RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 PLA2G12BQ9BX93 195 aa9.71□□□□□ -0.85
CHD7-202ENST00000524602 RTEL1Q9NZ71 1219 aa9.71□□□□□ -0.85
CHD7-202ENST00000524602 USP28Q96RU2 1077 aa9.71□□□□□ -0.86
CHD7-202ENST00000524602 ISCA1Q9BUE6 129 aa9.71□□□□□ -0.86
CHD7-202ENST00000524602 VGLL3A8MV65 326 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 CCDC57Q2TAC2 916 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 LRRC24Q50LG9 513 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 ADALQ6DHV7 355 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 PLCD3Q8N3E9 789 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 PAXBP1Q9Y5B6 917 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 M0R2C6 588 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 DHX8Q14562 1220 aaKnown RBP9.7□□□□□ -0.86
CHD7-202ENST00000524602 BRAPQ7Z569 592 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 DHX37Q8IY37 1157 aaKnown RBP9.7□□□□□ -0.86
CHD7-202ENST00000524602 MRPS27Q92552 414 aaKnown RBP9.7□□□□□ -0.86
CHD7-202ENST00000524602 YEATS4O95619 227 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 CCT2P78371 535 aaKnown RBP9.7□□□□□ -0.86
CHD7-202ENST00000524602 TTC39AQ5SRH9 613 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 CEP57L1Q8IYX8 460 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 ZNF710Q8N1W2 664 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 KCNG4Q8TDN1 519 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 GOLPH3LQ9H4A5 285 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 TOGARAM1Q9Y4F4 1720 aa9.7□□□□□ -0.86
CHD7-202ENST00000524602 SMTNL1A8MU46 457 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 ME1P48163 572 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 TCIRG1Q13488 830 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 APPBP2Q92624 585 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 OSBP2Q969R2 916 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 BPIFA3Q9BQP9 254 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 POLR3EQ9NVU0 708 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 BECN2A8MW95 431 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 RIOK3O14730 519 aaKnown RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 RBM6P78332 1123 aaKnown RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 ILDR1Q86SU0 546 aaPredicted RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 FSIP1Q8NA03 581 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 TEX13AQ9BXU3 409 aaPredicted RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 BTG4Q9NY30 223 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 ATRNO75882 1429 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 A1BGP04217 495 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 PCCAP05165 728 aaPredicted RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 CEBPZQ03701 1054 aaKnown RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 GORABQ5T7V8 394 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 C11orf57Q6ZUT1 292 aaPredicted RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 SMAP1Q8IYB5 467 aaPredicted RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 FMR1NBQ8N0W7 255 aaPredicted RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 ANKRD7Q92527 254 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 ZNF512BQ96KM6 892 aaPredicted RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 ZBTB3Q9H5J0 574 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 BCL2L12Q9HB09 334 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 NCOA5Q9HCD5 579 aaKnown RBP9.69□□□□□ -0.86
CHD7-202ENST00000524602 KCND1Q9NSA2 647 aa9.69□□□□□ -0.86
CHD7-202ENST00000524602 C4AP0C0L4 1744 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 C4BP0C0L5 1744 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 FDPSP14324 419 aaKnown RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 LRRC8AQ8IWT6 810 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 MB21D2Q8IYB1 491 aaPredicted RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 NCOA7Q8NI08 942 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 XAGE2Q96GT9 111 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 ZNF594Q96JF6 807 aaPredicted RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD7-202ENST00000524602 NRBP1Q9UHY1 535 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 CCDC9Q9Y3X0 531 aaKnown RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 CSF1RP07333 972 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 GSDMDP57764 484 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 DHX40Q8IX18 779 aaKnown RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 LINC00301Q8NCQ3 95 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 C8orf76Q96K31 380 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 PCDHA7Q9UN72 937 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 FKBP4Q02790 459 aaKnown RBP eCLIP9.68□□□□□ -0.86
CHD7-202ENST00000524602 FBXO18Q8NFZ0 1043 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 CACTINQ8WUQ7 758 aaKnown RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 IMPACTQ9P2X3 320 aa9.68□□□□□ -0.86
CHD7-202ENST00000524602 NAP1L2Q9ULW6 460 aaPredicted RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
CHD7-202ENST00000524602 CDHR2Q9BYE9 1310 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 COL16A1Q07092 1604 aaPredicted RBP9.67□□□□□ -0.86
CHD7-202ENST00000524602 PRC1O43663 620 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 LRMPQ12912 555 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 WASHC4Q2M389 1173 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 SLFNL1Q499Z3 407 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 PUS3Q9BZE2 481 aaKnown RBP9.67□□□□□ -0.86
CHD7-202ENST00000524602 AHDC1Q5TGY3 1603 aaPredicted RBP9.67□□□□□ -0.86
CHD7-202ENST00000524602 MYH3P11055 1940 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 FOXP2O15409 715 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 FGAP02671 866 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 TTF1Q15361 905 aaPredicted RBP9.67□□□□□ -0.86
CHD7-202ENST00000524602 RALYLQ86SE5 291 aaKnown RBP9.67□□□□□ -0.86
CHD7-202ENST00000524602 ZBTB38Q8NAP3 1195 aaPredicted RBP9.67□□□□□ -0.86
CHD7-202ENST00000524602 FTOQ9C0B1 505 aaKnown RBP eCLIP9.67□□□□□ -0.86
CHD7-202ENST00000524602 ANKRD36CQ5JPF3 1778 aa9.67□□□□□ -0.86
CHD7-202ENST00000524602 IGSF3O75054 1194 aa9.66□□□□□ -0.86
CHD7-202ENST00000524602 TNNT1P13805 278 aa9.66□□□□□ -0.86
CHD7-202ENST00000524602 IFIT5Q13325 482 aaKnown RBP9.66□□□□□ -0.86
CHD7-202ENST00000524602 STK38Q15208 465 aa9.66□□□□□ -0.86
CHD7-202ENST00000524602 ZRSR1Q15695 479 aaKnown RBP9.66□□□□□ -0.86
CHD7-202ENST00000524602 TTLL5Q6EMB2 1281 aa9.66□□□□□ -0.86
CHD7-202ENST00000524602 KIF6Q6ZMV9 814 aa9.66□□□□□ -0.86
CHD7-202ENST00000524602 COL22A1Q8NFW1 1626 aaPredicted RBP9.66□□□□□ -0.86
CHD7-202ENST00000524602 AKAP11Q9UKA4 1901 aa9.66□□□□□ -0.86
CHD7-202ENST00000524602 A0A0G2JLW4 131 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms