RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ERVV-1B6SEH8 477 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 SGPL1O95470 568 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 ARHGEF6Q15052 776 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 OTUD7BQ6GQQ9 843 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 TTLL7Q6ZT98 887 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 C7orf61Q8IZ16 206 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 AGBL3Q8NEM8 1001 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 NECTIN2Q92692 538 aa9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 SIPA1L3O60292 1781 aaPredicted RBP9.82□□□□□ -0.84
CTNNA1-227ENST00000521387 HMOX1P09601 288 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 USP17L8P0C7I0 530 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 NF2P35240 595 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 LACTBP83111 547 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 GRAPQ13588 217 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 USP38Q8NB14 1042 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 GRAPLQ8TC17 118 aaPredicted RBP9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 BRI3BPQ8WY22 251 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 UBE2OQ9C0C9 1292 aaKnown RBP9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 UNC93B1Q9H1C4 597 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 MAP3K15Q6ZN16 1313 aa9.81□□□□□ -0.84
CTNNA1-227ENST00000521387 NUP98P52948 1817 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 WNT10BO00744 389 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 SLC24A1O60721 1099 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 GRK4P32298 578 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 GPSM2P81274 684 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 TEFQ10587 303 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 PDCD7Q8N8D1 485 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 DIS3LQ8TF46 1054 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 MYLIPQ8WY64 445 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 PAWRQ96IZ0 340 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 SEMA6BQ9H3T3 888 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 NSFL1CQ9UNZ2 370 aaKnown RBP9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 RIPOR2Q9Y4F9 1068 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 COL4A1P02462 1669 aa9.8□□□□□ -0.84
CTNNA1-227ENST00000521387 LRRC37AA6NMS7 1700 aa9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 SNRPA1P09661 255 aaKnown RBP9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 PRMT2P55345 433 aa9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 TAF1CQ15572 869 aaPredicted RBP9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 NGEFQ8N5V2 710 aa9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 ZFYVE28Q9HCC9 887 aa9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 SRRDQ9UH36 339 aa9.79□□□□□ -0.84
CTNNA1-227ENST00000521387 BTBD11A6QL63 1104 aa9.78□□□□□ -0.84
CTNNA1-227ENST00000521387 C6orf229H3BNL8 230 aa9.78□□□□□ -0.84
CTNNA1-227ENST00000521387 CENPBP07199 599 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-227ENST00000521387 HCLS1P14317 486 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-227ENST00000521387 TBC1D16Q8TBP0 767 aa9.78□□□□□ -0.84
CTNNA1-227ENST00000521387 TRIM47Q96LD4 638 aa9.78□□□□□ -0.84
CTNNA1-227ENST00000521387 TTYH1Q9H313 450 aaPredicted RBP9.78□□□□□ -0.84
CTNNA1-227ENST00000521387 CEMIPQ8WUJ3 1361 aa9.77□□□□□ -0.84
CTNNA1-227ENST00000521387 GNRH1P01148 92 aa9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 OSBPP22059 807 aa9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 DCAF8Q5TAQ9 597 aa9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 ZNF697Q5TEC3 545 aa9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 MXD3Q9BW11 206 aa9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 CRISPLD2Q9H0B8 497 aa9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 ZBTB3Q9H5J0 574 aa9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 ZBTB47Q9UFB7 747 aaPredicted RBP9.77□□□□□ -0.85
CTNNA1-227ENST00000521387 LAMB2P55268 1798 aa9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 TLR2O60603 784 aa9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 USP2O75604 605 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 SASH1O94885 1247 aa9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 TFRCP02786 760 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 DDX46Q7L014 1031 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 ZBED3Q96IU2 234 aaPredicted RBP9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 YTHDC1Q96MU7 727 aaKnown RBP9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 LRFN3Q9BTN0 628 aa9.76□□□□□ -0.85
CTNNA1-227ENST00000521387 UNCXA6NJT0 531 aa9.75□□□□□ -0.85
CTNNA1-227ENST00000521387 GNAT3A8MTJ3 354 aa9.75□□□□□ -0.85
CTNNA1-227ENST00000521387 DDX10Q13206 875 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-227ENST00000521387 PPP1R42Q7Z4L9 355 aa9.75□□□□□ -0.85
CTNNA1-227ENST00000521387 DEFB118Q96PH6 123 aa9.75□□□□□ -0.85
CTNNA1-227ENST00000521387 UTP14AQ9BVJ6 771 aaKnown RBP9.75□□□□□ -0.85
CTNNA1-227ENST00000521387 ANKRD36CQ5JPF3 1778 aa9.75□□□□□ -0.85
CTNNA1-227ENST00000521387 DDX60Q8IY21 1712 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 PSMC4P43686 418 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 C17orf99Q6UX52 265 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 GIGYF2Q6Y7W6 1299 aaKnown RBP9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 TMC4Q7Z404 712 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 NECAB2Q7Z6G3 386 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 RAET1EQ8TD07 263 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 ADAMTS19Q8TE59 1207 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 EYA3Q99504 573 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 DEFB129Q9H1M3 183 aa9.74□□□□□ -0.85
CTNNA1-227ENST00000521387 COL3A1P02461 1466 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 CCL15-CCL14A0A0B4J2E2 113 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 FOSL2P15408 326 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 UBXN2AP68543 259 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 MDM2Q00987 491 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 KIF22Q14807 665 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 CCL15Q16663 113 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 PARP10Q53GL7 1025 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 OPTNQ96CV9 577 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 P2RX7Q99572 595 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 C1QTNF1Q9BXJ1 281 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 ZC3H12CQ9C0D7 883 aaKnown RBP9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 ELP3Q9H9T3 547 aa9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 PAK6Q9NQU5 681 aaPredicted RBP9.73□□□□□ -0.85
CTNNA1-227ENST00000521387 BIN2Q9UBW5 565 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms