RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 FKBP5Q13451 457 aaPredicted RBP29.04■■■□□ 2.24
PVT1-218ENST00000523328 HTTP42858 3142 aa29.03■■■□□ 2.24
PVT1-218ENST00000523328 ANKRD18BA2A2Z9 1011 aa29.03■■■□□ 2.24
PVT1-218ENST00000523328 TAF5LO75529 589 aa29.03■■■□□ 2.24
PVT1-218ENST00000523328 CCDC184Q52MB2 194 aa29.03■■■□□ 2.24
PVT1-218ENST00000523328 IL16Q14005 1332 aa29.02■■■□□ 2.24
PVT1-218ENST00000523328 MANSC4A6NHS7 340 aaPredicted RBP29.02■■■□□ 2.24
PVT1-218ENST00000523328 INHBEP58166 350 aa29.02■■■□□ 2.24
PVT1-218ENST00000523328 IFNL1Q8IU54 200 aa29.02■■■□□ 2.24
PVT1-218ENST00000523328 HELBQ8NG08 1087 aaPredicted RBP29.02■■■□□ 2.24
PVT1-218ENST00000523328 SLC10A4Q96EP9 437 aa29.02■■■□□ 2.24
PVT1-218ENST00000523328 CLMNQ96JQ2 1002 aa29.02■■■□□ 2.24
PVT1-218ENST00000523328 PPP2R3BQ9Y5P8 575 aa29.02■■■□□ 2.24
PVT1-218ENST00000523328 ZBTB48P10074 688 aaPredicted RBP29.01■■■□□ 2.23
PVT1-218ENST00000523328 IL1R1P14778 569 aa29.01■■■□□ 2.23
PVT1-218ENST00000523328 FOXO4P98177 505 aa29■■■□□ 2.23
PVT1-218ENST00000523328 WNK4Q96J92 1243 aa29■■■□□ 2.23
PVT1-218ENST00000523328 SPDYE2BA6NHP3 402 aa28.99■■■□□ 2.23
PVT1-218ENST00000523328 PPP1R12BO60237 982 aaPredicted RBP28.99■■■□□ 2.23
PVT1-218ENST00000523328 SPDYE6P0CI01 402 aa28.99■■■□□ 2.23
PVT1-218ENST00000523328 CFAP100Q494V2 611 aa28.99■■■□□ 2.23
PVT1-218ENST00000523328 AOX1Q06278 1338 aa28.98■■■□□ 2.23
PVT1-218ENST00000523328 CLRN2A0PK11 232 aa28.98■■■□□ 2.23
PVT1-218ENST00000523328 F8W031 263 aaPredicted RBP28.98■■■□□ 2.23
PVT1-218ENST00000523328 IGF2BP3O00425 579 aaKnown RBP eCLIP28.98■■■□□ 2.23
PVT1-218ENST00000523328 FKBP1AP62942 108 aaKnown RBP28.98■■■□□ 2.23
PVT1-218ENST00000523328 IFIT5Q13325 482 aaKnown RBP28.98■■■□□ 2.23
PVT1-218ENST00000523328 PRMT6Q96LA8 375 aaPredicted RBP28.98■■■□□ 2.23
PVT1-218ENST00000523328 FANCIQ9NVI1 1328 aa28.97■■■□□ 2.23
PVT1-218ENST00000523328 UNCXA6NJT0 531 aa28.97■■■□□ 2.23
PVT1-218ENST00000523328 ZNF804AQ7Z570 1209 aa28.97■■■□□ 2.23
PVT1-218ENST00000523328 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.97■■■□□ 2.23
PVT1-218ENST00000523328 MYO1BO43795 1136 aa28.96■■■□□ 2.23
PVT1-218ENST00000523328 NBPF12Q5TAG4 269 aaPredicted RBP28.96■■■□□ 2.23
PVT1-218ENST00000523328 OTOP1Q7RTM1 612 aa28.96■■■□□ 2.23
PVT1-218ENST00000523328 TRIM17Q9Y577 477 aa28.96■■■□□ 2.23
PVT1-218ENST00000523328 OTOFQ9HC10 1997 aa28.95■■■□□ 2.23
PVT1-218ENST00000523328 VAMP4O75379 141 aa28.95■■■□□ 2.22
PVT1-218ENST00000523328 SUPT20HL1Q3ZLR7 823 aa28.95■■■□□ 2.22
PVT1-218ENST00000523328 NCBP3Q53F19 620 aaKnown RBP28.95■■■□□ 2.22
PVT1-218ENST00000523328 MKI67P46013 3256 aaKnown RBP28.95■■■□□ 2.22
PVT1-218ENST00000523328 CENPFP49454 3210 aa28.94■■■□□ 2.22
PVT1-218ENST00000523328 GJA5P36382 358 aa28.94■■■□□ 2.22
PVT1-218ENST00000523328 BEND3Q5T5X7 828 aa28.94■■■□□ 2.22
PVT1-218ENST00000523328 VEZTQ9HBM0 779 aa28.94■■■□□ 2.22
PVT1-218ENST00000523328 JAG2Q9Y219 1238 aa28.94■■■□□ 2.22
PVT1-218ENST00000523328 CHMP3Q9Y3E7 222 aa28.94■■■□□ 2.22
PVT1-218ENST00000523328 USP2O75604 605 aaPredicted RBP28.93■■■□□ 2.22
PVT1-218ENST00000523328 RBBP6Q7Z6E9 1792 aaKnown RBP28.93■■■□□ 2.22
PVT1-218ENST00000523328 F6X3S4 739 aa28.92■■■□□ 2.22
PVT1-218ENST00000523328 EPHA10Q5JZY3 1008 aa28.92■■■□□ 2.22
PVT1-218ENST00000523328 LMBR1LQ6UX01 489 aa28.92■■■□□ 2.22
PVT1-218ENST00000523328 KIAA0100Q14667 2235 aaKnown RBP28.92■■■□□ 2.22
PVT1-218ENST00000523328 IREB2P48200 963 aaKnown RBP28.91■■■□□ 2.22
PVT1-218ENST00000523328 RASA3Q14644 834 aa28.91■■■□□ 2.22
PVT1-218ENST00000523328 ZNF594Q96JF6 807 aaPredicted RBP28.91■■■□□ 2.22
PVT1-218ENST00000523328 CRHR2Q13324 411 aa28.9■■■□□ 2.22
PVT1-218ENST00000523328 ARAP2Q8WZ64 1704 aa28.9■■■□□ 2.22
PVT1-218ENST00000523328 FAM205AQ6ZU69 1335 aa28.9■■■□□ 2.22
PVT1-218ENST00000523328 POTEFA5A3E0 1075 aa28.89■■■□□ 2.22
PVT1-218ENST00000523328 RBM5P52756 815 aaKnown RBP eCLIP28.89■■■□□ 2.22
PVT1-218ENST00000523328 INTS3Q68E01 1043 aaKnown RBP28.89■■■□□ 2.22
PVT1-218ENST00000523328 LDHAL6AQ6ZMR3 332 aa28.89■■■□□ 2.22
PVT1-218ENST00000523328 ANKRD13AQ8IZ07 590 aa28.89■■■□□ 2.22
PVT1-218ENST00000523328 PTPN18Q99952 460 aa28.89■■■□□ 2.22
PVT1-218ENST00000523328 TESPA1A2RU30 521 aaPredicted RBP28.88■■■□□ 2.21
PVT1-218ENST00000523328 PLIN1O60240 522 aa28.88■■■□□ 2.21
PVT1-218ENST00000523328 EXOSC9Q06265 439 aaKnown RBP28.88■■■□□ 2.21
PVT1-218ENST00000523328 CCDC57Q2TAC2 916 aa28.88■■■□□ 2.21
PVT1-218ENST00000523328 ERO1AQ96HE7 468 aa28.88■■■□□ 2.21
PVT1-218ENST00000523328 PTPN22Q9Y2R2 807 aa28.88■■■□□ 2.21
PVT1-218ENST00000523328 OTUD7BQ6GQQ9 843 aa28.87■■■□□ 2.21
PVT1-218ENST00000523328 TDRD7Q8NHU6 1098 aaKnown RBP28.87■■■□□ 2.21
PVT1-218ENST00000523328 CD99L2Q8TCZ2 262 aa28.87■■■□□ 2.21
PVT1-218ENST00000523328 BRCA2P51587 3418 aa28.86■■■□□ 2.21
PVT1-218ENST00000523328 GRM8O00222 908 aa28.86■■■□□ 2.21
PVT1-218ENST00000523328 SPDYE2Q495Y8 402 aa28.86■■■□□ 2.21
PVT1-218ENST00000523328 CNNM1Q9NRU3 951 aa28.86■■■□□ 2.21
PVT1-218ENST00000523328 ZNF70Q9UC06 446 aaPredicted RBP28.86■■■□□ 2.21
PVT1-218ENST00000523328 CAP1Q01518 475 aa28.85■■■□□ 2.21
PVT1-218ENST00000523328 TNFAIP1Q13829 316 aa28.85■■■□□ 2.21
PVT1-218ENST00000523328 TAF7LQ5H9L4 462 aa28.85■■■□□ 2.21
PVT1-218ENST00000523328 MFSD14BQ5SR56 506 aa28.85■■■□□ 2.21
PVT1-218ENST00000523328 WDR63Q8IWG1 891 aa28.85■■■□□ 2.21
PVT1-218ENST00000523328 SERPINA10Q9UK55 444 aa28.85■■■□□ 2.21
PVT1-218ENST00000523328 MS4A4AQ96JQ5 239 aa28.84■■■□□ 2.21
PVT1-218ENST00000523328 TEPSINQ96N21 525 aa28.84■■■□□ 2.21
PVT1-218ENST00000523328 TDRD3Q9H7E2 651 aaKnown RBP28.84■■■□□ 2.21
PVT1-218ENST00000523328 TTF2Q9UNY4 1162 aaKnown RBP28.84■■■□□ 2.21
PVT1-218ENST00000523328 SP3Q02447 781 aa28.83■■■□□ 2.21
PVT1-218ENST00000523328 UBE4AQ14139 1066 aa28.83■■■□□ 2.21
PVT1-218ENST00000523328 CDAN1Q8IWY9 1227 aa28.83■■■□□ 2.21
PVT1-218ENST00000523328 OPTNQ96CV9 577 aa28.83■■■□□ 2.21
PVT1-218ENST00000523328 ELP3Q9H9T3 547 aa28.83■■■□□ 2.21
PVT1-218ENST00000523328 GYG1P46976 350 aa28.82■■■□□ 2.2
PVT1-218ENST00000523328 ARMC5Q96C12 935 aa28.82■■■□□ 2.2
PVT1-218ENST00000523328 GCC1Q96CN9 775 aa28.82■■■□□ 2.2
PVT1-218ENST00000523328 FAM84BQ96KN1 310 aaPredicted RBP28.82■■■□□ 2.2
PVT1-218ENST00000523328 EFCC1Q9HA90 598 aa28.82■■■□□ 2.2
PVT1-218ENST00000523328 HIBADHP31937 336 aaKnown RBP28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms