RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 IFIT3O14879 490 aaKnown RBP13.33□□□□□ -0.28
CLK4-206ENST00000520878 CYP7A1P22680 504 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 TRIM29Q14134 588 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 SPATA5Q8NB90 893 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 PIH1D3Q9NQM4 214 aaKnown RBP13.33□□□□□ -0.28
CLK4-206ENST00000520878 CFAP45Q9UL16 551 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 GYG1P46976 350 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 HMGN5P82970 282 aaKnown RBP13.32□□□□□ -0.28
CLK4-206ENST00000520878 SLC4A4Q9Y6R1 1079 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 MED23Q9ULK4 1368 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 CCDC69A6NI79 296 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 PDE6AP16499 860 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 TTC6Q86TZ1 520 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 MYL10Q9BUA6 226 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 INCENPQ9NQS7 918 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 UBN2Q6ZU65 1347 aa13.32□□□□□ -0.28
CLK4-206ENST00000520878 CSF1RP07333 972 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 PARP10Q53GL7 1025 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 TMEM67Q5HYA8 995 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 PIBF1Q8WXW3 757 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 ERVV-1B6SEH8 477 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 CCDC192P0DO97 292 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 CTDSPL2Q05D32 466 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 USP21Q9UK80 565 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 PALLDQ8WX93 1383 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 RPAP1Q9BWH6 1393 aaPredicted RBP13.31□□□□□ -0.28
CLK4-206ENST00000520878 SPATA31A1Q5TZJ5 1347 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 LETM1O95202 739 aaPredicted RBP13.31□□□□□ -0.28
CLK4-206ENST00000520878 MAP3K11Q16584 847 aa13.31□□□□□ -0.28
CLK4-206ENST00000520878 SRP68Q9UHB9 627 aaKnown RBP13.31□□□□□ -0.28
CLK4-206ENST00000520878 TRPM3Q9HCF6 1732 aaPredicted RBP13.3□□□□□ -0.28
CLK4-206ENST00000520878 EIF5P55010 431 aaKnown RBP13.3□□□□□ -0.28
CLK4-206ENST00000520878 KIAA2012Q0VF49 1180 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 ZNF396Q96N95 335 aaPredicted RBP13.3□□□□□ -0.28
CLK4-206ENST00000520878 NLRP3Q96P20 1036 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
CLK4-206ENST00000520878 CHRNDQ07001 517 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 FTOQ9C0B1 505 aaKnown RBP eCLIP13.3□□□□□ -0.28
CLK4-206ENST00000520878 TFCP2L1Q9NZI6 479 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 ANKIB1Q9P2G1 1089 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 KDM3BQ7LBC6 1761 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 BECN2A8MW95 431 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 KINO60870 393 aaKnown RBP13.3□□□□□ -0.28
CLK4-206ENST00000520878 RFC4P35249 363 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 AKAP17AQ02040 695 aaKnown RBP13.3□□□□□ -0.28
CLK4-206ENST00000520878 ST3GAL1Q11201 340 aa13.3□□□□□ -0.28
CLK4-206ENST00000520878 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
CLK4-206ENST00000520878 LIG1P18858 919 aa13.29□□□□□ -0.28
CLK4-206ENST00000520878 METAP2P50579 478 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLK4-206ENST00000520878 PDIA3P30101 505 aaKnown RBP13.29□□□□□ -0.28
CLK4-206ENST00000520878 RASGRF1Q13972 1273 aa13.29□□□□□ -0.28
CLK4-206ENST00000520878 MFSD6Q6ZSS7 791 aa13.29□□□□□ -0.28
CLK4-206ENST00000520878 ZNF830Q96NB3 372 aaPredicted RBP13.29□□□□□ -0.28
CLK4-206ENST00000520878 GJB4Q9NTQ9 266 aa13.29□□□□□ -0.28
CLK4-206ENST00000520878 RTCBQ9Y3I0 505 aaKnown RBP13.29□□□□□ -0.28
CLK4-206ENST00000520878 MROH5Q6ZUA9 1318 aa13.29□□□□□ -0.28
CLK4-206ENST00000520878 PRKAB2O43741 272 aa13.29□□□□□ -0.28
CLK4-206ENST00000520878 RANBP6O60518 1105 aaKnown RBP13.29□□□□□ -0.28
CLK4-206ENST00000520878 SLC12A7Q9Y666 1083 aa13.29□□□□□ -0.28
CLK4-206ENST00000520878 GOLGA8AA7E2F4 631 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 GOLGA6L19H0YKK7 550 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 ADD1P35611 737 aaKnown RBP13.28□□□□□ -0.28
CLK4-206ENST00000520878 INTS5Q6P9B9 1019 aaKnown RBP13.28□□□□□ -0.28
CLK4-206ENST00000520878 LEO1Q8WVC0 666 aaPredicted RBP13.28□□□□□ -0.28
CLK4-206ENST00000520878 UBAC1Q9BSL1 405 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 COL15A1P39059 1388 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 PHKBQ93100 1093 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 PFKFB2O60825 505 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 ADD2P35612 726 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 ZNF34Q8IZ26 560 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
CLK4-206ENST00000520878 PRDM1O75626 825 aa13.27□□□□□ -0.28
CLK4-206ENST00000520878 PTF1AQ7RTS3 328 aa13.27□□□□□ -0.28
CLK4-206ENST00000520878 CCAR1Q8IX12 1150 aaKnown RBP13.27□□□□□ -0.28
CLK4-206ENST00000520878 SDR42E1Q8WUS8 393 aa13.27□□□□□ -0.28
CLK4-206ENST00000520878 AK7Q96M32 723 aa13.27□□□□□ -0.28
CLK4-206ENST00000520878 PDIA4P13667 645 aaKnown RBP13.27□□□□□ -0.29
CLK4-206ENST00000520878 ZSCAN30Q86W11 494 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 NSUN7Q8NE18 718 aaKnown RBP13.27□□□□□ -0.29
CLK4-206ENST00000520878 PLA2G12BQ9BX93 195 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 SLC26A6Q9BXS9 759 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 ZSCAN16Q9H4T2 348 aaPredicted RBP13.27□□□□□ -0.29
CLK4-206ENST00000520878 CDHR2Q9BYE9 1310 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 ALS2Q96Q42 1657 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 BCL9O00512 1426 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 TPTE2Q6XPS3 522 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 FSIP1Q8NA03 581 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 ERCC4Q92889 916 aaPredicted RBP13.27□□□□□ -0.29
CLK4-206ENST00000520878 KCNB2Q92953 911 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
CLK4-206ENST00000520878 ZBTB43O43298 467 aa13.26□□□□□ -0.29
CLK4-206ENST00000520878 ADCY5O95622 1261 aa13.26□□□□□ -0.29
CLK4-206ENST00000520878 THRAP3Q9Y2W1 955 aaKnown RBP13.26□□□□□ -0.29
CLK4-206ENST00000520878 STRCP1A6NGW2 1772 aa13.26□□□□□ -0.29
CLK4-206ENST00000520878 IARSP41252 1262 aaKnown RBP13.26□□□□□ -0.29
CLK4-206ENST00000520878 CMTR1Q8N1G2 835 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms