RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	POLR3G	O15318	223 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	SKIDA1	Q1XH10	827 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	CWC27	Q6UX04	472 aa	Known RBP	11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	COPS6	Q7L5N1	327 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	SMTN	P53814	917 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	SMC1A	Q14683	1233 aa	Known RBP	11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	ABCC1	P33527	1531 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	CABLES1	Q8TDN4	633 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	TSR2	Q969E8	191 aa	Known RBP	11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	VAT1L	Q9HCJ6	419 aa		11.74	□□□□□ -0.53
TCF7-223	ENST00000522653	LINS1	Q8NG48	757 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	LZTS2	Q9BRK4	669 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	SHTN1	A0MZ66	631 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	GOLIM4	O00461	696 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	TEKT1	Q969V4	418 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	CCDC40	Q4G0X9	1142 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	BOLA2	Q9H3K6	86 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	ARHGEF12	Q9NZN5	1544 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	PBRM1	Q86U86	1689 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	GOLGA6L7	A0A1B0GV03	622 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	SNX21	Q969T3	373 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	PIM2	Q9P1W9	311 aa		11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	PRPF31	Q8WWY3	499 aa	Known RBP	11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.73	□□□□□ -0.53
TCF7-223	ENST00000522653	NAPA	P54920	295 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	PLBD2	Q8NHP8	589 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	JCAD	Q9P266	1359 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	RNMT	O43148	476 aa	Known RBP	11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	SFPQ	P23246	707 aa	Known RBP eCLIP	11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	C1orf115	Q9H7X2	142 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	CLIP2	Q9UDT6	1046 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	SBNO1	A3KN83	1393 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	ERBB4	Q15303	1308 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	ZSCAN12	O43309	604 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	UTP14C	Q5TAP6	766 aa	Known RBP	11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	RETREG2	Q8NC44	543 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	MCM9	Q9NXL9	1143 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	LRFN2	Q9ULH4	789 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	PARP1	P09874	1014 aa	Known RBP	11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	LMAN1	P49257	510 aa		11.72	□□□□□ -0.53
TCF7-223	ENST00000522653	BLM	P54132	1417 aa	Predicted RBP	11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	GRM8	O00222	908 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	CNGA1	P29973	690 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	STK3	Q13188	491 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	TTLL5	Q6EMB2	1281 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	HS2ST1	Q7LGA3	356 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	JPH2	Q9BR39	696 aa	Predicted RBP	11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	NACA2	Q9H009	215 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	PUF60	Q9UHX1	559 aa	Known RBP	11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	MROH5	Q6ZUA9	1318 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653		H0YCG3	227 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	IVL	P07476	585 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	CEP135	Q66GS9	1140 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	UPF3B	Q9BZI7	483 aa	Known RBP	11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	TMEM94	Q12767	1356 aa		11.71	□□□□□ -0.53
TCF7-223	ENST00000522653	USO1	O60763	962 aa	Known RBP	11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	PRIM1	P49642	420 aa	Known RBP	11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	METAP2	P50579	478 aa	Known RBP eCLIP	11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	PUM3	Q15397	648 aa	Known RBP	11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	IL1RAPL2	Q9NP60	686 aa		11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	TPCN1	Q9ULQ1	816 aa		11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	FAM13A	O94988	1023 aa		11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	PPP1R2	P41236	205 aa		11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	KIF11	P52732	1056 aa		11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	GABPB1	Q06547	395 aa	Predicted RBP	11.71	□□□□□ -0.54
TCF7-223	ENST00000522653	CTAGE5	O15320	804 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	ECE1	P42892	770 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	STRN3	Q13033	797 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	KCTD2	Q14681	263 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	FAM177A1	Q8N128	213 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	NSMCE1	Q8WV22	266 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	RIOK3	O14730	519 aa	Known RBP	11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	YWHAE	P62258	255 aa	Known RBP	11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	SLC27A3	Q5K4L6	730 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	P4HA1	P13674	534 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	GSDMD	P57764	484 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	RAB3GAP1	Q15042	981 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	CCDC155	Q8N6L0	562 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	NOX5	Q96PH1	765 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	KCNH4	Q9UQ05	1017 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	SYCP2	Q9BX26	1530 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	XPOT	O43592	962 aa	Known RBP	11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	ATF7	P17544	494 aa	Predicted RBP	11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	HOXC9	P31274	260 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	RARS	P54136	660 aa	Known RBP	11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	ARID5A	Q03989	594 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	KRT79	Q5XKE5	535 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	GADL1	Q6ZQY3	521 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	KIAA1328	Q86T90	577 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	MYO3B	Q8WXR4	1341 aa		11.7	□□□□□ -0.54
TCF7-223	ENST00000522653	POTEB2	H3BUK9	544 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	CNPY2	Q9Y2B0	182 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	ASXL1	Q8IXJ9	1541 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	PI4KAP2	A4QPH2	592 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	IGHD	P01880	384 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	UBXN2A	P68543	259 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	BMP2KL	Q5H9B9	411 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	ABI1	Q8IZP0	508 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	PI4KAP1	Q8N8J0	262 aa		11.69	□□□□□ -0.54
TCF7-223	ENST00000522653	ARHGAP45	Q92619	1136 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms