RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 MYH13Q9UKX3 1938 aa18.22■□□□□ 0.51
SREK1-209ENST00000520953 GNL3LQ9NVN8 582 aaKnown RBP18.21■□□□□ 0.51
SREK1-209ENST00000520953 FRAT2O75474 233 aaPredicted RBP18.21■□□□□ 0.51
SREK1-209ENST00000520953 IDH1O75874 414 aaKnown RBP18.21■□□□□ 0.51
SREK1-209ENST00000520953 FHDC1Q9C0D6 1143 aaPredicted RBP18.21■□□□□ 0.51
SREK1-209ENST00000520953 TMX4Q9H1E5 349 aaPredicted RBP18.21■□□□□ 0.51
SREK1-209ENST00000520953 CD209Q9NNX6 404 aa18.21■□□□□ 0.51
SREK1-209ENST00000520953 CCDC129Q6ZRS4 1044 aa18.2■□□□□ 0.5
SREK1-209ENST00000520953 TDRD7Q8NHU6 1098 aaKnown RBP18.2■□□□□ 0.5
SREK1-209ENST00000520953 GRIK5Q16478 980 aa18.2■□□□□ 0.5
SREK1-209ENST00000520953 DALRD3Q5D0E6 543 aaKnown RBP18.2■□□□□ 0.5
SREK1-209ENST00000520953 CASC1Q6TDU7 716 aa18.2■□□□□ 0.5
SREK1-209ENST00000520953 ZNF804AQ7Z570 1209 aa18.2■□□□□ 0.5
SREK1-209ENST00000520953 ZNF589Q86UQ0 364 aaPredicted RBP18.2■□□□□ 0.5
SREK1-209ENST00000520953 DDRGK1Q96HY6 314 aa18.2■□□□□ 0.5
SREK1-209ENST00000520953 SGSM2O43147 1006 aa18.19■□□□□ 0.5
SREK1-209ENST00000520953 DBNDD1Q9H9R9 158 aa18.19■□□□□ 0.5
SREK1-209ENST00000520953 KCNQ5Q9NR82 932 aa18.19■□□□□ 0.5
SREK1-209ENST00000520953 ABCF2Q9UG63 623 aa18.19■□□□□ 0.5
SREK1-209ENST00000520953 BCS1LQ9Y276 419 aa18.19■□□□□ 0.5
SREK1-209ENST00000520953 DOCK2Q92608 1830 aa18.19■□□□□ 0.5
SREK1-209ENST00000520953 AOC3Q16853 763 aa18.18■□□□□ 0.5
SREK1-209ENST00000520953 RTFDC1Q9BY42 306 aaPredicted RBP18.18■□□□□ 0.5
SREK1-209ENST00000520953 ZC3H12CQ9C0D7 883 aaKnown RBP18.18■□□□□ 0.5
SREK1-209ENST00000520953 DENND2AQ9ULE3 1009 aa18.18■□□□□ 0.5
SREK1-209ENST00000520953 MYH7P12883 1935 aa18.18■□□□□ 0.5
SREK1-209ENST00000520953 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
SREK1-209ENST00000520953 RNF113AO15541 343 aaKnown RBP18.17■□□□□ 0.5
SREK1-209ENST00000520953 IL1R1P14778 569 aa18.17■□□□□ 0.5
SREK1-209ENST00000520953 ZNF384Q8TF68 577 aa18.17■□□□□ 0.5
SREK1-209ENST00000520953 ZNF277Q9NRM2 450 aaPredicted RBP18.17■□□□□ 0.5
SREK1-209ENST00000520953 COL4A5P29400 1685 aa18.17■□□□□ 0.5
SREK1-209ENST00000520953 M0R2C6 588 aa18.17■□□□□ 0.5
SREK1-209ENST00000520953 SLC9C2Q5TAH2 1124 aa18.17■□□□□ 0.5
SREK1-209ENST00000520953 OSBP2Q969R2 916 aa18.17■□□□□ 0.5
SREK1-209ENST00000520953 MXD3Q9BW11 206 aa18.17■□□□□ 0.5
SREK1-209ENST00000520953 PDE6AP16499 860 aa18.16■□□□□ 0.5
SREK1-209ENST00000520953 PRDX5P30044 214 aa18.16■□□□□ 0.5
SREK1-209ENST00000520953 MAGEB6Q8N7X4 407 aa18.16■□□□□ 0.5
SREK1-209ENST00000520953 ANO2Q9NQ90 1003 aa18.16■□□□□ 0.5
SREK1-209ENST00000520953 RFX7Q2KHR2 1363 aa18.16■□□□□ 0.5
SREK1-209ENST00000520953 SEMA3EO15041 775 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 ADD2P35612 726 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 PTH1RQ03431 593 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 TTF1Q15361 905 aaPredicted RBP18.15■□□□□ 0.5
SREK1-209ENST00000520953 ZMYM1Q5SVZ6 1142 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 PUS7LQ9H0K6 701 aaKnown RBP18.15■□□□□ 0.5
SREK1-209ENST00000520953 LRP2BPQ9P2M1 347 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 SCN9AQ15858 1988 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 MAST3O60307 1309 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 ZNF532Q9HCE3 1301 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 CC2D2BQ6DHV5 1058 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 ADGRA1Q86SQ6 560 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 USP26Q9BXU7 913 aa18.15■□□□□ 0.5
SREK1-209ENST00000520953 EYA3Q99504 573 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 LSG1Q9H089 658 aaKnown RBP18.14■□□□□ 0.49
SREK1-209ENST00000520953 RAI14Q9P0K7 980 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 HIP1O00291 1037 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 GTF2IP78347 998 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 FBXW7Q969H0 707 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 SYT17Q9BSW7 474 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 C22orf23Q9BZE7 217 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 COA1Q9GZY4 146 aa18.14■□□□□ 0.49
SREK1-209ENST00000520953 NFKBIEO00221 500 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 PPIP5K2O43314 1243 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 KIAA2012Q0VF49 1180 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 VPS53Q5VIR6 699 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 RTKN2Q8IZC4 609 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 TBC1D32Q96NH3 1257 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 ECE2O60344 883 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.13■□□□□ 0.49
SREK1-209ENST00000520953 FER1L6Q2WGJ9 1857 aa18.13■□□□□ 0.49
SREK1-209ENST00000520953 PDS5AQ29RF7 1337 aaKnown RBP18.12■□□□□ 0.49
SREK1-209ENST00000520953 SOCS7O14512 581 aa18.12■□□□□ 0.49
SREK1-209ENST00000520953 PRELPP51888 382 aa18.12■□□□□ 0.49
SREK1-209ENST00000520953 RASSF7Q02833 373 aa18.12■□□□□ 0.49
SREK1-209ENST00000520953 MAP3K12Q12852 859 aa18.12■□□□□ 0.49
SREK1-209ENST00000520953 MCMDC2Q4G0Z9 681 aa18.12■□□□□ 0.49
SREK1-209ENST00000520953 PSMD1Q99460 953 aa18.12■□□□□ 0.49
SREK1-209ENST00000520953 YDJCA8MPS7 323 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 MECOMQ03112 1051 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 CERS5Q8N5B7 392 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 MIGA1Q8NAN2 632 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 RUFY2Q8WXA3 655 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 APPBP2Q92624 585 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 G3V3G9 751 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 REC8O95072 547 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 DCAF8Q5TAQ9 597 aa18.11■□□□□ 0.49
SREK1-209ENST00000520953 FOXP2O15409 715 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 MFSD14BQ5SR56 506 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 WDR66Q8TBY9 1149 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 NSUN4Q96CB9 384 aaKnown RBP18.1■□□□□ 0.49
SREK1-209ENST00000520953 UPF2Q9HAU5 1272 aaKnown RBP18.1■□□□□ 0.49
SREK1-209ENST00000520953 HELLSQ9NRZ9 838 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 PALD1Q9ULE6 856 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 ZNF646O15015 1829 aaPredicted RBP18.1■□□□□ 0.49
SREK1-209ENST00000520953 ZFYP08048 801 aaPredicted RBP18.1■□□□□ 0.49
SREK1-209ENST00000520953 CYP7A1P22680 504 aa18.1■□□□□ 0.49
SREK1-209ENST00000520953 UBE3CQ15386 1083 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms