RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 EFCAB8A8MWE9 144 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 SPTLC2O15270 562 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 ZRANB2O95218 330 aaKnown RBP eCLIP11.89□□□□□ -0.51
SPIDR-225ENST00000524141 EVCP57679 992 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 GUCY1B3Q02153 619 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 EPHA10Q5JZY3 1008 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 DBNDD2Q9BQY9 259 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 TSPYL1Q9H0U9 437 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 DNAI1Q9UI46 699 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 NEDD4P46934 1319 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 FANCCQ00597 558 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 LRRFIP1Q32MZ4 808 aaKnown RBP11.89□□□□□ -0.51
SPIDR-225ENST00000524141 RGS22Q8NE09 1264 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 BBXQ8WY36 941 aaPredicted RBP11.89□□□□□ -0.51
SPIDR-225ENST00000524141 LRRC59Q96AG4 307 aaKnown RBP11.89□□□□□ -0.51
SPIDR-225ENST00000524141 MYD88Q99836 296 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 ST7Q9NRC1 585 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 AFDNP55196 1824 aaKnown RBP11.88□□□□□ -0.51
SPIDR-225ENST00000524141 ZSCAN12O43309 604 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 ZNF202O95125 648 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 NCAPHQ15003 741 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 SYNE3Q6ZMZ3 975 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 C8orf76Q96K31 380 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 GOLGA6L9A6NEM1 432 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 CMA1P23946 247 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 SLC20A2Q08357 652 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 CCDC158Q5M9N0 1113 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 ZMYM1Q5SVZ6 1142 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 PAG1Q9NWQ8 432 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 NDUFB9Q9Y6M9 179 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 SPEF2Q9C093 1822 aa11.88□□□□□ -0.51
SPIDR-225ENST00000524141 SLIT3O75094 1523 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 TADA3O75528 432 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 XAGE3Q8WTP9 111 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 FMNL2Q96PY5 1086 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 CLIC4Q9Y696 253 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 CAMTA1Q9Y6Y1 1673 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 HSPD1P10809 573 aaKnown RBP11.87□□□□□ -0.51
SPIDR-225ENST00000524141 FDPSP14324 419 aaKnown RBP11.87□□□□□ -0.51
SPIDR-225ENST00000524141 PLA2G4AP47712 749 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-225ENST00000524141 LRRN4CLQ8ND94 238 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 FBXO18Q8NFZ0 1043 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 MPHOSPH8Q99549 860 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 TMX1Q9H3N1 280 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.87□□□□□ -0.51
SPIDR-225ENST00000524141 C5P01031 1676 aa11.87□□□□□ -0.51
SPIDR-225ENST00000524141 TULP2O00295 520 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 BIN1O00499 593 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 CHGBP05060 677 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 LMOD1P29536 600 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-225ENST00000524141 UBASH3AP57075 661 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 MYL5Q02045 173 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 TRIM65Q6PJ69 517 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 ANKRD13DQ6ZTN6 518 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 TXLNBQ8N3L3 684 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 GOLIM4O00461 696 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 URI1O94763 535 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-225ENST00000524141 SERPINC1P01008 464 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 KCNA6P17658 529 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 GTF2E1P29083 439 aaPredicted RBP11.86□□□□□ -0.51
SPIDR-225ENST00000524141 GPS2Q13227 327 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 GORABQ5T7V8 394 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 ZNF790Q6PG37 636 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 COPS6Q7L5N1 327 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 GPR108Q9NPR9 543 aa11.86□□□□□ -0.51
SPIDR-225ENST00000524141 MYL6BP14649 208 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 PFKFB1P16118 471 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 ANO1Q5XXA6 986 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 THEMISQ8N1K5 641 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-225ENST00000524141 JMYQ8N9B5 988 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 ANKRD24Q8TF21 1146 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 TUBE1Q9UJT0 475 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 POLR3DP05423 398 aaPredicted RBP11.85□□□□□ -0.51
SPIDR-225ENST00000524141 CFAP100Q494V2 611 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 GPR161Q8N6U8 529 aaKnown RBP11.85□□□□□ -0.51
SPIDR-225ENST00000524141 PARP3Q9Y6F1 533 aa11.85□□□□□ -0.51
SPIDR-225ENST00000524141 TOP1P11387 765 aaKnown RBP11.84□□□□□ -0.51
SPIDR-225ENST00000524141 AXDND1Q5T1B0 1012 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-225ENST00000524141 VSTM4Q8IW00 320 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
SPIDR-225ENST00000524141 CPLX1O14810 134 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 RNF113AO15541 343 aaKnown RBP11.84□□□□□ -0.51
SPIDR-225ENST00000524141 SYKP43405 635 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 REXO1L1PQ8IX06 675 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 UTP14AQ9BVJ6 771 aaKnown RBP11.84□□□□□ -0.51
SPIDR-225ENST00000524141 MAST3O60307 1309 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 ATP1A3P13637 1013 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 HNRNPH2P55795 449 aaKnown RBP11.84□□□□□ -0.51
SPIDR-225ENST00000524141 SLC39A14Q15043 492 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 OLFM4Q6UX06 510 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 CARD6Q9BX69 1037 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 UBXN6Q9BZV1 441 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 HSD3B7Q9H2F3 369 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 SCN11AQ9UI33 1791 aa11.84□□□□□ -0.51
SPIDR-225ENST00000524141 ARFGEF2Q9Y6D5 1785 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms