RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 HSPA6P17066 643 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 ALAS2P22557 587 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 PRELPP51888 382 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 EPHA4P54764 986 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 SFSWAPQ12872 951 aaKnown RBP6.16□□□□□ -1.42
VPS13B-208ENST00000521037 PRSS36Q5K4E3 855 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 ZNF417Q8TAU3 575 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 ZNF587Q96SQ5 575 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-208ENST00000521037 KRTAP9-9Q9BYP9 154 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 KRTAP9-4Q9BYQ2 154 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 ZFP64Q9NPA5 681 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 KANK1Q14678 1352 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 CRYBG1Q9Y4K1 1723 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 SPDYE3A6NKU9 549 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 ZBTB7AO95365 584 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 ALBP02768 609 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 TEAD4Q15561 434 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 GRIK4Q16099 956 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 PRRT3Q5FWE3 981 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 KANK4Q5T7N3 995 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-208ENST00000521037 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 CABP1Q9NZU7 370 aa6.15□□□□□ -1.42
VPS13B-208ENST00000521037 PPP1R1BQ9UD71 204 aaPredicted RBP6.15□□□□□ -1.42
VPS13B-208ENST00000521037 ADCY9O60503 1353 aa6.15□□□□□ -1.43
VPS13B-208ENST00000521037 TNS3Q68CZ2 1445 aa6.15□□□□□ -1.43
VPS13B-208ENST00000521037 RGPD3A6NKT7 1758 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-208ENST00000521037 RGPD4Q7Z3J3 1758 aa6.14□□□□□ -1.43
VPS13B-208ENST00000521037 L3MBTL2Q969R5 705 aa6.14□□□□□ -1.43
VPS13B-208ENST00000521037 DLC1Q96QB1 1528 aa6.14□□□□□ -1.43
VPS13B-208ENST00000521037 COL24A1Q17RW2 1714 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 H2AFB1P0C5Y9 115 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 H2AFB2P0C5Z0 115 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 SELPP16109 830 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 NOS2P35228 1153 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 ADGRE1Q14246 886 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 LRRC69Q6ZNQ3 347 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 FAM196AQ6ZSG2 479 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 BTG4Q9NY30 223 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 SPATA31A1Q5TZJ5 1347 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 HFM1A2PYH4 1435 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 NAIPQ13075 1403 aa6.13□□□□□ -1.43
VPS13B-208ENST00000521037 RRBP1Q9P2E9 1410 aaKnown RBP6.13□□□□□ -1.43
VPS13B-208ENST00000521037 TRPM3Q9HCF6 1732 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-208ENST00000521037 CCDC144AA2RUR9 1427 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 SBNO1A3KN83 1393 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 PIK3CDO00329 1044 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 KCNQ4P56696 695 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 COL14A1Q05707 1796 aaKnown RBP6.12□□□□□ -1.43
VPS13B-208ENST00000521037 TRIM28Q13263 835 aaKnown RBP6.12□□□□□ -1.43
VPS13B-208ENST00000521037 BICDL1Q6ZP65 573 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 KRT28Q7Z3Y7 464 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 ZNF358Q9NW07 568 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 FMN2Q9NZ56 1722 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 PHRF1Q9P1Y6 1649 aaKnown RBP6.12□□□□□ -1.43
VPS13B-208ENST00000521037 PLEKHH1Q9ULM0 1364 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 GPC6Q9Y625 555 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-208ENST00000521037 GJA3Q9Y6H8 435 aa6.12□□□□□ -1.43
VPS13B-208ENST00000521037 KIF1AQ12756 1690 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 PAPPAQ13219 1627 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 TECPR2O15040 1411 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 ATP10DQ9P241 1426 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 SCO2A0A1W2PP80 73 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 PLSCR1O15162 318 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 YBX3P16989 372 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS13B-208ENST00000521037 MBTPS1Q14703 1052 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 SH3PXD2AQ5TCZ1 1133 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS13B-208ENST00000521037 NACC1Q96RE7 527 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 SSBP4Q9BWG4 385 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-208ENST00000521037 GDPD2Q9HCC8 539 aa6.11□□□□□ -1.43
VPS13B-208ENST00000521037 ALS2Q96Q42 1657 aa6.1□□□□□ -1.43
VPS13B-208ENST00000521037 TNRC18O15417 2968 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-208ENST00000521037 NRXN1Q9ULB1 1477 aa6.1□□□□□ -1.43
VPS13B-208ENST00000521037 BACH1O14867 736 aa6.1□□□□□ -1.43
VPS13B-208ENST00000521037 HYAL3O43820 417 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-208ENST00000521037 ADH7P40394 386 aa6.1□□□□□ -1.43
VPS13B-208ENST00000521037 SPEM2Q0P670 501 aa6.1□□□□□ -1.43
VPS13B-208ENST00000521037 NBPF8Q3BBV2 869 aa6.1□□□□□ -1.43
VPS13B-208ENST00000521037 JMYQ8N9B5 988 aa6.1□□□□□ -1.43
VPS13B-208ENST00000521037 CCDC9Q9Y3X0 531 aaKnown RBP6.1□□□□□ -1.43
VPS13B-208ENST00000521037 ANKRD50Q9ULJ7 1429 aa6.09□□□□□ -1.43
VPS13B-208ENST00000521037 C9orf172C9J069 976 aa6.09□□□□□ -1.43
VPS13B-208ENST00000521037 LRP8Q14114 963 aa6.09□□□□□ -1.43
VPS13B-208ENST00000521037 WASHC4Q2M389 1173 aa6.09□□□□□ -1.43
VPS13B-208ENST00000521037 TNS4Q8IZW8 715 aa6.09□□□□□ -1.43
VPS13B-208ENST00000521037 LENG1Q96BZ8 264 aaPredicted RBP6.09□□□□□ -1.43
VPS13B-208ENST00000521037 LRPPRCP42704 1394 aaKnown RBP6.08□□□□□ -1.44
VPS13B-208ENST00000521037 ANKRD30AQ9BXX3 1397 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 CLTCL1P53675 1640 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 A0A0A0MRY4 1105 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 ZBTB7BO15156 539 aaPredicted RBP6.08□□□□□ -1.44
VPS13B-208ENST00000521037 SOX11P35716 441 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 WAPLQ7Z5K2 1190 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 NLGN2Q8NFZ4 835 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 PRM3Q9NNZ6 103 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 SBF2Q86WG5 1849 aa6.08□□□□□ -1.44
VPS13B-208ENST00000521037 LZTS3O60299 673 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-208ENST00000521037 ELNP15502 786 aa6.07□□□□□ -1.44
VPS13B-208ENST00000521037 HIRAP54198 1017 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms