RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 TRMT112Q9UI30 125 aaKnown RBP10.55□□□□□ -0.72
VPS13B-210ENST00000521932 PXDNLA1KZ92 1463 aa10.55□□□□□ -0.72
VPS13B-210ENST00000521932 KLRG2A4D1S0 409 aaPredicted RBP10.54□□□□□ -0.72
VPS13B-210ENST00000521932 MS4A1P11836 297 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 USP46P62068 366 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 MSS51Q4VC12 460 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 DZIP1LQ8IYY4 767 aaKnown RBP10.54□□□□□ -0.72
VPS13B-210ENST00000521932 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
VPS13B-210ENST00000521932 BRIP1Q9BX63 1249 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 TNNQ9UQP3 1299 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
VPS13B-210ENST00000521932 CD2APQ9Y5K6 639 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 ANKRD36CQ5JPF3 1778 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 UTYO14607 1347 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 SH3TC1Q8TE82 1336 aa10.54□□□□□ -0.72
VPS13B-210ENST00000521932 RIC1Q4ADV7 1423 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 FAM177BA6PVY3 158 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 PLIN1O60240 522 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
VPS13B-210ENST00000521932 CASP7P55210 303 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 TGFB2P61812 414 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 ST5P78524 1137 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 PDE3AQ14432 1141 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 ERFEQ4G0M1 354 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 NUTM1Q86Y26 1132 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 CLUAP1Q96AJ1 413 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 FAM89AQ96GI7 184 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 USP44Q9H0E7 712 aa10.53□□□□□ -0.72
VPS13B-210ENST00000521932 C10orf71Q711Q0 1435 aa10.52□□□□□ -0.73
VPS13B-210ENST00000521932 AFDNP55196 1824 aaKnown RBP10.52□□□□□ -0.73
VPS13B-210ENST00000521932 GRM8O00222 908 aa10.52□□□□□ -0.73
VPS13B-210ENST00000521932 RLBP1P12271 317 aa10.52□□□□□ -0.73
VPS13B-210ENST00000521932 SYNE4Q8N205 404 aa10.52□□□□□ -0.73
VPS13B-210ENST00000521932 SYMPKQ92797 1274 aaKnown RBP10.52□□□□□ -0.73
VPS13B-210ENST00000521932 PDZRN3Q9UPQ7 1066 aa10.52□□□□□ -0.73
VPS13B-210ENST00000521932 CDHR2Q9BYE9 1310 aa10.52□□□□□ -0.73
VPS13B-210ENST00000521932 LRP5O75197 1615 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 NRG2O14511 850 aaPredicted RBP10.51□□□□□ -0.73
VPS13B-210ENST00000521932 NPHP1O15259 732 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
VPS13B-210ENST00000521932 PDE6BP35913 854 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 RRP1P56182 461 aaKnown RBP10.51□□□□□ -0.73
VPS13B-210ENST00000521932 Q3C1V9 767 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 CRY2Q49AN0 593 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 ZNF598Q86UK7 904 aaKnown RBP10.51□□□□□ -0.73
VPS13B-210ENST00000521932 FTSJ3Q8IY81 847 aaKnown RBP10.51□□□□□ -0.73
VPS13B-210ENST00000521932 CCDC24Q8N4L8 307 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 TMEM57Q8N5G2 664 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 SYT17Q9BSW7 474 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 PLA2G12BQ9BX93 195 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 C9orf78Q9NZ63 289 aaPredicted RBP10.51□□□□□ -0.73
VPS13B-210ENST00000521932 PPP1R1BQ9UD71 204 aaPredicted RBP10.51□□□□□ -0.73
VPS13B-210ENST00000521932 PCDHGC3Q9UN70 934 aa10.51□□□□□ -0.73
VPS13B-210ENST00000521932 IRS4O14654 1257 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-210ENST00000521932 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-210ENST00000521932 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-210ENST00000521932 KCNA3P22001 575 aa10.5□□□□□ -0.73
VPS13B-210ENST00000521932 SF3B3Q15393 1217 aaKnown RBP10.5□□□□□ -0.73
VPS13B-210ENST00000521932 RTL5Q5HYW3 569 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-210ENST00000521932 UBE3BQ7Z3V4 1068 aa10.5□□□□□ -0.73
VPS13B-210ENST00000521932 NLRP3Q96P20 1036 aa10.5□□□□□ -0.73
VPS13B-210ENST00000521932 FHDC1Q9C0D6 1143 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-210ENST00000521932 ABCC12Q96J65 1359 aa10.5□□□□□ -0.73
VPS13B-210ENST00000521932 KIF13BQ9NQT8 1826 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 PDE8AO60658 829 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 SRGNP10124 158 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 HCLS1P14317 486 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-210ENST00000521932 MMP16P51512 607 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 PDE4DQ08499 809 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 C20orf194Q5TEA3 1177 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 ZNF697Q5TEC3 545 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 PANK1Q8TE04 598 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 JARID2Q92833 1246 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-210ENST00000521932 KAZALD1Q96I82 304 aa10.49□□□□□ -0.73
VPS13B-210ENST00000521932 USB1Q9BQ65 265 aaKnown RBP10.49□□□□□ -0.73
VPS13B-210ENST00000521932 GPBP1L1Q9HC44 474 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-210ENST00000521932 SUPT16HQ9Y5B9 1047 aaKnown RBP10.49□□□□□ -0.73
VPS13B-210ENST00000521932 N4BP2Q86UW6 1770 aaPredicted RBP10.48□□□□□ -0.73
VPS13B-210ENST00000521932 H0YIN7 160 aa10.48□□□□□ -0.73
VPS13B-210ENST00000521932 CSF1RP07333 972 aa10.48□□□□□ -0.73
VPS13B-210ENST00000521932 GNAI3P08754 354 aa10.48□□□□□ -0.73
VPS13B-210ENST00000521932 NDUFV2P19404 249 aa10.48□□□□□ -0.73
VPS13B-210ENST00000521932 HOXA10P31260 410 aaPredicted RBP10.48□□□□□ -0.73
VPS13B-210ENST00000521932 FOXO4P98177 505 aa10.48□□□□□ -0.73
VPS13B-210ENST00000521932 MVPQ14764 893 aaKnown RBP10.48□□□□□ -0.73
VPS13B-210ENST00000521932 HDAC5Q9UQL6 1122 aa10.48□□□□□ -0.73
VPS13B-210ENST00000521932 GOLGB1Q14789 3259 aaKnown RBP10.47□□□□□ -0.73
VPS13B-210ENST00000521932 A0A0G2JLW4 131 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 GDF9O60383 454 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 DXOO77932 396 aaKnown RBP10.47□□□□□ -0.73
VPS13B-210ENST00000521932 CENPBP07199 599 aaPredicted RBP10.47□□□□□ -0.73
VPS13B-210ENST00000521932 UBTFL1P0CB47 393 aaPredicted RBP10.47□□□□□ -0.73
VPS13B-210ENST00000521932 DPEP1P16444 411 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 ITPRIPQ8IWB1 547 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 TTLL11Q8NHH1 800 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 MASTLQ96GX5 879 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 SUCLG2Q96I99 432 aa10.47□□□□□ -0.73
VPS13B-210ENST00000521932 MEIS3Q99687 375 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms