RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 GIMAP6Q6P9H5 292 aa30.35■■■□□ 2.45
COL13A1-213ENST00000520267 LPIN2Q92539 896 aa30.35■■■□□ 2.45
COL13A1-213ENST00000520267 DDX60Q8IY21 1712 aaKnown RBP30.35■■■□□ 2.45
COL13A1-213ENST00000520267 SPATA32Q96LK8 384 aa30.34■■■□□ 2.45
COL13A1-213ENST00000520267 SEC31BQ9NQW1 1179 aa30.34■■■□□ 2.45
COL13A1-213ENST00000520267 FBXL16Q8N461 479 aa30.34■■■□□ 2.45
COL13A1-213ENST00000520267 LEO1Q8WVC0 666 aaPredicted RBP30.33■■■□□ 2.45
COL13A1-213ENST00000520267 IDH1O75874 414 aaKnown RBP30.33■■■□□ 2.45
COL13A1-213ENST00000520267 ZSCAN30Q86W11 494 aa30.33■■■□□ 2.45
COL13A1-213ENST00000520267 FUCA2Q9BTY2 467 aa30.33■■■□□ 2.45
COL13A1-213ENST00000520267 CICQ96RK0 1608 aaPredicted RBP30.32■■■□□ 2.44
COL13A1-213ENST00000520267 UQCRFS1P1P0C7P4 283 aa30.32■■■□□ 2.44
COL13A1-213ENST00000520267 BARGINQ6ZT62 677 aa30.32■■■□□ 2.44
COL13A1-213ENST00000520267 ATRNO75882 1429 aa30.32■■■□□ 2.44
COL13A1-213ENST00000520267 SNAP23O00161 211 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 LIG1P18858 919 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 FOSBP53539 338 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 HMGN5P82970 282 aaKnown RBP30.31■■■□□ 2.44
COL13A1-213ENST00000520267 MB21D2Q8IYB1 491 aaPredicted RBP30.31■■■□□ 2.44
COL13A1-213ENST00000520267 SALL1Q9NSC2 1324 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 KCNQ2O43526 872 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 EVCP57679 992 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 PARP10Q53GL7 1025 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 HS1BP3Q53T59 392 aa30.31■■■□□ 2.44
COL13A1-213ENST00000520267 ZSCAN16Q9H4T2 348 aaPredicted RBP30.31■■■□□ 2.44
COL13A1-213ENST00000520267 MYH15Q9Y2K3 1946 aa30.3■■■□□ 2.44
COL13A1-213ENST00000520267 ZNF213O14771 459 aa30.3■■■□□ 2.44
COL13A1-213ENST00000520267 NIP7Q9Y221 180 aaKnown RBP eCLIP30.3■■■□□ 2.44
COL13A1-213ENST00000520267 PRC1O43663 620 aa30.3■■■□□ 2.44
COL13A1-213ENST00000520267 PPFIA3O75145 1194 aa30.3■■■□□ 2.44
COL13A1-213ENST00000520267 UBE3CQ15386 1083 aa30.3■■■□□ 2.44
COL13A1-213ENST00000520267 ZNF532Q9HCE3 1301 aa30.3■■■□□ 2.44
COL13A1-213ENST00000520267 ANO8Q9HCE9 1232 aaPredicted RBP30.3■■■□□ 2.44
COL13A1-213ENST00000520267 NTSR2O95665 410 aa30.29■■■□□ 2.44
COL13A1-213ENST00000520267 MPHOSPH8Q99549 860 aa30.29■■■□□ 2.44
COL13A1-213ENST00000520267 WWC3Q9ULE0 1092 aa30.29■■■□□ 2.44
COL13A1-213ENST00000520267 SLC5A1P13866 664 aa30.29■■■□□ 2.44
COL13A1-213ENST00000520267 PDE6AP16499 860 aa30.29■■■□□ 2.44
COL13A1-213ENST00000520267 ANTXR2P58335 489 aa30.29■■■□□ 2.44
COL13A1-213ENST00000520267 NAA16Q6N069 864 aaPredicted RBP30.29■■■□□ 2.44
COL13A1-213ENST00000520267 NCOA7Q8NI08 942 aa30.29■■■□□ 2.44
COL13A1-213ENST00000520267 MCM5P33992 734 aa30.28■■■□□ 2.44
COL13A1-213ENST00000520267 UVSSAQ2YD98 709 aa30.28■■■□□ 2.44
COL13A1-213ENST00000520267 TCRBV5S4A2TA0A5A2 114 aa30.27■■■□□ 2.44
COL13A1-213ENST00000520267 NBPF3Q9H094 633 aa30.27■■■□□ 2.44
COL13A1-213ENST00000520267 KLHL34Q8N239 644 aa30.27■■■□□ 2.44
COL13A1-213ENST00000520267 LAMB2P55268 1798 aa30.27■■■□□ 2.44
COL13A1-213ENST00000520267 PIP4K2BP78356 416 aa30.26■■■□□ 2.44
COL13A1-213ENST00000520267 PGBD1Q96JS3 809 aa30.26■■■□□ 2.44
COL13A1-213ENST00000520267 COL5A3P25940 1745 aaPredicted RBP30.26■■■□□ 2.43
COL13A1-213ENST00000520267 GOLGA6L4A6NEF3 574 aa30.26■■■□□ 2.43
COL13A1-213ENST00000520267 CCDC152Q4G0S7 254 aa30.26■■■□□ 2.43
COL13A1-213ENST00000520267 SPATA5Q8NB90 893 aa30.26■■■□□ 2.43
COL13A1-213ENST00000520267 KIF3AQ9Y496 699 aa30.26■■■□□ 2.43
COL13A1-213ENST00000520267 RALYLQ86SE5 291 aaKnown RBP30.25■■■□□ 2.43
COL13A1-213ENST00000520267 ADD1P35611 737 aaKnown RBP30.25■■■□□ 2.43
COL13A1-213ENST00000520267 RASGRF1Q13972 1273 aa30.25■■■□□ 2.43
COL13A1-213ENST00000520267 SMARCC1Q92922 1105 aaPredicted RBP30.25■■■□□ 2.43
COL13A1-213ENST00000520267 DOCK2Q92608 1830 aa30.24■■■□□ 2.43
COL13A1-213ENST00000520267 FDPSP14324 419 aaKnown RBP30.24■■■□□ 2.43
COL13A1-213ENST00000520267 KLF18A0A0U1RQI7 1052 aa30.24■■■□□ 2.43
COL13A1-213ENST00000520267 NUP62CLQ9H1M0 184 aa30.24■■■□□ 2.43
COL13A1-213ENST00000520267 DENND2AQ9ULE3 1009 aa30.24■■■□□ 2.43
COL13A1-213ENST00000520267 CARMIL3Q8ND23 1372 aa30.24■■■□□ 2.43
COL13A1-213ENST00000520267 APPP05067 770 aa30.23■■■□□ 2.43
COL13A1-213ENST00000520267 CHMP4CQ96CF2 233 aa30.23■■■□□ 2.43
COL13A1-213ENST00000520267 DACT1Q9NYF0 836 aa30.23■■■□□ 2.43
COL13A1-213ENST00000520267 BCORQ6W2J9 1755 aa30.23■■■□□ 2.43
COL13A1-213ENST00000520267 GUCY1B3Q02153 619 aa30.22■■■□□ 2.43
COL13A1-213ENST00000520267 CAMK4Q16566 473 aa30.22■■■□□ 2.43
COL13A1-213ENST00000520267 TBC1D10CQ8IV04 446 aa30.22■■■□□ 2.43
COL13A1-213ENST00000520267 NKX2-3Q8TAU0 364 aa30.22■■■□□ 2.43
COL13A1-213ENST00000520267 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.22■■■□□ 2.43
COL13A1-213ENST00000520267 CFAP45Q9UL16 551 aa30.22■■■□□ 2.43
COL13A1-213ENST00000520267 NOL7Q9UMY1 257 aaKnown RBP30.22■■■□□ 2.43
COL13A1-213ENST00000520267 HPS5Q9UPZ3 1129 aa30.22■■■□□ 2.43
COL13A1-213ENST00000520267 RTL9Q8NET4 1388 aa30.22■■■□□ 2.43
COL13A1-213ENST00000520267 IGHMBP2P38935 993 aaKnown RBP30.22■■■□□ 2.43
COL13A1-213ENST00000520267 STRBPQ96SI9 672 aaKnown RBP30.22■■■□□ 2.43
COL13A1-213ENST00000520267 MSNP26038 577 aaKnown RBP30.21■■■□□ 2.43
COL13A1-213ENST00000520267 COL4A1P02462 1669 aa30.21■■■□□ 2.43
COL13A1-213ENST00000520267 WDR19Q8NEZ3 1342 aa30.21■■■□□ 2.43
COL13A1-213ENST00000520267 CEBPZQ03701 1054 aaKnown RBP30.21■■■□□ 2.43
COL13A1-213ENST00000520267 FAM98CQ17RN3 349 aaKnown RBP30.21■■■□□ 2.43
COL13A1-213ENST00000520267 USP25Q9UHP3 1055 aa30.21■■■□□ 2.43
COL13A1-213ENST00000520267 GOLGA8BA8MQT2 603 aa30.2■■■□□ 2.43
COL13A1-213ENST00000520267 RAB11FIP4Q86YS3 637 aa30.2■■■□□ 2.43
COL13A1-213ENST00000520267 AIDAQ96BJ3 306 aa30.2■■■□□ 2.43
COL13A1-213ENST00000520267 MAP3K11Q16584 847 aa30.2■■■□□ 2.42
COL13A1-213ENST00000520267 MAGEB6Q8N7X4 407 aa30.2■■■□□ 2.42
COL13A1-213ENST00000520267 CCDC39Q9UFE4 941 aa30.2■■■□□ 2.42
COL13A1-213ENST00000520267 BCAMP50895 628 aa30.19■■■□□ 2.42
COL13A1-213ENST00000520267 LINC00116Q8NCU8 138 aa30.19■■■□□ 2.42
COL13A1-213ENST00000520267 FTOQ9C0B1 505 aaKnown RBP eCLIP30.19■■■□□ 2.42
COL13A1-213ENST00000520267 TRDNQ13061 729 aa30.19■■■□□ 2.42
COL13A1-213ENST00000520267 BICD2Q8TD16 824 aa30.19■■■□□ 2.42
COL13A1-213ENST00000520267 ZNF652Q9Y2D9 606 aa30.19■■■□□ 2.42
COL13A1-213ENST00000520267 CCDC192P0DO97 292 aa30.18■■■□□ 2.42
COL13A1-213ENST00000520267 CYB5R4Q7L1T6 521 aa30.18■■■□□ 2.42
COL13A1-213ENST00000520267 NR1I2O75469 434 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms