RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 TNMDQ9H2S6 317 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 MRVI1Q9Y6F6 885 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ROBO1Q9Y6N7 1651 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PDE8BO95263 885 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 FDPSP14324 419 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ADD2P35612 726 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ANTXR2P58335 489 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ZNF34Q8IZ26 560 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ZNF830Q96NB3 372 aaPredicted RBP12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 WNK3Q9BYP7 1800 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 A0A0G2JS52 829 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 ERVV-1B6SEH8 477 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 PRC1O43663 620 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 FBXL16Q8N461 479 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 NKX2-3Q8TAU0 364 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 CLSTN2Q9H4D0 955 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 DDX19AQ9NUU7 478 aaKnown RBP12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 DENND2AQ9ULE3 1009 aa12.65□□□□□ -0.38
RAB11FIP1-204ENST00000522774 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 EVCP57679 992 aa12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SLC9C2Q5TAH2 1124 aa12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CCDC102BQ68D86 513 aa12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 NBPF3Q9H094 633 aa12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CARMIL3Q8ND23 1372 aa12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SNAP23O00161 211 aa12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ILDR1Q86SU0 546 aaPredicted RBP12.64□□□□□ -0.39
RAB11FIP1-204ENST00000522774 IDH1O75874 414 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 RBM43Q6ZSC3 357 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ACSBG1Q96GR2 724 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ZNF512BQ96KM6 892 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 USP28Q96RU2 1077 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CFAP45Q9UL16 551 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 HPS5Q9UPZ3 1129 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 KLF18A0A0U1RQI7 1052 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ZNF213O14771 459 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SUSD4Q5VX71 490 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 OTUD7BQ6GQQ9 843 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 INTS5Q6P9B9 1019 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 FAM200AQ8TCP9 573 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 WWC3Q9ULE0 1092 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 LRP5O75197 1615 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 DDX60Q8IY21 1712 aaKnown RBP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 NCOA7Q8NI08 942 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 TTC12Q9H892 705 aaPredicted RBP12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 KIF3AQ9Y496 699 aa12.63□□□□□ -0.39
RAB11FIP1-204ENST00000522774 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 GOLGA8BA8MQT2 603 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 FGFR2P21802 821 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ARID4AP29374 1257 aaPredicted RBP12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ANO6Q4KMQ2 910 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 LUZP1Q86V48 1076 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 RCOR1Q9UKL0 485 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ATRNO75882 1429 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ZNF532Q9HCE3 1301 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ADAMTS2O95450 1211 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 TBC1D10CQ8IV04 446 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SEC31BQ9NQW1 1179 aa12.62□□□□□ -0.39
RAB11FIP1-204ENST00000522774 PDE6AP16499 860 aa12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 PUM3Q15397 648 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 RALYLQ86SE5 291 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 GOLPH3LQ9H4A5 285 aa12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 AHDC1Q5TGY3 1603 aaPredicted RBP12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 TCRBV5S4A2TA0A5A2 114 aa12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CRKLP46109 303 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 LPIN2Q92539 896 aa12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CBX8Q9HC52 389 aa12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CCDC87Q9NVE4 849 aa12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 R3HCC1Q9Y3T6 440 aaKnown RBP12.61□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 UBE3CQ15386 1083 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 GJB4Q9NTQ9 266 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 APPP05067 770 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 KIAA2012Q0VF49 1180 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ITPK1Q13572 414 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 DDB1Q16531 1140 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CYB5R4Q7L1T6 521 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SPATA31A1Q5TZJ5 1347 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 MROH5Q6ZUA9 1318 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 MYH14Q7Z406 1995 aaKnown RBP12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 UQCRFS1P1P0C7P4 283 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 MARCH10Q8NA82 808 aaPredicted RBP12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ARAP2Q8WZ64 1704 aa12.6□□□□□ -0.39
RAB11FIP1-204ENST00000522774 CAMTA2O94983 1202 aa12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 RASGRF1Q13972 1273 aa12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 C17orf53Q8N3J3 647 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ZNF396Q96N95 335 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 DNAJC25Q9H1X3 360 aa12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ORC3Q9UBD5 711 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 LOC102724428A0A0B4J2F2 783 aa12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SIK1P57059 783 aa12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 SPC24Q8NBT2 197 aa12.59□□□□□ -0.39
RAB11FIP1-204ENST00000522774 UTP14AQ9BVJ6 771 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms