RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TRDNQ13061 729 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 RASGRF1Q13972 1273 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 SCARF1Q14162 830 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 ZNF804AQ7Z570 1209 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 AKT1S1Q96B36 256 aa11.86□□□□□ -0.51
VPS13B-212ENST00000524330 ZNF213O14771 459 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 GPAA1O43292 621 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 RPS6KB1P23443 525 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 ALDH1B1P30837 517 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 AK2P54819 239 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 CCDC129Q6ZRS4 1044 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 RALYLQ86SE5 291 aaKnown RBP11.85□□□□□ -0.51
VPS13B-212ENST00000524330 PROM2Q8N271 834 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 TTC14Q96N46 770 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 SEC62Q99442 399 aaKnown RBP11.85□□□□□ -0.51
VPS13B-212ENST00000524330 BRIP1Q9BX63 1249 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
VPS13B-212ENST00000524330 ZNF532Q9HCE3 1301 aa11.85□□□□□ -0.51
VPS13B-212ENST00000524330 M0R2C6 588 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 POLRMTO00411 1230 aaKnown RBP11.84□□□□□ -0.51
VPS13B-212ENST00000524330 APPP05067 770 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 HOXA10P31260 410 aaPredicted RBP11.84□□□□□ -0.51
VPS13B-212ENST00000524330 RAB3GAP1Q15042 981 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 CRY2Q49AN0 593 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 FBXO33Q7Z6M2 555 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 AMIGO3Q86WK7 504 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 MAGEB6Q8N7X4 407 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 OSBP2Q969R2 916 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 FOXD4L1Q9NU39 408 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 RAI14Q9P0K7 980 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 SMC3Q9UQE7 1217 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 KIF3AQ9Y496 699 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 AKAP11Q9UKA4 1901 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 ZMYM6O95789 1325 aa11.84□□□□□ -0.51
VPS13B-212ENST00000524330 NPR1P16066 1061 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 DDIT3P35638 169 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 GYG1P46976 350 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 GSTO1P78417 241 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 ALX1Q15699 326 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 C15orf52Q6ZUT6 534 aaKnown RBP11.83□□□□□ -0.52
VPS13B-212ENST00000524330 NOL8Q76FK4 1167 aaKnown RBP11.83□□□□□ -0.52
VPS13B-212ENST00000524330 DHX32Q7L7V1 743 aaKnown RBP11.83□□□□□ -0.52
VPS13B-212ENST00000524330 COL23A1Q86Y22 540 aaPredicted RBP11.83□□□□□ -0.52
VPS13B-212ENST00000524330 CERS3Q8IU89 383 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 WDR66Q8TBY9 1149 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 FAM84BQ96KN1 310 aaPredicted RBP11.83□□□□□ -0.52
VPS13B-212ENST00000524330 NOL10Q9BSC4 688 aaKnown RBP11.83□□□□□ -0.52
VPS13B-212ENST00000524330 GGA1Q9UJY5 639 aa11.83□□□□□ -0.52
VPS13B-212ENST00000524330 KLRG2A4D1S0 409 aaPredicted RBP11.82□□□□□ -0.52
VPS13B-212ENST00000524330 PATL2C9JE40 543 aaKnown RBP11.82□□□□□ -0.52
VPS13B-212ENST00000524330 CYP21A2P08686 494 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 PDCP20941 246 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 CYP7A1P22680 504 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 ZNF827Q17R98 1081 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 NAA16Q6N069 864 aaPredicted RBP11.82□□□□□ -0.52
VPS13B-212ENST00000524330 PI16Q6UXB8 463 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 SLF2Q8IX21 1173 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 CCDC24Q8N4L8 307 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 NCOA7Q8NI08 942 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 NAPBQ9H115 298 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 ABCF2Q9UG63 623 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 ATP6V1DQ9Y5K8 247 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 PNPLA7Q6ZV29 1317 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 WDR19Q8NEZ3 1342 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 WDR33Q9C0J8 1336 aaKnown RBP11.82□□□□□ -0.52
VPS13B-212ENST00000524330 A0A1B0GUL6 1792 aa11.82□□□□□ -0.52
VPS13B-212ENST00000524330 TNS1Q9HBL0 1735 aaKnown RBP11.81□□□□□ -0.52
VPS13B-212ENST00000524330 PPEF1O14829 653 aaPredicted RBP11.81□□□□□ -0.52
VPS13B-212ENST00000524330 LDHCP07864 332 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 MCM5P33992 734 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 DDR1Q08345 913 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 SLC15A2Q16348 729 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 SKOR2Q2VWA4 1001 aaPredicted RBP11.81□□□□□ -0.52
VPS13B-212ENST00000524330 ADCK5Q3MIX3 580 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 POTEAQ6S8J7 498 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 SP8Q8IXZ3 490 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 PUS7LQ9H0K6 701 aaKnown RBP11.81□□□□□ -0.52
VPS13B-212ENST00000524330 RNF41Q9H4P4 317 aaPredicted RBP11.81□□□□□ -0.52
VPS13B-212ENST00000524330 CNNM2Q9H8M5 875 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 DOCK2Q92608 1830 aa11.81□□□□□ -0.52
VPS13B-212ENST00000524330 DUOX1Q9NRD9 1551 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 MAGEB6P1A0A0J9YX57 407 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 TCRBV5S4A2TA0A5A2 114 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 E7EWF7 191 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 UFL1O94874 794 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 MBD4O95243 580 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 FGAP02671 866 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 MMP10P09238 476 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 MCM4P33991 863 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 TDO2P48775 406 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 NT5C2P49902 561 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 CCDC125Q86Z20 511 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 TBC1D22AQ8WUA7 517 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 MASTLQ96GX5 879 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 STRBPQ96SI9 672 aaKnown RBP11.8□□□□□ -0.52
VPS13B-212ENST00000524330 EYA3Q99504 573 aa11.8□□□□□ -0.52
VPS13B-212ENST00000524330 PODXL2Q9NZ53 605 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms