RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 EIF1AXP47813 144 aaKnown RBP8.1□□□□□ -1.11
NSMCE2-211ENST00000523549 BEND4Q6ZU67 534 aa8.1□□□□□ -1.11
NSMCE2-211ENST00000523549 SERPINA10Q9UK55 444 aa8.1□□□□□ -1.11
NSMCE2-211ENST00000523549 HIF3AQ9Y2N7 669 aa8.1□□□□□ -1.11
NSMCE2-211ENST00000523549 SART1O43290 800 aaKnown RBP8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 NPR3P17342 541 aa8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 GRIK1P39086 918 aa8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 IRAK1P51617 712 aa8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 NLRP12P59046 1061 aa8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 VN1R5Q7Z5H4 357 aa8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 SHKBP1Q8TBC3 707 aa8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
NSMCE2-211ENST00000523549 PAX4O43316 350 aa8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 PCSK2P16519 638 aa8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 TAL1P17542 331 aaPredicted RBP8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 MPSTP25325 297 aa8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 SSFA2P28290 1259 aa8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 C19orf57Q0VDD7 668 aa8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 C8orf34Q49A92 452 aa8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 SLC7A3Q8WY07 619 aa8.08□□□□□ -1.12
NSMCE2-211ENST00000523549 GTF3C2Q8WUA4 911 aaPredicted RBP8.07□□□□□ -1.12
NSMCE2-211ENST00000523549 BSNDQ8WZ55 320 aa8.07□□□□□ -1.12
NSMCE2-211ENST00000523549 OSMRQ99650 979 aa8.07□□□□□ -1.12
NSMCE2-211ENST00000523549 ZKSCAN3Q9BRR0 538 aa8.07□□□□□ -1.12
NSMCE2-211ENST00000523549 TMPRSS13Q9BYE2 586 aa8.07□□□□□ -1.12
NSMCE2-211ENST00000523549 KCNF1Q9H3M0 494 aa8.07□□□□□ -1.12
NSMCE2-211ENST00000523549 TMEM88BA6NKF7 163 aa8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 EREGO14944 169 aa8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 ARL4DP49703 201 aa8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 ALKBH2Q6NS38 261 aa8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 SMG8Q8ND04 991 aaKnown RBP8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 CCDC97Q96F63 343 aaPredicted RBP8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 SUGCTQ9HAC7 445 aa8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 POLIQ9UNA4 740 aa8.06□□□□□ -1.12
NSMCE2-211ENST00000523549 TNFRSF21O75509 655 aa8.05□□□□□ -1.12
NSMCE2-211ENST00000523549 TIAF1O95411 115 aa8.05□□□□□ -1.12
NSMCE2-211ENST00000523549 DLGAP3O95886 979 aa8.05□□□□□ -1.12
NSMCE2-211ENST00000523549 FDX2Q6P4F2 183 aa8.05□□□□□ -1.12
NSMCE2-211ENST00000523549 SOX17Q9H6I2 414 aaPredicted RBP8.05□□□□□ -1.12
NSMCE2-211ENST00000523549 WDR64B1ANS9 1081 aa8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 WNT11O96014 354 aa8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 MAP4P27816 1152 aaKnown RBP8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 TXKP42681 527 aa8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 IKBKEQ14164 716 aa8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 PEAR1Q5VY43 1037 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 TTC16Q8NEE8 873 aa8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 BHLHE41Q9C0J9 482 aaPredicted RBP8.04□□□□□ -1.12
NSMCE2-211ENST00000523549 LOC100289279A0A1B0GTE1 492 aa8.03□□□□□ -1.12
NSMCE2-211ENST00000523549 HOXA10P31260 410 aaPredicted RBP8.03□□□□□ -1.12
NSMCE2-211ENST00000523549 MTMR3Q13615 1198 aa8.03□□□□□ -1.12
NSMCE2-211ENST00000523549 SGO2Q562F6 1265 aa8.03□□□□□ -1.12
NSMCE2-211ENST00000523549 SHROOM4Q9ULL8 1493 aa8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 F13BP05160 661 aa8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 ESRRAP11474 423 aaPredicted RBP8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 EDN3P14138 238 aa8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 NUTM2GQ5VZR2 741 aa8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 C12orf50Q8NA57 414 aaPredicted RBP8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 MFSD14AQ96MC6 490 aa8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 FOXD3Q9UJU5 478 aaPredicted RBP8.02□□□□□ -1.13
NSMCE2-211ENST00000523549 RIMBP3CA6NJZ7 1639 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 RIMBP3BA6NNM3 1639 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 RIMBP3Q9UFD9 1639 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 FZD6O60353 706 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 PHACTR2O75167 634 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 EHHADHQ08426 723 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 EXOSC6Q5RKV6 272 aaKnown RBP8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 PHLDB3Q6NSJ2 640 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 SHISA5Q8N114 240 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 SNX29Q8TEQ0 813 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 CYP4F12Q9HCS2 524 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 PIM2Q9P1W9 311 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 ADGRE2Q9UHX3 823 aa8.01□□□□□ -1.13
NSMCE2-211ENST00000523549 BTBD11A6QL63 1104 aa8□□□□□ -1.13
NSMCE2-211ENST00000523549 GAS2O43903 313 aaKnown RBP8□□□□□ -1.13
NSMCE2-211ENST00000523549 USP5P45974 858 aa8□□□□□ -1.13
NSMCE2-211ENST00000523549 NRSN2Q9GZP1 204 aa8□□□□□ -1.13
NSMCE2-211ENST00000523549 ZFYVE28Q9HCC9 887 aa8□□□□□ -1.13
NSMCE2-211ENST00000523549 LATS2Q9NRM7 1088 aa8□□□□□ -1.13
NSMCE2-211ENST00000523549 FAM13AO94988 1023 aa7.99□□□□□ -1.13
NSMCE2-211ENST00000523549 DRD2P14416 443 aa7.99□□□□□ -1.13
NSMCE2-211ENST00000523549 MSMPQ1L6U9 139 aa7.99□□□□□ -1.13
NSMCE2-211ENST00000523549 THOC2Q8NI27 1593 aaKnown RBP7.99□□□□□ -1.13
NSMCE2-211ENST00000523549 ARID3CA6NKF2 412 aa7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 FOSL1P15407 271 aa7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 CDPF1Q6NVV7 123 aa7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 GJD3Q8N144 294 aa7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 C2CD4AQ8NCU7 369 aaPredicted RBP7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 ASAP3Q8TDY4 903 aa7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 EZH1Q92800 747 aaPredicted RBP7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 AMOTL2Q9Y2J4 779 aa7.98□□□□□ -1.13
NSMCE2-211ENST00000523549 FAM95CA0A1B0GW59 222 aa7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 FKBP4Q02790 459 aaKnown RBP eCLIP7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 SOX4Q06945 474 aaPredicted RBP7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 CPSF6Q16630 551 aaKnown RBP eCLIP7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 NFXL1Q6ZNB6 911 aa7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 GIMAP7Q8NHV1 300 aa7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 ATG3Q9NT62 314 aa7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 CCDC87Q9NVE4 849 aa7.97□□□□□ -1.13
NSMCE2-211ENST00000523549 LEMD3Q9Y2U8 911 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms