RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 GREM2Q9H772 168 aa11.8□□□□□ -0.52
SPARC-202ENST00000520687 TBC1D2BQ9UPU7 963 aa11.8□□□□□ -0.52
SPARC-202ENST00000520687 MYH3P11055 1940 aa11.8□□□□□ -0.52
SPARC-202ENST00000520687 LETM1O95202 739 aaPredicted RBP11.79□□□□□ -0.52
SPARC-202ENST00000520687 XRCC6P12956 609 aaKnown RBP eCLIP11.79□□□□□ -0.52
SPARC-202ENST00000520687 GJB2P29033 226 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 ME3Q16798 604 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 RC3H1Q5TC82 1133 aaKnown RBP11.79□□□□□ -0.52
SPARC-202ENST00000520687 CCDC83Q8IWF9 413 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 VGLL2Q8N8G2 317 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 TPCN1Q9ULQ1 816 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 F13A1P00488 732 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 CYP21A2P08686 494 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 HSPD1P10809 573 aaKnown RBP11.79□□□□□ -0.52
SPARC-202ENST00000520687 SLC5A1P13866 664 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 ARID4AP29374 1257 aaPredicted RBP11.79□□□□□ -0.52
SPARC-202ENST00000520687 RGS19P49795 217 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 FKBP4Q02790 459 aaKnown RBP eCLIP11.79□□□□□ -0.52
SPARC-202ENST00000520687 UBE3CQ15386 1083 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 ANP32BQ92688 251 aaKnown RBP11.79□□□□□ -0.52
SPARC-202ENST00000520687 ABHD8Q96I13 439 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
SPARC-202ENST00000520687 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 WDR19Q8NEZ3 1342 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 CNTNAP4Q9C0A0 1308 aa11.79□□□□□ -0.52
SPARC-202ENST00000520687 RIC1Q4ADV7 1423 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 CPA1P15085 419 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 HMGB2P26583 209 aaKnown RBP11.78□□□□□ -0.52
SPARC-202ENST00000520687 TOB2Q14106 344 aaPredicted RBP11.78□□□□□ -0.52
SPARC-202ENST00000520687 IMMTQ16891 758 aaKnown RBP11.78□□□□□ -0.52
SPARC-202ENST00000520687 SUSD4Q5VX71 490 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 RGS22Q8NE09 1264 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 MPHOSPH8Q99549 860 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 AGXT2Q9BYV1 514 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 MAST3O60307 1309 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 BCORQ6W2J9 1755 aa11.78□□□□□ -0.52
SPARC-202ENST00000520687 FGFR2P21802 821 aa11.77□□□□□ -0.53
SPARC-202ENST00000520687 ADORA1P30542 326 aa11.77□□□□□ -0.53
SPARC-202ENST00000520687 IGHMBP2P38935 993 aaKnown RBP11.77□□□□□ -0.53
SPARC-202ENST00000520687 HMGN5P82970 282 aaKnown RBP11.77□□□□□ -0.53
SPARC-202ENST00000520687 FGD1P98174 961 aa11.77□□□□□ -0.53
SPARC-202ENST00000520687 EXOSC10Q01780 885 aaKnown RBP11.77□□□□□ -0.53
SPARC-202ENST00000520687 ITPK1Q13572 414 aa11.77□□□□□ -0.53
SPARC-202ENST00000520687 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.53
SPARC-202ENST00000520687 LARP1BQ659C4 914 aaKnown RBP11.77□□□□□ -0.53
SPARC-202ENST00000520687 CAVIN1Q6NZI2 390 aaKnown RBP11.77□□□□□ -0.53
SPARC-202ENST00000520687 GTF3C6Q969F1 213 aa11.77□□□□□ -0.53
SPARC-202ENST00000520687 ZNF274Q96GC6 653 aaPredicted RBP11.77□□□□□ -0.53
SPARC-202ENST00000520687 SEC62Q99442 399 aaKnown RBP11.77□□□□□ -0.53
SPARC-202ENST00000520687 MTMR6Q9Y217 621 aa11.77□□□□□ -0.53
SPARC-202ENST00000520687 PFKFB2O60825 505 aa11.76□□□□□ -0.53
SPARC-202ENST00000520687 UBE2HP62256 183 aa11.76□□□□□ -0.53
SPARC-202ENST00000520687 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
SPARC-202ENST00000520687 GPT2Q8TD30 523 aa11.76□□□□□ -0.53
SPARC-202ENST00000520687 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
SPARC-202ENST00000520687 LAMB2P55268 1798 aa11.76□□□□□ -0.53
SPARC-202ENST00000520687 LY75O60449 1722 aa11.76□□□□□ -0.53
SPARC-202ENST00000520687 IGSF3O75054 1194 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 LARGE1O95461 756 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 NTSR2O95665 410 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 ZAP70P43403 619 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 CTCFP49711 727 aaPredicted RBP11.75□□□□□ -0.53
SPARC-202ENST00000520687 EVCP57679 992 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 ALX1Q15699 326 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 SLC10A5Q5PT55 438 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 MSL1Q68DK7 614 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 TMED8Q6PL24 325 aaPredicted RBP11.75□□□□□ -0.53
SPARC-202ENST00000520687 CCDC129Q6ZRS4 1044 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 Q6ZUG5 572 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 OSBP2Q969R2 916 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 NYXQ9GZU5 481 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 NIP7Q9Y221 180 aaKnown RBP eCLIP11.75□□□□□ -0.53
SPARC-202ENST00000520687 NDUFB9Q9Y6M9 179 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 ZMYM6O95789 1325 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 E7EWF7 191 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 ZBTB22O15209 634 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 FOXN1O15353 648 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 DHX16O60231 1041 aaKnown RBP11.75□□□□□ -0.53
SPARC-202ENST00000520687 ADD2P35612 726 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 SF3B3Q15393 1217 aaKnown RBP11.75□□□□□ -0.53
SPARC-202ENST00000520687 CCDC102BQ68D86 513 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 USP48Q86UV5 1035 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 SYNE4Q8N205 404 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
SPARC-202ENST00000520687 SCAND2PQ9GZW5 306 aaPredicted RBP11.75□□□□□ -0.53
SPARC-202ENST00000520687 ZSCAN16Q9H4T2 348 aaPredicted RBP11.75□□□□□ -0.53
SPARC-202ENST00000520687 TNRC6CQ9HCJ0 1690 aaKnown RBP11.74□□□□□ -0.53
SPARC-202ENST00000520687 ELP1O95163 1332 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 M0R2C6 588 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 MCAMP43121 646 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 KRT85P78386 507 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 ST3GAL1Q11201 340 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 MAP3K12Q12852 859 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 FOXD4L5Q5VV16 416 aaPredicted RBP11.74□□□□□ -0.53
SPARC-202ENST00000520687 ATL3Q6DD88 541 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 LRSAM1Q6UWE0 723 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
SPARC-202ENST00000520687 NECAB1Q8N987 351 aa11.74□□□□□ -0.53
SPARC-202ENST00000520687 FOXD4L4Q8WXT5 416 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms