RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 GDPD2Q9HCC8 539 aa12.26□□□□□ -0.45
ERGIC1-211ENST00000523215 PHKG2P15735 406 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 FMR1NBQ8N0W7 255 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 FAM227BQ96M60 508 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 BCL2L12Q9HB09 334 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 GEMIN8Q9NWZ8 242 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 TUBE1Q9UJT0 475 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 DDX41Q9UJV9 622 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 H2AFXP16104 143 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 SLC39A6Q13433 755 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 ZSCAN25Q6NSZ9 544 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 KRT28Q7Z3Y7 464 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 NSUN7Q8NE18 718 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 RTEL1Q9NZ71 1219 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 RTL9Q8NET4 1388 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 CCDC192P0DO97 292 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 NMIQ13287 307 aaPredicted RBP12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 ZMYM1Q5SVZ6 1142 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 KLHDC4Q8TBB5 520 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 DDX17Q92841 729 aaKnown RBP12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 RPS6KL1Q9Y6S9 549 aa12.25□□□□□ -0.45
ERGIC1-211ENST00000523215 CBX8Q9HC52 389 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 COL4A1P02462 1669 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 DNM1Q05193 864 aaKnown RBP12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 ARID5BQ14865 1188 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 NBPF9Q3BBW0 867 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 SPATA20Q8TB22 786 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 CYP27B1O15528 508 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 GABPB1Q06547 395 aaPredicted RBP12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 NCAPHQ15003 741 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 STOX1Q6ZVD7 989 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 FCHSD1Q86WN1 690 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 POLR3EQ9NVU0 708 aa12.24□□□□□ -0.45
ERGIC1-211ENST00000523215 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 CHGBP05060 677 aa12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 LIG1P18858 919 aa12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 RCAN1P53805 252 aa12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 ZNF589Q86UQ0 364 aaPredicted RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 IKBKBO14920 756 aa12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 TBX2Q13207 712 aaPredicted RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 CT47A1Q5JQC4 288 aaPredicted RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 PROSER2Q86WR7 435 aaPredicted RBP12.23□□□□□ -0.45
ERGIC1-211ENST00000523215 TAF1LQ8IZX4 1826 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 KRT85P78386 507 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 TMEM139Q8IV31 216 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 ZNF496Q96IT1 587 aaPredicted RBP12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 DBNLQ9UJU6 430 aaKnown RBP12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 STK36Q9NRP7 1315 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 RGPD3A6NKT7 1758 aaPredicted RBP12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 RGPD4Q7Z3J3 1758 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 HCLS1P14317 486 aaPredicted RBP12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 MAP3K11Q16584 847 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 TNNI3KQ59H18 835 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 PDCL2Q8N4E4 241 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 NFATC2IPQ8NCF5 419 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 FPGT-TNNI3KV9GXZ4 949 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 CDHR2Q9BYE9 1310 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 USP16Q9Y5T5 823 aa12.22□□□□□ -0.45
ERGIC1-211ENST00000523215 MYBPC2Q14324 1141 aa12.21□□□□□ -0.45
ERGIC1-211ENST00000523215 AACSQ86V21 672 aa12.21□□□□□ -0.45
ERGIC1-211ENST00000523215 LRRC8AQ8IWT6 810 aa12.21□□□□□ -0.45
ERGIC1-211ENST00000523215 CCDC88AQ3V6T2 1871 aa12.21□□□□□ -0.45
ERGIC1-211ENST00000523215 FDPSP14324 419 aaKnown RBP12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 PRPF40BQ6NWY9 871 aaKnown RBP12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 CLASRPQ8N2M8 674 aaKnown RBP12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 KBTBD3Q8NAB2 608 aa12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 GPATCH3Q96I76 525 aa12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 SMC3Q9UQE7 1217 aa12.21□□□□□ -0.46
ERGIC1-211ENST00000523215 ZRANB2O95218 330 aaKnown RBP eCLIP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 DIAPH3Q9NSV4 1193 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 R3HCC1Q9Y3T6 440 aaKnown RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 YEATS4O95619 227 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 ATP2B3Q16720 1220 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 GOLPH3LQ9H4A5 285 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 OGFRQ9NZT2 677 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 HPS5Q9UPZ3 1129 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 CSF1RP07333 972 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 CYP21A2P08686 494 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 PIP4K2AP48426 406 aaPredicted RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 MDM2Q00987 491 aaPredicted RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 SCRN1Q12765 414 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 NBPF10Q6P3W6 841 aaKnown RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 LARP1Q6PKG0 1096 aaKnown RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 XAGE3Q8WTP9 111 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 ARHGEF1Q92888 912 aaKnown RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 EDC3Q96F86 508 aaKnown RBP12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 C19orf44Q9H6X5 657 aa12.2□□□□□ -0.46
ERGIC1-211ENST00000523215 ATP8B1O43520 1251 aa12.19□□□□□ -0.46
ERGIC1-211ENST00000523215 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
ERGIC1-211ENST00000523215 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
ERGIC1-211ENST00000523215 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
ERGIC1-211ENST00000523215 RGL2O15211 777 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms