RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 KAT14Q9H8E8 782 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 APOBRQ0VD83 1088 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 LEO1Q8WVC0 666 aaPredicted RBP15.8■□□□□ 0.12
SYNPO-205ENST00000522122 ESR2Q92731 530 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 MTMR6Q9Y217 621 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 PTPDC1A2A3K4 754 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 SLU7O95391 586 aaKnown RBP15.8■□□□□ 0.12
SYNPO-205ENST00000522122 DNA2P51530 1060 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 HSP90AA4PQ58FG1 418 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 TMEM87AQ8NBN3 555 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 ZCRB1Q8TBF4 217 aaKnown RBP15.8■□□□□ 0.12
SYNPO-205ENST00000522122 PDLIM2Q96JY6 352 aa15.8■□□□□ 0.12
SYNPO-205ENST00000522122 CCDC96Q2M329 555 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 FAM114A1Q8IWE2 563 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 NFATC2IPQ8NCF5 419 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 IP6K1Q92551 441 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 SMARCC1Q92922 1105 aaPredicted RBP15.79■□□□□ 0.12
SYNPO-205ENST00000522122 UBA5Q9GZZ9 404 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 ZSWIM6Q9HCJ5 1215 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 TMOD2Q9NZR1 351 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 FRMPD1Q5SYB0 1578 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 RNF113AO15541 343 aaKnown RBP15.79■□□□□ 0.12
SYNPO-205ENST00000522122 RNMTO43148 476 aaKnown RBP15.79■□□□□ 0.12
SYNPO-205ENST00000522122 CYP2E1P05181 493 aaPredicted RBP15.79■□□□□ 0.12
SYNPO-205ENST00000522122 AFMP43652 599 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 SPAG1Q07617 926 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 CTAGE1Q96RT6 745 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 METP08581 1390 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 ALS2CR12Q96Q35 445 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 LLPHQ9BRT6 129 aaKnown RBP15.79■□□□□ 0.12
SYNPO-205ENST00000522122 CHST3Q7LGC8 479 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 RMND1Q9NWS8 449 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 PTPRMP28827 1452 aa15.79■□□□□ 0.12
SYNPO-205ENST00000522122 ME3Q16798 604 aa15.78■□□□□ 0.12
SYNPO-205ENST00000522122 SLF2Q8IX21 1173 aa15.78■□□□□ 0.12
SYNPO-205ENST00000522122 DDX21Q9NR30 783 aaKnown RBP eCLIP15.78■□□□□ 0.12
SYNPO-205ENST00000522122 TRIM47Q96LD4 638 aa15.78■□□□□ 0.12
SYNPO-205ENST00000522122 NSFL1CQ9UNZ2 370 aaKnown RBP15.78■□□□□ 0.12
SYNPO-205ENST00000522122 TFCP2Q12800 502 aa15.78■□□□□ 0.12
SYNPO-205ENST00000522122 FAM227BQ96M60 508 aa15.78■□□□□ 0.12
SYNPO-205ENST00000522122 VIRMAQ69YN4 1812 aaKnown RBP15.78■□□□□ 0.12
SYNPO-205ENST00000522122 PPLO60437 1756 aa15.78■□□□□ 0.12
SYNPO-205ENST00000522122 BAG3O95817 575 aa15.78■□□□□ 0.12
SYNPO-205ENST00000522122 CCDC40Q4G0X9 1142 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 RRAGBQ5VZM2 374 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 WWC2Q6AWC2 1192 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 ARFGAP3Q9NP61 516 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.77■□□□□ 0.12
SYNPO-205ENST00000522122 SLC4A4Q9Y6R1 1079 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 CYP7A1P22680 504 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 FAM160A1Q05DH4 1040 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 UNC5CLQ8IV45 518 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 NAA15Q9BXJ9 866 aaKnown RBP15.77■□□□□ 0.12
SYNPO-205ENST00000522122 EIF4A1P60842 406 aaKnown RBP15.77■□□□□ 0.12
SYNPO-205ENST00000522122 EHBP1Q8NDI1 1231 aa15.77■□□□□ 0.12
SYNPO-205ENST00000522122 CRNKL1Q9BZJ0 848 aaKnown RBP15.77■□□□□ 0.12
SYNPO-205ENST00000522122 KDRP35968 1356 aa15.77■□□□□ 0.11
SYNPO-205ENST00000522122 TMEM2Q9UHN6 1383 aa15.77■□□□□ 0.11
SYNPO-205ENST00000522122 USP6P35125 1406 aa15.77■□□□□ 0.11
SYNPO-205ENST00000522122 BRAPQ7Z569 592 aa15.77■□□□□ 0.11
SYNPO-205ENST00000522122 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.77■□□□□ 0.11
SYNPO-205ENST00000522122 SRRTQ9BXP5 876 aaKnown RBP15.77■□□□□ 0.11
SYNPO-205ENST00000522122 VAT1LQ9HCJ6 419 aa15.77■□□□□ 0.11
SYNPO-205ENST00000522122 COL3A1P02461 1466 aaPredicted RBP15.77■□□□□ 0.11
SYNPO-205ENST00000522122 SHPRHQ149N8 1683 aa15.77■□□□□ 0.11
SYNPO-205ENST00000522122 CCDC178Q5BJE1 867 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 BCL2L12Q9HB09 334 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 TRIM21P19474 475 aaKnown RBP15.76■□□□□ 0.11
SYNPO-205ENST00000522122 CETN2P41208 172 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 PTH1RQ03431 593 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 JADE2Q9NQC1 790 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 HELLSQ9NRZ9 838 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 AKR1B10O60218 316 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 IFIT1BQ5T764 474 aaKnown RBP15.76■□□□□ 0.11
SYNPO-205ENST00000522122 SPTY2D1Q68D10 685 aaPredicted RBP15.76■□□□□ 0.11
SYNPO-205ENST00000522122 STX8Q9UNK0 236 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 IGSF1Q8N6C5 1336 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 TRIM75PA6NK02 468 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 ARHGEF40Q8TER5 1519 aa15.76■□□□□ 0.11
SYNPO-205ENST00000522122 GCP02774 474 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 TNIP1Q15025 636 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 ANKRD18AQ8IVF6 992 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 SSR1P43307 286 aaKnown RBP15.75■□□□□ 0.11
SYNPO-205ENST00000522122 LMAN1P49257 510 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 HLTFQ14527 1009 aaKnown RBP eCLIP15.75■□□□□ 0.11
SYNPO-205ENST00000522122 ZDHHC9Q9Y397 364 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 ADAMTS2O95450 1211 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 BEND3Q5T5X7 828 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 ERO1AQ96HE7 468 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 TRERF1Q96PN7 1200 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 IFNKQ9P0W0 207 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 DLC1Q96QB1 1528 aa15.75■□□□□ 0.11
SYNPO-205ENST00000522122 IFFO1Q0D2I5 559 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.74■□□□□ 0.11
SYNPO-205ENST00000522122 V9GYY5 206 aaPredicted RBP15.74■□□□□ 0.11
SYNPO-205ENST00000522122 ANKRD62A6NC57 917 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 POTEJP0CG39 1038 aa15.74■□□□□ 0.11
SYNPO-205ENST00000522122 TCERG1LQ5VWI1 586 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms