCAF5Q96JK2 942 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 NECAB3Q96P71 396 aaPredicted RBP7.37□□□□□ -1.23
USP47-206ENST00000525367 NOC4LQ9BVI4 516 aaKnown RBP7.37□□□□□ -1.23
USP47-206ENST00000525367 ADAMTS1Q9UHI8 967 aa7.37□□□□□ -1.23
USP47-206ENST00000525367 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.36□□□□□ -1.23
USP47-206ENST00000525367 SHISA8B8ZZ34 492 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 PROCP04070 461 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 LIG3P49916 1009 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 SRSF11Q05519 484 aaKnown RBP7.36□□□□□ -1.23
USP47-206ENST00000525367 FAM160A1Q05DH4 1040 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 PCDH1Q08174 1060 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 ZNF654Q8IZM8 581 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 GOLGA6L1Q8N7Z2 621 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
USP47-206ENST00000525367 JPH1Q9HDC5 661 aaPredicted RBP7.36□□□□□ -1.23
USP47-206ENST00000525367 CELA2BP08218 269 aaPredicted RBP7.35□□□□□ -1.23
USP47-206ENST00000525367 PTPRAP18433 802 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 GBP2P32456 591 aaPredicted RBP7.35□□□□□ -1.23
USP47-206ENST00000525367 PAK2Q13177 524 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 C20orf204Q6ZNR8 217 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 SV2BQ7L1I2 683 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 PHC3Q8NDX5 983 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 ANKRD24Q8TF21 1146 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 RSRP1Q9BUV0 290 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 ADAM19Q9H013 955 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 CLEC4MQ9H2X3 399 aaPredicted RBP7.35□□□□□ -1.23
USP47-206ENST00000525367 FRRS1LQ9P0K9 344 aa7.35□□□□□ -1.23
USP47-206ENST00000525367 RGS9O75916 674 aaPredicted RBP7.34□□□□□ -1.23
USP47-206ENST00000525367 BAG6P46379 1132 aa7.34□□□□□ -1.23
USP47-206ENST00000525367 PCNX4Q63HM2 1172 aa7.34□□□□□ -1.23
USP47-206ENST00000525367 FAM177A1Q8N128 213 aaPredicted RBP7.34□□□□□ -1.23
USP47-206ENST00000525367 SREK1Q8WXA9 508 aaKnown RBP7.34□□□□□ -1.23
USP47-206ENST00000525367 RHOVQ96L33 236 aa7.34□□□□□ -1.23
USP47-206ENST00000525367 TMEM74Q96NL1 305 aa7.34□□□□□ -1.23
USP47-206ENST00000525367 GDF2Q9UK05 429 aaPredicted RBP7.34□□□□□ -1.23
USP47-206ENST00000525367 INPP5FQ9Y2H2 1132 aa7.34□□□□□ -1.23
USP47-206ENST00000525367 M0R082 166 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 B3GALT4O96024 378 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 PF4P02776 101 aa7.33□□□□□ -1.24
USP47-206ENST00000525367 ESRRAP11474 423 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms