RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 SBF1O95248 1867 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L10C9JJH3 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L12C9JPN9 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L21D6R901 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 SERPINB2P05120 415 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 VEGFAP15692 232 aaPredicted RBP9.37□□□□□ -0.91
CASP4-205ENST00000525116 LMNB1P20700 586 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 VARSP26640 1264 aaKnown RBP9.37□□□□□ -0.91
CASP4-205ENST00000525116 CANXP27824 592 aaKnown RBP9.37□□□□□ -0.91
CASP4-205ENST00000525116 IL13P35225 146 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 RPIAP49247 311 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 KCNA1Q09470 495 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 OXLD1Q5BKU9 147 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 AKAP4Q5JQC9 854 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 BICDL1Q6ZP65 573 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 TTLL6Q8N841 843 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 SLC52A2Q9HAB3 445 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.37□□□□□ -0.91
CASP4-205ENST00000525116 NARFQ9UHQ1 456 aa9.37□□□□□ -0.91
CASP4-205ENST00000525116 TNRC6CQ9HCJ0 1690 aaKnown RBP9.36□□□□□ -0.91
CASP4-205ENST00000525116 GLTPD2A6NH11 291 aa9.36□□□□□ -0.91
CASP4-205ENST00000525116 H0YIN7 160 aa9.36□□□□□ -0.91
CASP4-205ENST00000525116 HMOX1P09601 288 aa9.36□□□□□ -0.91
CASP4-205ENST00000525116 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
CASP4-205ENST00000525116 PPP1R18Q6NYC8 613 aa9.36□□□□□ -0.91
CASP4-205ENST00000525116 PCGF6Q9BYE7 350 aa9.36□□□□□ -0.91
CASP4-205ENST00000525116 ZBTB1Q9Y2K1 713 aa9.36□□□□□ -0.91
CASP4-205ENST00000525116 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
CASP4-205ENST00000525116 RNMTO43148 476 aaKnown RBP9.35□□□□□ -0.91
CASP4-205ENST00000525116 CD2BP2O95400 341 aaKnown RBP9.35□□□□□ -0.91
CASP4-205ENST00000525116 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
CASP4-205ENST00000525116 ZNF622Q969S3 477 aaKnown RBP eCLIP9.35□□□□□ -0.91
CASP4-205ENST00000525116 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
CASP4-205ENST00000525116 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
CASP4-205ENST00000525116 RBM19Q9Y4C8 960 aaKnown RBP9.35□□□□□ -0.91
CASP4-205ENST00000525116 ADAMTS7Q9UKP4 1686 aa9.35□□□□□ -0.91
CASP4-205ENST00000525116 COL15A1P39059 1388 aa9.35□□□□□ -0.91
CASP4-205ENST00000525116 SCN11AQ9UI33 1791 aa9.35□□□□□ -0.91
CASP4-205ENST00000525116 AFDNP55196 1824 aaKnown RBP9.34□□□□□ -0.91
CASP4-205ENST00000525116 NFKBIEO00221 500 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 HSPA1AP0DMV8 641 aaKnown RBP9.34□□□□□ -0.91
CASP4-205ENST00000525116 HSPA1BP0DMV9 641 aaKnown RBP9.34□□□□□ -0.91
CASP4-205ENST00000525116 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
CASP4-205ENST00000525116 CRTC2Q53ET0 693 aaPredicted RBP9.34□□□□□ -0.91
CASP4-205ENST00000525116 TMEM164Q5U3C3 297 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 OGFOD1Q8N543 542 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 EHBP1Q8NDI1 1231 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 FAM200AQ8TCP9 573 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 DNAAF2Q9NVR5 837 aaKnown RBP9.34□□□□□ -0.91
CASP4-205ENST00000525116 ZMIZ1Q9ULJ6 1067 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 PCDHB11Q9Y5F2 797 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 CARMIL3Q8ND23 1372 aa9.34□□□□□ -0.91
CASP4-205ENST00000525116 ESPNB1AK53 854 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 POTECB2RU33 542 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 C21orf2O43822 256 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 USP4Q13107 963 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 PTK7Q13308 1070 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 PLA2G2CQ5R387 149 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 VASH1Q7L8A9 365 aaPredicted RBP9.33□□□□□ -0.92
CASP4-205ENST00000525116 STK32AQ8WU08 396 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 KCTD15Q96SI1 283 aaPredicted RBP9.33□□□□□ -0.92
CASP4-205ENST00000525116 MAP4K5Q9Y4K4 846 aa9.33□□□□□ -0.92
CASP4-205ENST00000525116 STARD3NLO95772 234 aa9.32□□□□□ -0.92
CASP4-205ENST00000525116 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
CASP4-205ENST00000525116 TBC1D9BQ66K14 1250 aa9.32□□□□□ -0.92
CASP4-205ENST00000525116 ANKMY2Q8IV38 441 aa9.32□□□□□ -0.92
CASP4-205ENST00000525116 TTC5Q8N0Z6 440 aa9.32□□□□□ -0.92
CASP4-205ENST00000525116 LARGE2Q8N3Y3 721 aa9.32□□□□□ -0.92
CASP4-205ENST00000525116 CCDC88AQ3V6T2 1871 aa9.32□□□□□ -0.92
CASP4-205ENST00000525116 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 A0A087WZG4 1122 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 NPHP1O15259 732 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 MYCP01106 439 aaPredicted RBP9.31□□□□□ -0.92
CASP4-205ENST00000525116 PDE6BP35913 854 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 EIF5P55010 431 aaKnown RBP9.31□□□□□ -0.92
CASP4-205ENST00000525116 RAB15P59190 212 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 GTF2IP78347 998 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 SKOR1P84550 965 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 ZNF594Q96JF6 807 aaPredicted RBP9.31□□□□□ -0.92
CASP4-205ENST00000525116 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
CASP4-205ENST00000525116 DLEC1Q9Y238 1755 aa9.3□□□□□ -0.92
CASP4-205ENST00000525116 DDNO94850 711 aaPredicted RBP9.3□□□□□ -0.92
CASP4-205ENST00000525116 ARID5BQ14865 1188 aa9.3□□□□□ -0.92
CASP4-205ENST00000525116 PRR5LQ6MZQ0 368 aa9.3□□□□□ -0.92
CASP4-205ENST00000525116 BRIP1Q9BX63 1249 aa9.3□□□□□ -0.92
CASP4-205ENST00000525116 MRC1P22897 1456 aa9.29□□□□□ -0.92
CASP4-205ENST00000525116 U2SURPO15042 1029 aaKnown RBP9.29□□□□□ -0.92
CASP4-205ENST00000525116 DIAPH1O60610 1272 aaKnown RBP9.29□□□□□ -0.92
CASP4-205ENST00000525116 TEFQ10587 303 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms