RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 ATP2B4P23634 1241 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 GYG1P46976 350 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 KCNJ4P48050 445 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 BCAMP50895 628 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 TGFB2P61812 414 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 RASGRF1Q13972 1273 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 PI16Q6UXB8 463 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 TXNRD3Q86VQ6 643 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 KBTBD3Q8NAB2 608 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 DNAJC2Q99543 621 aaKnown RBP10.34□□□□□ -0.75
VAPB-206ENST00000520497 FOCADQ5VW36 1801 aa10.34□□□□□ -0.75
VAPB-206ENST00000520497 PDS5AQ29RF7 1337 aaKnown RBP10.33□□□□□ -0.76
VAPB-206ENST00000520497 ECM29Q5VYK3 1845 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 GOLIM4O00461 696 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 ZAP70P43403 619 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 CAVIN4Q5BKX8 364 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 OLFM4Q6UX06 510 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 SPATA5Q8NB90 893 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 TBC1D16Q8TBP0 767 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 ANTXR1Q9H6X2 564 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 SNRKQ9NRH2 765 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 HMG20BQ9P0W2 317 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 POLLQ9UGP5 575 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 GGA1Q9UJY5 639 aa10.33□□□□□ -0.76
VAPB-206ENST00000520497 NSFL1CQ9UNZ2 370 aaKnown RBP10.33□□□□□ -0.76
VAPB-206ENST00000520497 BAZ2AQ9UIF9 1905 aaKnown RBP10.33□□□□□ -0.76
VAPB-206ENST00000520497 HIP1O00291 1037 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 SEMA3EO15041 775 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 UFL1O94874 794 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 CYP2E1P05181 493 aaPredicted RBP10.32□□□□□ -0.76
VAPB-206ENST00000520497 DPEP1P16444 411 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 HIBADHP31937 336 aaKnown RBP10.32□□□□□ -0.76
VAPB-206ENST00000520497 MPNDQ8N594 471 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 TTLL6Q8N841 843 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 ESYT1Q9BSJ8 1104 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 FSD1Q9BTV5 496 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 IL25Q9H293 177 aa10.32□□□□□ -0.76
VAPB-206ENST00000520497 SGSM2O43147 1006 aa10.31□□□□□ -0.76
VAPB-206ENST00000520497 FKBP4Q02790 459 aaKnown RBP eCLIP10.31□□□□□ -0.76
VAPB-206ENST00000520497 TTF1Q15361 905 aaPredicted RBP10.31□□□□□ -0.76
VAPB-206ENST00000520497 CC2D2BQ6DHV5 1058 aa10.31□□□□□ -0.76
VAPB-206ENST00000520497 TDRD7Q8NHU6 1098 aaKnown RBP10.31□□□□□ -0.76
VAPB-206ENST00000520497 RTFDC1Q9BY42 306 aaPredicted RBP10.31□□□□□ -0.76
VAPB-206ENST00000520497 GNL3LQ9NVN8 582 aaKnown RBP10.31□□□□□ -0.76
VAPB-206ENST00000520497 DAXXQ9UER7 740 aaPredicted RBP10.31□□□□□ -0.76
VAPB-206ENST00000520497 LAMB1P07942 1786 aa10.31□□□□□ -0.76
VAPB-206ENST00000520497 RAD50Q92878 1312 aa10.31□□□□□ -0.76
VAPB-206ENST00000520497 ADAMTSL1Q8N6G6 1762 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 A0A0D9SFI3 127 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 IL1R1P14778 569 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 MFAP1P55081 439 aaKnown RBP10.3□□□□□ -0.76
VAPB-206ENST00000520497 NMIQ13287 307 aaPredicted RBP10.3□□□□□ -0.76
VAPB-206ENST00000520497 GRIPAP1Q4V328 841 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 DPP8Q6V1X1 898 aaPredicted RBP10.3□□□□□ -0.76
VAPB-206ENST00000520497 ZNF804AQ7Z570 1209 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 VPS37DQ86XT2 251 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 GPR101Q96P66 508 aaPredicted RBP10.3□□□□□ -0.76
VAPB-206ENST00000520497 PIH1D3Q9NQM4 214 aaKnown RBP10.3□□□□□ -0.76
VAPB-206ENST00000520497 DIAPH3Q9NSV4 1193 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 DENND2AQ9ULE3 1009 aa10.3□□□□□ -0.76
VAPB-206ENST00000520497 EPB41L2O43491 1005 aaKnown RBP10.29□□□□□ -0.76
VAPB-206ENST00000520497 REC8O95072 547 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 CHGBP05060 677 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 ZFYP08048 801 aaPredicted RBP10.29□□□□□ -0.76
VAPB-206ENST00000520497 ZMYM1Q5SVZ6 1142 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 CWC27Q6UX04 472 aaKnown RBP10.29□□□□□ -0.76
VAPB-206ENST00000520497 RUFY2Q8WXA3 655 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 FAM227BQ96M60 508 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 TBC1D32Q96NH3 1257 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 TMX4Q9H1E5 349 aaPredicted RBP10.29□□□□□ -0.76
VAPB-206ENST00000520497 CD209Q9NNX6 404 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 PIM2Q9P1W9 311 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 IQSEC3Q9UPP2 1182 aaPredicted RBP10.29□□□□□ -0.76
VAPB-206ENST00000520497 BCS1LQ9Y276 419 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 NAV1Q8NEY1 1877 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 SALL1Q9NSC2 1324 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 MYH1P12882 1939 aa10.29□□□□□ -0.76
VAPB-206ENST00000520497 COL4A5P29400 1685 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 RNF113AO15541 343 aaKnown RBP10.28□□□□□ -0.76
VAPB-206ENST00000520497 C21orf2O43822 256 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 ADD2P35612 726 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 RBM25P49756 843 aaKnown RBP10.28□□□□□ -0.76
VAPB-206ENST00000520497 LRRFIP1Q32MZ4 808 aaKnown RBP10.28□□□□□ -0.76
VAPB-206ENST00000520497 CCDC93Q567U6 631 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 ERICH6Q7L0X2 663 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 PSMD1Q99460 953 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 COA1Q9GZY4 146 aa10.28□□□□□ -0.76
VAPB-206ENST00000520497 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
VAPB-206ENST00000520497 DDX60LQ5H9U9 1706 aaKnown RBP10.27□□□□□ -0.76
VAPB-206ENST00000520497 MYH8P13535 1937 aa10.27□□□□□ -0.76
VAPB-206ENST00000520497 TCRBV5S4A2TA0A5A2 114 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 KIF3CO14782 793 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 PDE6AP16499 860 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 UBE3CQ15386 1083 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 SLFNL1Q499Z3 407 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 SOGA3Q5TF21 947 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
VAPB-206ENST00000520497 ARHGAP27Q6ZUM4 889 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms