RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 BCORQ6W2J9 1755 aa9.71□□□□□ -0.86
CSMD1-213ENST00000523488 WDR17Q8IZU2 1322 aa9.71□□□□□ -0.86
CSMD1-213ENST00000523488 NID2Q14112 1375 aa9.71□□□□□ -0.86
CSMD1-213ENST00000523488 BCL9O00512 1426 aa9.71□□□□□ -0.86
CSMD1-213ENST00000523488 UBR2Q8IWV8 1755 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 PNMA6EA0A0J9YXQ4 647 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 SART3Q15020 963 aaKnown RBP9.7□□□□□ -0.86
CSMD1-213ENST00000523488 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 AMOTL1Q8IY63 956 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 DDX11Q96FC9 970 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 CXorf56Q9H5V9 222 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 ALDH1L1O75891 902 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 URI1O94763 535 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-213ENST00000523488 FSBPO95073 299 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 INHBEP58166 350 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 SYTL4Q96C24 671 aaPredicted RBP9.7□□□□□ -0.86
CSMD1-213ENST00000523488 FAM107BQ9H098 131 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 ANO10Q9NW15 660 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 MST1RQ04912 1400 aa9.7□□□□□ -0.86
CSMD1-213ENST00000523488 TMCO5BA8MYB1 307 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 EIF5P55010 431 aaKnown RBP9.69□□□□□ -0.86
CSMD1-213ENST00000523488 E2F4Q16254 413 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 NT5DC1Q5TFE4 455 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 RPS6KB1P23443 525 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 PBX1P40424 430 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 FAM160A1Q05DH4 1040 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 PLCB4Q15147 1175 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 LONRF2Q1L5Z9 754 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 ADCK5Q3MIX3 580 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 TSHZ3Q63HK5 1081 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 WAPLQ7Z5K2 1190 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 TADA2BQ86TJ2 420 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 VSTM4Q8IW00 320 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 CCDC83Q8IWF9 413 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 SH3GL2Q99962 352 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 HMG20BQ9P0W2 317 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 MCM8Q9UJA3 840 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 HPSEQ9Y251 543 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 USP16Q9Y5T5 823 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 DIP2BQ9P265 1576 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 LRP5O75197 1615 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 NHSL1Q5SYE7 1610 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 RTN2O75298 545 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 SEC31AO94979 1220 aaKnown RBP9.69□□□□□ -0.86
CSMD1-213ENST00000523488 KAT2BQ92831 832 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 PARD6BQ9BYG5 372 aa9.69□□□□□ -0.86
CSMD1-213ENST00000523488 GRIN2DO15399 1336 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 SYF2O95926 243 aaKnown RBP9.68□□□□□ -0.86
CSMD1-213ENST00000523488 EPB41P11171 864 aaKnown RBP9.68□□□□□ -0.86
CSMD1-213ENST00000523488 UBE3BQ7Z3V4 1068 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 EGFL6Q8IUX8 553 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 ARFGAP3Q9NP61 516 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 AMPD2Q01433 879 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 LARP1BQ659C4 914 aaKnown RBP9.68□□□□□ -0.86
CSMD1-213ENST00000523488 TMEM132EQ6IEE7 984 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 SPATA32Q96LK8 384 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 THUMPD2Q9BTF0 503 aaKnown RBP9.68□□□□□ -0.86
CSMD1-213ENST00000523488 INTS13Q9NVM9 706 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 EMILIN1Q9Y6C2 1016 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 ZNF18P17022 549 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 FAXDC2Q96IV6 333 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 GGNBP2Q9H3C7 697 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 RTEL1Q9NZ71 1219 aa9.68□□□□□ -0.86
CSMD1-213ENST00000523488 DTNBO60941 627 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 SMC2O95347 1197 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 TDO2P48775 406 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 CCAR1Q8IX12 1150 aaKnown RBP9.67□□□□□ -0.86
CSMD1-213ENST00000523488 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 USP44Q9H0E7 712 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 PDRG1Q9NUG6 133 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 RGPD8O14715 1765 aaPredicted RBP9.67□□□□□ -0.86
CSMD1-213ENST00000523488 ARHGAP6O43182 974 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 SRGAP3O43295 1099 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 SKOR1P84550 965 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 SKIDA1Q1XH10 827 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 TLDC1Q6P9B6 456 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 TFIP11Q9UBB9 837 aaKnown RBP9.67□□□□□ -0.86
CSMD1-213ENST00000523488 MYH2Q9UKX2 1941 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 DISP2A7MBM2 1401 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 KLHL33A6NCF5 533 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 STX10O60499 249 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 CUTAO60888 179 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 HOXB7P09629 217 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 IFIT2P09913 472 aaKnown RBP9.67□□□□□ -0.86
CSMD1-213ENST00000523488 EP400NLQ6ZTU2 488 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 DNAAF4Q8WXU2 420 aa9.67□□□□□ -0.86
CSMD1-213ENST00000523488 TARSL2A2RTX5 802 aaKnown RBP9.66□□□□□ -0.86
CSMD1-213ENST00000523488 PRR29P0C7W0 189 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 PTH1RQ03431 593 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 SLC4A10Q6U841 1118 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 APTXQ7Z2E3 356 aaKnown RBP9.66□□□□□ -0.86
CSMD1-213ENST00000523488 ARHGEF25Q86VW2 580 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 IGSF1Q8N6C5 1336 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 RGPD2P0DJD1 1756 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 SFPQP23246 707 aaKnown RBP eCLIP9.66□□□□□ -0.86
CSMD1-213ENST00000523488 TNFRSF8P28908 595 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 MNAT1P51948 309 aa9.66□□□□□ -0.86
CSMD1-213ENST00000523488 NLRP12P59046 1061 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms