RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 SLC4A8Q2Y0W8 1093 aa12.65□□□□□ -0.38
LAMA4-220ENST00000523765 SLC9C1Q4G0N8 1177 aa12.65□□□□□ -0.38
LAMA4-220ENST00000523765 KIAA0825Q8IV33 1275 aa12.65□□□□□ -0.38
LAMA4-220ENST00000523765 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
LAMA4-220ENST00000523765 CUL9Q8IWT3 2517 aa12.65□□□□□ -0.38
LAMA4-220ENST00000523765 VCANP13611 3396 aa12.64□□□□□ -0.39
LAMA4-220ENST00000523765 CENPBP07199 599 aaPredicted RBP12.64□□□□□ -0.39
LAMA4-220ENST00000523765 APOBEC3FQ8IUX4 373 aaKnown RBP12.64□□□□□ -0.39
LAMA4-220ENST00000523765 LRCH3Q96II8 777 aa12.64□□□□□ -0.39
LAMA4-220ENST00000523765 DEFB129Q9H1M3 183 aa12.64□□□□□ -0.39
LAMA4-220ENST00000523765 ZBTB47Q9UFB7 747 aaPredicted RBP12.64□□□□□ -0.39
LAMA4-220ENST00000523765 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
LAMA4-220ENST00000523765 ATP2B4P23634 1241 aa12.63□□□□□ -0.39
LAMA4-220ENST00000523765 MTFR1Q15390 333 aa12.63□□□□□ -0.39
LAMA4-220ENST00000523765 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
LAMA4-220ENST00000523765 OGFOD1Q8N543 542 aa12.63□□□□□ -0.39
LAMA4-220ENST00000523765 LAMA2P24043 3122 aaKnown RBP12.62□□□□□ -0.39
LAMA4-220ENST00000523765 SPTBN5Q9NRC6 3674 aaKnown RBP12.62□□□□□ -0.39
LAMA4-220ENST00000523765 TESPA1A2RU30 521 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-220ENST00000523765 USP2O75604 605 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-220ENST00000523765 ECM2O94769 699 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-220ENST00000523765 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
LAMA4-220ENST00000523765 STRIP1Q5VSL9 837 aa12.62□□□□□ -0.39
LAMA4-220ENST00000523765 ZBTB38Q8NAP3 1195 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-220ENST00000523765 MS4A4AQ96JQ5 239 aa12.62□□□□□ -0.39
LAMA4-220ENST00000523765 COL1A1P02452 1464 aaPredicted RBP12.61□□□□□ -0.39
LAMA4-220ENST00000523765 MYH3P11055 1940 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 RIPK4P57078 832 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 CDAN1Q8IWY9 1227 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 CERS5Q8N5B7 392 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 BRI3BPQ8WY22 251 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 DPF3Q92784 378 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 ELP3Q9H9T3 547 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 MINPP1Q9UNW1 487 aa12.61□□□□□ -0.39
LAMA4-220ENST00000523765 NEFMP07197 916 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 CCT4P50991 539 aaKnown RBP12.6□□□□□ -0.39
LAMA4-220ENST00000523765 GTF2IP78347 998 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 TTLL5Q6EMB2 1281 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 UBE2Q1Q7Z7E8 422 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 NBPF11Q86T75 865 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 ANKRD18AQ8IVF6 992 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 FAM43AQ8N2R8 423 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 MYD88Q99836 296 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 PHAXQ9H814 394 aaKnown RBP12.6□□□□□ -0.39
LAMA4-220ENST00000523765 A0A1B0GUL6 1792 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 ALPK3Q96L96 1907 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
LAMA4-220ENST00000523765 CHL1O00533 1208 aa12.59□□□□□ -0.39
LAMA4-220ENST00000523765 PDE8AO60658 829 aa12.59□□□□□ -0.39
LAMA4-220ENST00000523765 CTGFP29279 349 aa12.59□□□□□ -0.39
LAMA4-220ENST00000523765 OPTNQ96CV9 577 aa12.59□□□□□ -0.39
LAMA4-220ENST00000523765 BABAM1Q9NWV8 329 aa12.59□□□□□ -0.39
LAMA4-220ENST00000523765 SNAP23O00161 211 aa12.58□□□□□ -0.4
LAMA4-220ENST00000523765 GALR2O43603 387 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-220ENST00000523765 PPP1R12BO60237 982 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-220ENST00000523765 PCCAP05165 728 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-220ENST00000523765 TAF1CQ15572 869 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-220ENST00000523765 PRMT6Q96LA8 375 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-220ENST00000523765 COA1Q9GZY4 146 aa12.58□□□□□ -0.4
LAMA4-220ENST00000523765 GREM2Q9H772 168 aa12.58□□□□□ -0.4
LAMA4-220ENST00000523765 DBF4Q9UBU7 674 aaPredicted RBP12.58□□□□□ -0.4
LAMA4-220ENST00000523765 LAS1LQ9Y4W2 734 aaKnown RBP12.58□□□□□ -0.4
LAMA4-220ENST00000523765 ZNF804BA4D1E1 1349 aa12.58□□□□□ -0.4
LAMA4-220ENST00000523765 F8W031 263 aaPredicted RBP12.57□□□□□ -0.4
LAMA4-220ENST00000523765 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
LAMA4-220ENST00000523765 DLGAP5Q15398 846 aa12.57□□□□□ -0.4
LAMA4-220ENST00000523765 OTUD7BQ6GQQ9 843 aa12.57□□□□□ -0.4
LAMA4-220ENST00000523765 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
LAMA4-220ENST00000523765 RIC3Q7Z5B4 369 aa12.57□□□□□ -0.4
LAMA4-220ENST00000523765 ARAP2Q8WZ64 1704 aa12.57□□□□□ -0.4
LAMA4-220ENST00000523765 CCL15-CCL14A0A0B4J2E2 113 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 ZBTB7BO15156 539 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-220ENST00000523765 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 CCL15Q16663 113 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 ANKRD13AQ8IZ07 590 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 TTLL11Q8NHH1 800 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 BSDC1Q9NW68 430 aaPredicted RBP12.56□□□□□ -0.4
LAMA4-220ENST00000523765 JAG2Q9Y219 1238 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 IRS2Q9Y4H2 1338 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 PRUNE2Q8WUY3 3088 aa12.56□□□□□ -0.4
LAMA4-220ENST00000523765 IREB2P48200 963 aaKnown RBP12.55□□□□□ -0.4
LAMA4-220ENST00000523765 CTSWP56202 376 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 LACTBP83111 547 aaPredicted RBP12.55□□□□□ -0.4
LAMA4-220ENST00000523765 RASA3Q14644 834 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 CFAP100Q494V2 611 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 Q7L0L9 218 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 MTMR14Q8NCE2 650 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 ZFYVE28Q9HCC9 887 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 TRIM35Q9UPQ4 493 aa12.55□□□□□ -0.4
LAMA4-220ENST00000523765 CLCN6P51797 869 aa12.54□□□□□ -0.4
LAMA4-220ENST00000523765 DUSP27Q5VZP5 1158 aa12.54□□□□□ -0.4
LAMA4-220ENST00000523765 CCDC191Q8NCU4 936 aa12.54□□□□□ -0.4
LAMA4-220ENST00000523765 COL25A1Q9BXS0 654 aaPredicted RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms