RNA–Protein interactions for RNA: ENST00000523799.5

CCNC-215, Transcript of cyclin C, humanhuman

TSL 3 BASIC

Gene CCNC, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-215ENST00000523799 ERO1AQ96HE7 468 aa11.06□□□□□ -0.64
CCNC-215ENST00000523799 R3HDMLQ9H3Y0 253 aa11.06□□□□□ -0.64
CCNC-215ENST00000523799 KCNQ5Q9NR82 932 aa11.06□□□□□ -0.64
CCNC-215ENST00000523799 PTPN22Q9Y2R2 807 aa11.06□□□□□ -0.64
CCNC-215ENST00000523799 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
CCNC-215ENST00000523799 LAMB1P07942 1786 aa11.05□□□□□ -0.64
CCNC-215ENST00000523799 KDM3BQ7LBC6 1761 aa11.05□□□□□ -0.64
CCNC-215ENST00000523799 H0YGN5 161 aa11.05□□□□□ -0.64
CCNC-215ENST00000523799 AGBL3Q8NEM8 1001 aa11.05□□□□□ -0.64
CCNC-215ENST00000523799 PNISRQ8TF01 805 aaKnown RBP11.05□□□□□ -0.64
CCNC-215ENST00000523799 RSPH6AQ9H0K4 717 aa11.05□□□□□ -0.64
CCNC-215ENST00000523799 LAMA3Q16787 3333 aa11.05□□□□□ -0.64
CCNC-215ENST00000523799 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
CCNC-215ENST00000523799 HCLS1P14317 486 aaPredicted RBP11.04□□□□□ -0.64
CCNC-215ENST00000523799 POTEEQ6S8J3 1075 aa11.04□□□□□ -0.64
CCNC-215ENST00000523799 ZNF454Q8N9F8 522 aa11.04□□□□□ -0.64
CCNC-215ENST00000523799 ZC3H12CQ9C0D7 883 aaKnown RBP11.04□□□□□ -0.64
CCNC-215ENST00000523799 MYOZ2Q9NPC6 264 aa11.04□□□□□ -0.64
CCNC-215ENST00000523799 POLLQ9UGP5 575 aa11.04□□□□□ -0.64
CCNC-215ENST00000523799 MANSC4A6NHS7 340 aaPredicted RBP11.03□□□□□ -0.64
CCNC-215ENST00000523799 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
CCNC-215ENST00000523799 HSP90AB3PQ58FF7 597 aa11.03□□□□□ -0.64
CCNC-215ENST00000523799 PPP4R3BQ5MIZ7 849 aa11.03□□□□□ -0.64
CCNC-215ENST00000523799 RSBN1LQ6PCB5 846 aaPredicted RBP11.03□□□□□ -0.64
CCNC-215ENST00000523799 ARMC9Q7Z3E5 817 aa11.03□□□□□ -0.64
CCNC-215ENST00000523799 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
CCNC-215ENST00000523799 EFCC1Q9HA90 598 aa11.03□□□□□ -0.64
CCNC-215ENST00000523799 SH3TC1Q8TE82 1336 aa11.03□□□□□ -0.64
CCNC-215ENST00000523799 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
CCNC-215ENST00000523799 GPSM2P81274 684 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 DCTN1Q14203 1278 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 NLRP10Q86W26 655 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 TBC1D16Q8TBP0 767 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 ZNF333Q96JL9 665 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 MIS18AQ9NYP9 233 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 TRMT112Q9UI30 125 aaKnown RBP11.02□□□□□ -0.65
CCNC-215ENST00000523799 PCDHGA10Q9Y5H3 936 aa11.02□□□□□ -0.65
CCNC-215ENST00000523799 EIF4A1P60842 406 aaKnown RBP11.01□□□□□ -0.65
CCNC-215ENST00000523799 PTPN12Q05209 780 aaKnown RBP11.01□□□□□ -0.65
CCNC-215ENST00000523799 ARHGEF6Q15052 776 aa11.01□□□□□ -0.65
CCNC-215ENST00000523799 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
CCNC-215ENST00000523799 RBM27Q9P2N5 1060 aaKnown RBP11.01□□□□□ -0.65
CCNC-215ENST00000523799 NUDCQ9Y266 331 aa11.01□□□□□ -0.65
CCNC-215ENST00000523799 ZBTB48P10074 688 aaPredicted RBP11□□□□□ -0.65
CCNC-215ENST00000523799 SLC4A8Q2Y0W8 1093 aa11□□□□□ -0.65
CCNC-215ENST00000523799 SLC9C1Q4G0N8 1177 aa11□□□□□ -0.65
CCNC-215ENST00000523799 LDLRAD1Q5T700 205 aa11□□□□□ -0.65
CCNC-215ENST00000523799 PRAMEF18Q5VWM3 479 aa11□□□□□ -0.65
CCNC-215ENST00000523799 OTUD7BQ6GQQ9 843 aa11□□□□□ -0.65
CCNC-215ENST00000523799 CD99L2Q8TCZ2 262 aa11□□□□□ -0.65
CCNC-215ENST00000523799 DDX12PQ92771 950 aa11□□□□□ -0.65
CCNC-215ENST00000523799 CFAP53Q96M91 514 aa11□□□□□ -0.65
CCNC-215ENST00000523799 GMLQ99445 158 aa11□□□□□ -0.65
CCNC-215ENST00000523799 PODXL2Q9NZ53 605 aa11□□□□□ -0.65
CCNC-215ENST00000523799 DLG5Q8TDM6 1919 aa10.99□□□□□ -0.65
CCNC-215ENST00000523799 PER1O15534 1290 aaPredicted RBP10.99□□□□□ -0.65
CCNC-215ENST00000523799 MMP14P50281 582 aa10.99□□□□□ -0.65
CCNC-215ENST00000523799 SP3Q02447 781 aa10.99□□□□□ -0.65
CCNC-215ENST00000523799 SF3B3Q15393 1217 aaKnown RBP10.99□□□□□ -0.65
CCNC-215ENST00000523799 CELF1Q92879 486 aaKnown RBP10.99□□□□□ -0.65
CCNC-215ENST00000523799 SLC10A4Q96EP9 437 aa10.99□□□□□ -0.65
CCNC-215ENST00000523799 NBPF9Q3BBW0 867 aa10.98□□□□□ -0.65
CCNC-215ENST00000523799 LRP10Q7Z4F1 713 aa10.98□□□□□ -0.65
CCNC-215ENST00000523799 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
CCNC-215ENST00000523799 ZDHHC16Q969W1 377 aa10.98□□□□□ -0.65
CCNC-215ENST00000523799 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
CCNC-215ENST00000523799 A0A1W2PPC1 479 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 USP17L3A6NCW0 530 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 USP17L4A6NCW7 530 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 UNCXA6NJT0 531 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 IGF2BP3O00425 579 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCNC-215ENST00000523799 U2AF1L5P0DN76 240 aaPredicted RBP10.97□□□□□ -0.65
CCNC-215ENST00000523799 RPS8P62241 208 aaKnown RBP10.97□□□□□ -0.65
CCNC-215ENST00000523799 U2AF1Q01081 240 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCNC-215ENST00000523799 CRHR2Q13324 411 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 USP17L1Q7RTZ2 530 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 PODNQ7Z5L7 613 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 APOBEC3FQ8IUX4 373 aaKnown RBP10.97□□□□□ -0.65
CCNC-215ENST00000523799 DPF3Q92784 378 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 ANKIB1Q9P2G1 1089 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 GGA1Q9UJY5 639 aa10.97□□□□□ -0.65
CCNC-215ENST00000523799 ANGEL1Q9UNK9 670 aaKnown RBP10.97□□□□□ -0.65
CCNC-215ENST00000523799 ZNF646O15015 1829 aaPredicted RBP10.97□□□□□ -0.65
CCNC-215ENST00000523799 WNT10BO00744 389 aa10.96□□□□□ -0.65
CCNC-215ENST00000523799 UFL1O94874 794 aa10.96□□□□□ -0.65
CCNC-215ENST00000523799 PRKG1Q13976 671 aa10.96□□□□□ -0.65
CCNC-215ENST00000523799 NBR1Q14596 966 aa10.96□□□□□ -0.65
CCNC-215ENST00000523799 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
CCNC-215ENST00000523799 THUMPD2Q9BTF0 503 aaKnown RBP10.96□□□□□ -0.65
CCNC-215ENST00000523799 PCGF6Q9BYE7 350 aa10.96□□□□□ -0.65
CCNC-215ENST00000523799 PRO3102Q9H379 93 aa10.96□□□□□ -0.65
CCNC-215ENST00000523799 COL1A1P02452 1464 aaPredicted RBP10.95□□□□□ -0.66
CCNC-215ENST00000523799 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
CCNC-215ENST00000523799 MAP3K11Q16584 847 aa10.95□□□□□ -0.66
CCNC-215ENST00000523799 WNK4Q96J92 1243 aa10.95□□□□□ -0.66
CCNC-215ENST00000523799 EPAS1Q99814 870 aa10.95□□□□□ -0.66
CCNC-215ENST00000523799 NR2E3Q9Y5X4 410 aa10.95□□□□□ -0.66
CCNC-215ENST00000523799 PTCH2Q9Y6C5 1203 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms