RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 F8W735 103 aaPredicted RBP7.32□□□□□ -1.24
SQLE-204ENST00000520493 NEFLP07196 543 aa7.32□□□□□ -1.24
SQLE-204ENST00000520493 FBLN7Q53RD9 439 aa7.32□□□□□ -1.24
SQLE-204ENST00000520493 KLHL23Q8NBE8 558 aa7.32□□□□□ -1.24
SQLE-204ENST00000520493 CHRDQ9H2X0 955 aa7.32□□□□□ -1.24
SQLE-204ENST00000520493 CCDC87Q9NVE4 849 aa7.32□□□□□ -1.24
SQLE-204ENST00000520493 AMOTL2Q9Y2J4 779 aa7.32□□□□□ -1.24
SQLE-204ENST00000520493 PDE2AO00408 941 aaPredicted RBP7.31□□□□□ -1.24
SQLE-204ENST00000520493 CDC25BP30305 580 aa7.31□□□□□ -1.24
SQLE-204ENST00000520493 TXNDC11Q6PKC3 985 aa7.31□□□□□ -1.24
SQLE-204ENST00000520493 ABI1Q8IZP0 508 aa7.31□□□□□ -1.24
SQLE-204ENST00000520493 POP1Q99575 1024 aaKnown RBP7.31□□□□□ -1.24
SQLE-204ENST00000520493 ADAM19Q9H013 955 aa7.31□□□□□ -1.24
SQLE-204ENST00000520493 DZANK1Q9NVP4 752 aa7.31□□□□□ -1.24
SQLE-204ENST00000520493 H3BRJ5 948 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 FSCN2O14926 492 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 EREGO14944 169 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 CD68P34810 354 aaPredicted RBP7.3□□□□□ -1.24
SQLE-204ENST00000520493 PDE3BQ13370 1112 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 AGGF1Q8N302 714 aaeCLIP7.3□□□□□ -1.24
SQLE-204ENST00000520493 TMEM130Q8N3G9 435 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 WNT8BQ93098 351 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 OSMRQ99650 979 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 SEC31BQ9NQW1 1179 aa7.3□□□□□ -1.24
SQLE-204ENST00000520493 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
SQLE-204ENST00000520493 EPHA1P21709 976 aa7.29□□□□□ -1.24
SQLE-204ENST00000520493 ARL4DP49703 201 aa7.29□□□□□ -1.24
SQLE-204ENST00000520493 PIP4K2BP78356 416 aa7.29□□□□□ -1.24
SQLE-204ENST00000520493 NFIAQ12857 509 aa7.29□□□□□ -1.24
SQLE-204ENST00000520493 TMEM102Q8N9M5 508 aaPredicted RBP7.29□□□□□ -1.24
SQLE-204ENST00000520493 ASIC4Q96FT7 647 aa7.29□□□□□ -1.24
SQLE-204ENST00000520493 CARD10Q9BWT7 1032 aa7.29□□□□□ -1.24
SQLE-204ENST00000520493 SH2B1Q9NRF2 756 aaPredicted RBP7.29□□□□□ -1.24
SQLE-204ENST00000520493 ACPPP15309 386 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 ACAD11Q709F0 780 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 TXNDC2Q86VQ3 553 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 GALNT11Q8NCW6 608 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 BSNDQ8WZ55 320 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 TRAIPQ9BWF2 469 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 OSGEPQ9NPF4 335 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 PODXL2Q9NZ53 605 aa7.28□□□□□ -1.24
SQLE-204ENST00000520493 PRR19A6NJB7 356 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 NFKBIEO00221 500 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 DHX15O43143 795 aaKnown RBP7.27□□□□□ -1.25
SQLE-204ENST00000520493 TRIM26Q12899 539 aaPredicted RBP7.27□□□□□ -1.25
SQLE-204ENST00000520493 DUOXA2Q1HG44 320 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 TMC1Q8TDI8 760 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 CITED4Q96RK1 184 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 ZKSCAN3Q9BRR0 538 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 CEP41Q9BYV8 373 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 ZFYVE28Q9HCC9 887 aa7.27□□□□□ -1.25
SQLE-204ENST00000520493 TRPA1O75762 1119 aa7.26□□□□□ -1.25
SQLE-204ENST00000520493 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.26□□□□□ -1.25
SQLE-204ENST00000520493 ASAP3Q8TDY4 903 aa7.26□□□□□ -1.25
SQLE-204ENST00000520493 SLC7A3Q8WY07 619 aa7.26□□□□□ -1.25
SQLE-204ENST00000520493 NXPE3Q969Y0 559 aa7.26□□□□□ -1.25
SQLE-204ENST00000520493 UBL7Q96S82 380 aaPredicted RBP7.26□□□□□ -1.25
SQLE-204ENST00000520493 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.26□□□□□ -1.25
SQLE-204ENST00000520493 ZBTB7CA1YPR0 619 aa7.25□□□□□ -1.25
SQLE-204ENST00000520493 EIF4EBP3O60516 100 aaPredicted RBP7.25□□□□□ -1.25
SQLE-204ENST00000520493 BRD1O95696 1058 aa7.25□□□□□ -1.25
SQLE-204ENST00000520493 ARHGAP4P98171 946 aa7.25□□□□□ -1.25
SQLE-204ENST00000520493 IKBKEQ14164 716 aa7.25□□□□□ -1.25
SQLE-204ENST00000520493 TRIM42Q8IWZ5 723 aa7.25□□□□□ -1.25
SQLE-204ENST00000520493 HHIPQ96QV1 700 aa7.25□□□□□ -1.25
SQLE-204ENST00000520493 BHLHE41Q9C0J9 482 aaPredicted RBP7.25□□□□□ -1.25
SQLE-204ENST00000520493 SOX13Q9UN79 622 aa7.25□□□□□ -1.25
SQLE-204ENST00000520493 C19orf57Q0VDD7 668 aa7.24□□□□□ -1.25
SQLE-204ENST00000520493 RNF43Q68DV7 783 aa7.24□□□□□ -1.25
SQLE-204ENST00000520493 ADAMTSL4Q6UY14 1074 aa7.24□□□□□ -1.25
SQLE-204ENST00000520493 SPOCD1Q6ZMY3 1216 aa7.24□□□□□ -1.25
SQLE-204ENST00000520493 Q6ZS46 218 aa7.24□□□□□ -1.25
SQLE-204ENST00000520493 KLHDC7BQ96G42 594 aa7.24□□□□□ -1.25
SQLE-204ENST00000520493 C7orf69Q9H7B7 122 aa7.24□□□□□ -1.25
SQLE-204ENST00000520493 HMX2A2RU54 273 aa7.23□□□□□ -1.25
SQLE-204ENST00000520493 KRTAP9-7A8MTY7 169 aa7.23□□□□□ -1.25
SQLE-204ENST00000520493 CPNE3O75131 537 aaKnown RBP7.23□□□□□ -1.25
SQLE-204ENST00000520493 POLR3DP05423 398 aaPredicted RBP7.23□□□□□ -1.25
SQLE-204ENST00000520493 KRTAP5-3Q6L8H2 238 aa7.23□□□□□ -1.25
SQLE-204ENST00000520493 ARMC10Q8N2F6 343 aa7.23□□□□□ -1.25
SQLE-204ENST00000520493 DBNDD2Q9BQY9 259 aa7.23□□□□□ -1.25
SQLE-204ENST00000520493 LATS2Q9NRM7 1088 aa7.23□□□□□ -1.25
SQLE-204ENST00000520493 KCNK4Q9NYG8 393 aa7.23□□□□□ -1.25
SQLE-204ENST00000520493 BIN2Q9UBW5 565 aaPredicted RBP7.23□□□□□ -1.25
SQLE-204ENST00000520493 SOWAHDA6NJG2 315 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 WISP1O95388 367 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 NLRP12P59046 1061 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 ZNF124Q15973 351 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 ECM1Q16610 540 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 UVSSAQ2YD98 709 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 ZNF648Q5T619 568 aaPredicted RBP7.22□□□□□ -1.25
SQLE-204ENST00000520493 LCE5AQ5TCM9 118 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 PEAR1Q5VY43 1037 aaPredicted RBP7.22□□□□□ -1.25
SQLE-204ENST00000520493 GALNT12Q8IXK2 581 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 FOXD4L4Q8WXT5 416 aaPredicted RBP7.22□□□□□ -1.25
SQLE-204ENST00000520493 DMRTB1Q96MA1 342 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 FAM129BQ96TA1 746 aa7.22□□□□□ -1.25
SQLE-204ENST00000520493 GNEQ9Y223 722 aaKnown RBP7.22□□□□□ -1.25
SQLE-204ENST00000520493 DDX3YO15523 660 aaKnown RBP7.21□□□□□ -1.26
SQLE-204ENST00000520493 SART1O43290 800 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms