RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 RESTQ13127 1097 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 DHX8Q14562 1220 aaKnown RBP11.75□□□□□ -0.53
SPIDR-224ENST00000524126 BRD3Q15059 726 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 MAP9Q49MG5 647 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 BIN1O00499 593 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
SPIDR-224ENST00000524126 PDCP20941 246 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 HSP90AB3PQ58FF7 597 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 PI4K2BQ8TCG2 481 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 PPP2R2CQ9Y2T4 447 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 PEAK1Q9H792 1746 aa11.75□□□□□ -0.53
SPIDR-224ENST00000524126 CCP110O43303 1012 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 KINO60870 393 aaKnown RBP11.74□□□□□ -0.53
SPIDR-224ENST00000524126 TFRCP02786 760 aaKnown RBP11.74□□□□□ -0.53
SPIDR-224ENST00000524126 ATP1A3P13637 1013 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 IL13P35225 146 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 EIF5P55010 431 aaKnown RBP11.74□□□□□ -0.53
SPIDR-224ENST00000524126 NLRP6P59044 892 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 DPF2Q92785 391 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 KIFC2Q96AC6 838 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 SLC24A3Q9HC58 644 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 OVOS2A0A0J9YW53 1432 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 OVOS2Q6IE36 1432 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
SPIDR-224ENST00000524126 IBSPP21815 317 aaPredicted RBP11.74□□□□□ -0.53
SPIDR-224ENST00000524126 LMOD1P29536 600 aaPredicted RBP11.74□□□□□ -0.53
SPIDR-224ENST00000524126 KARSQ15046 597 aaKnown RBP11.74□□□□□ -0.53
SPIDR-224ENST00000524126 BRF1Q92994 677 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 MPHOSPH8Q99549 860 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 L1RE1Q9UN81 338 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 PIK3C2AO00443 1686 aa11.74□□□□□ -0.53
SPIDR-224ENST00000524126 CTAGE5O15320 804 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 JAKMIP3Q5VZ66 844 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-224ENST00000524126 PHF8Q9UPP1 1060 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 MAP3K19Q56UN5 1328 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 RHOXF2BP0C7M4 288 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 CCT5P48643 541 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 CHMP4BP1P59074 171 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 BIRC2Q13490 618 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 CASP8Q14790 479 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 LMOD2Q6P5Q4 547 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 CCDC73Q6ZRK6 1079 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 CEP120Q8N960 986 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 RHOXF2Q9BQY4 288 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 TAF6LQ9Y6J9 622 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 DLG5Q8TDM6 1919 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 LRRIQ3A6PVS8 624 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-224ENST00000524126 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 FANCCQ00597 558 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 EIF4A2Q14240 407 aaKnown RBP11.73□□□□□ -0.53
SPIDR-224ENST00000524126 HSP90B2PQ58FF3 399 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 TOGARAM2Q6ZUX3 1019 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 FSIP1Q8NA03 581 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 FAM71BQ8TC56 605 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 CCDC12Q8WUD4 166 aaPredicted RBP11.73□□□□□ -0.53
SPIDR-224ENST00000524126 NAT10Q9H0A0 1025 aaKnown RBP11.73□□□□□ -0.53
SPIDR-224ENST00000524126 MIS18AQ9NYP9 233 aa11.73□□□□□ -0.53
SPIDR-224ENST00000524126 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 TMEM232C9JQI7 657 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 PPP1R12AO14974 1030 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-224ENST00000524126 RNF40O75150 1001 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 VSNL1P62760 191 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 TTC19Q6DKK2 380 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-224ENST00000524126 GBP6Q6ZN66 633 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 GIMAP7Q8NHV1 300 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 FAM169AQ9Y6X4 670 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 WDHD1O75717 1129 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-224ENST00000524126 PAX7P23759 505 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 SCRN1Q12765 414 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 GRIPAP1Q4V328 841 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 MCM10Q7L590 875 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 CNTROBQ8N137 903 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 ENGASEQ8NFI3 743 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 LTV1Q96GA3 475 aaPredicted RBP11.72□□□□□ -0.53
SPIDR-224ENST00000524126 DESI2Q9BSY9 194 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 EHD4Q9H223 541 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 CD248Q9HCU0 757 aa11.72□□□□□ -0.53
SPIDR-224ENST00000524126 H3BQV1 296 aa11.71□□□□□ -0.53
SPIDR-224ENST00000524126 ZSCAN12O43309 604 aa11.71□□□□□ -0.53
SPIDR-224ENST00000524126 IFFO2Q5TF58 517 aa11.71□□□□□ -0.53
SPIDR-224ENST00000524126 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.53
SPIDR-224ENST00000524126 ERC1Q8IUD2 1116 aa11.71□□□□□ -0.53
SPIDR-224ENST00000524126 TMEM139Q8IV31 216 aa11.71□□□□□ -0.53
SPIDR-224ENST00000524126 AFAP1L1Q8TED9 768 aa11.71□□□□□ -0.53
SPIDR-224ENST00000524126 HNRNPLLQ8WVV9 542 aaKnown RBP11.71□□□□□ -0.53
SPIDR-224ENST00000524126 MYO1FO00160 1098 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 NEBLO76041 1014 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.54
SPIDR-224ENST00000524126 ATP2B2Q01814 1243 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.54
SPIDR-224ENST00000524126 NCAPHQ15003 741 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 CREB3L3Q68CJ9 461 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 RIN2Q8WYP3 895 aaPredicted RBP11.71□□□□□ -0.54
SPIDR-224ENST00000524126 MIEF2Q96C03 454 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 FAXDC2Q96IV6 333 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 TM6SF1Q9BZW5 370 aa11.71□□□□□ -0.54
SPIDR-224ENST00000524126 GNL3LQ9NVN8 582 aaKnown RBP11.71□□□□□ -0.54
SPIDR-224ENST00000524126 RBM8AQ9Y5S9 174 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms