RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 BOLA2Q9H3K6 86 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 KCNQ5Q9NR82 932 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 HMG20BQ9P0W2 317 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 ZNRF3Q9ULT6 936 aa29.5■■■□□ 2.31
PVT1-212ENST00000521951 ERC2O15083 957 aa29.49■■■□□ 2.31
PVT1-212ENST00000521951 RGS3P49796 1198 aa29.49■■■□□ 2.31
PVT1-212ENST00000521951 DENND2AQ9ULE3 1009 aa29.49■■■□□ 2.31
PVT1-212ENST00000521951 AOX1Q06278 1338 aa29.49■■■□□ 2.31
PVT1-212ENST00000521951 GLRX3O76003 335 aaKnown RBP29.48■■■□□ 2.31
PVT1-212ENST00000521951 PI16Q6UXB8 463 aa29.48■■■□□ 2.31
PVT1-212ENST00000521951 SNRKQ9NRH2 765 aa29.48■■■□□ 2.31
PVT1-212ENST00000521951 RNF181Q9P0P0 153 aa29.48■■■□□ 2.31
PVT1-212ENST00000521951 COL1A1P02452 1464 aaPredicted RBP29.47■■■□□ 2.31
PVT1-212ENST00000521951 C9orf131Q5VYM1 1079 aa29.47■■■□□ 2.31
PVT1-212ENST00000521951 SPATA5Q8NB90 893 aa29.47■■■□□ 2.31
PVT1-212ENST00000521951 CHAF1AQ13111 956 aaPredicted RBP29.46■■■□□ 2.31
PVT1-212ENST00000521951 NDUFB9Q9Y6M9 179 aa29.46■■■□□ 2.31
PVT1-212ENST00000521951 UTRNP46939 3433 aa29.46■■■□□ 2.31
PVT1-212ENST00000521951 GTF2IP78347 998 aa29.45■■■□□ 2.31
PVT1-212ENST00000521951 HAUS7Q99871 368 aa29.45■■■□□ 2.31
PVT1-212ENST00000521951 JAG2Q9Y219 1238 aa29.45■■■□□ 2.31
PVT1-212ENST00000521951 FZD9O00144 591 aa29.45■■■□□ 2.3
PVT1-212ENST00000521951 ZAP70P43403 619 aa29.45■■■□□ 2.3
PVT1-212ENST00000521951 PDS5AQ29RF7 1337 aaKnown RBP29.45■■■□□ 2.3
PVT1-212ENST00000521951 FAM205AQ6ZU69 1335 aa29.45■■■□□ 2.3
PVT1-212ENST00000521951 TTLL5Q6EMB2 1281 aa29.44■■■□□ 2.3
PVT1-212ENST00000521951 DNAJC2Q99543 621 aaKnown RBP29.44■■■□□ 2.3
PVT1-212ENST00000521951 PSME4Q14997 1843 aa29.43■■■□□ 2.3
PVT1-212ENST00000521951 USP17L3A6NCW0 530 aa29.43■■■□□ 2.3
PVT1-212ENST00000521951 USP17L4A6NCW7 530 aa29.43■■■□□ 2.3
PVT1-212ENST00000521951 USP17L1Q7RTZ2 530 aa29.43■■■□□ 2.3
PVT1-212ENST00000521951 FBXW7Q969H0 707 aa29.43■■■□□ 2.3
PVT1-212ENST00000521951 RAD17O75943 681 aa29.42■■■□□ 2.3
PVT1-212ENST00000521951 CXCL9Q07325 125 aa29.42■■■□□ 2.3
PVT1-212ENST00000521951 STRIP1Q5VSL9 837 aa29.42■■■□□ 2.3
PVT1-212ENST00000521951 CYP2E1P05181 493 aaPredicted RBP29.41■■■□□ 2.3
PVT1-212ENST00000521951 WDR66Q8TBY9 1149 aa29.41■■■□□ 2.3
PVT1-212ENST00000521951 ZNF646O15015 1829 aaPredicted RBP29.41■■■□□ 2.3
PVT1-212ENST00000521951 MAP4K4O95819 1239 aaPredicted RBP29.4■■■□□ 2.3
PVT1-212ENST00000521951 EIF6P56537 245 aaKnown RBP29.4■■■□□ 2.3
PVT1-212ENST00000521951 TTC22Q5TAA0 569 aa29.4■■■□□ 2.3
PVT1-212ENST00000521951 EDC3Q96F86 508 aaKnown RBP29.4■■■□□ 2.3
PVT1-212ENST00000521951 TIAM2Q8IVF5 1701 aa29.4■■■□□ 2.3
PVT1-212ENST00000521951 DACT2Q5SW24 774 aa29.4■■■□□ 2.3
PVT1-212ENST00000521951 ANTXR1Q9H6X2 564 aa29.4■■■□□ 2.3
PVT1-212ENST00000521951 PAG1Q9NWQ8 432 aa29.4■■■□□ 2.3
PVT1-212ENST00000521951 GOLIM4O00461 696 aa29.39■■■□□ 2.3
PVT1-212ENST00000521951 PSMD14O00487 310 aa29.39■■■□□ 2.3
PVT1-212ENST00000521951 CIAPIN1Q6FI81 312 aa29.39■■■□□ 2.3
PVT1-212ENST00000521951 TBC1D9Q6ZT07 1266 aa29.39■■■□□ 2.3
PVT1-212ENST00000521951 TBC1D22AQ8WUA7 517 aa29.38■■■□□ 2.29
PVT1-212ENST00000521951 MXD3Q9BW11 206 aa29.38■■■□□ 2.29
PVT1-212ENST00000521951 MYO5AQ9Y4I1 1855 aaKnown RBP29.38■■■□□ 2.29
PVT1-212ENST00000521951 ZNF541Q9H0D2 1346 aa29.37■■■□□ 2.29
PVT1-212ENST00000521951 SALL1Q9NSC2 1324 aa29.37■■■□□ 2.29
PVT1-212ENST00000521951 VIL1P09327 827 aaKnown RBP29.37■■■□□ 2.29
PVT1-212ENST00000521951 GSPT1P15170 499 aaKnown RBP29.37■■■□□ 2.29
PVT1-212ENST00000521951 TNIP1Q15025 636 aa29.37■■■□□ 2.29
PVT1-212ENST00000521951 MFSD14BQ5SR56 506 aa29.37■■■□□ 2.29
PVT1-212ENST00000521951 PIH1D3Q9NQM4 214 aaKnown RBP29.37■■■□□ 2.29
PVT1-212ENST00000521951 CERS5Q8N5B7 392 aa29.36■■■□□ 2.29
PVT1-212ENST00000521951 FKBP1AP62942 108 aaKnown RBP29.35■■■□□ 2.29
PVT1-212ENST00000521951 TTF1Q15361 905 aaPredicted RBP29.35■■■□□ 2.29
PVT1-212ENST00000521951 ABCF2Q9UG63 623 aa29.35■■■□□ 2.29
PVT1-212ENST00000521951 TRIM6-TRIM34B2RNG4 842 aa29.35■■■□□ 2.29
PVT1-212ENST00000521951 RSBN1LQ6PCB5 846 aaPredicted RBP29.35■■■□□ 2.29
PVT1-212ENST00000521951 GRIK5Q16478 980 aa29.34■■■□□ 2.29
PVT1-212ENST00000521951 ZGPATQ8N5A5 531 aaKnown RBP29.34■■■□□ 2.29
PVT1-212ENST00000521951 EVI5LQ96CN4 794 aa29.33■■■□□ 2.29
PVT1-212ENST00000521951 ZC3H4Q9UPT8 1303 aaKnown RBP29.32■■■□□ 2.28
PVT1-212ENST00000521951 DOCK2Q92608 1830 aa29.32■■■□□ 2.28
PVT1-212ENST00000521951 PRDX5P30044 214 aa29.32■■■□□ 2.28
PVT1-212ENST00000521951 SPTY2D1Q68D10 685 aaPredicted RBP29.32■■■□□ 2.28
PVT1-212ENST00000521951 RILPL2Q969X0 211 aa29.32■■■□□ 2.28
PVT1-212ENST00000521951 LRP2BPQ9P2M1 347 aa29.32■■■□□ 2.28
PVT1-212ENST00000521951 GJA3Q9Y6H8 435 aa29.32■■■□□ 2.28
PVT1-212ENST00000521951 ERICH6Q7L0X2 663 aa29.31■■■□□ 2.28
PVT1-212ENST00000521951 CNTROBQ8N137 903 aa29.31■■■□□ 2.28
PVT1-212ENST00000521951 KBTBD3Q8NAB2 608 aa29.31■■■□□ 2.28
PVT1-212ENST00000521951 GMLQ99445 158 aa29.31■■■□□ 2.28
PVT1-212ENST00000521951 ZBTB12Q9Y330 459 aaPredicted RBP29.31■■■□□ 2.28
PVT1-212ENST00000521951 AK9Q5TCS8 1911 aa29.31■■■□□ 2.28
PVT1-212ENST00000521951 LDHBP07195 334 aaKnown RBP29.3■■■□□ 2.28
PVT1-212ENST00000521951 SDSP20132 328 aa29.3■■■□□ 2.28
PVT1-212ENST00000521951 BMP2KLQ5H9B9 411 aa29.3■■■□□ 2.28
PVT1-212ENST00000521951 SUGT1Q9Y2Z0 365 aa29.3■■■□□ 2.28
PVT1-212ENST00000521951 MYO3BQ8WXR4 1341 aa29.3■■■□□ 2.28
PVT1-212ENST00000521951 IDH1O75874 414 aaKnown RBP29.3■■■□□ 2.28
PVT1-212ENST00000521951 GPC2Q8N158 579 aa29.3■■■□□ 2.28
PVT1-212ENST00000521951 AGBL3Q8NEM8 1001 aa29.3■■■□□ 2.28
PVT1-212ENST00000521951 RAI14Q9P0K7 980 aa29.3■■■□□ 2.28
PVT1-212ENST00000521951 KIAA0825Q8IV33 1275 aa29.28■■■□□ 2.28
PVT1-212ENST00000521951 FSD1Q9BTV5 496 aa29.28■■■□□ 2.28
PVT1-212ENST00000521951 MYH7P12883 1935 aa29.27■■■□□ 2.28
PVT1-212ENST00000521951 F8W031 263 aaPredicted RBP29.27■■■□□ 2.28
PVT1-212ENST00000521951 DDNO94850 711 aaPredicted RBP29.27■■■□□ 2.28
PVT1-212ENST00000521951 MAP3K12Q12852 859 aa29.27■■■□□ 2.28
PVT1-212ENST00000521951 RPS12P25398 132 aaKnown RBP29.26■■■□□ 2.27
PVT1-212ENST00000521951 GMPSP49915 693 aaPredicted RBP29.26■■■□□ 2.27
PVT1-212ENST00000521951 DPY19L2Q6NUT2 758 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms