RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 GPATCH3Q96I76 525 aa17.39■□□□□ 0.37
VPS37A-206ENST00000520140 DNAJC2Q99543 621 aaKnown RBP17.39■□□□□ 0.37
VPS37A-206ENST00000520140 MXD3Q9BW11 206 aa17.39■□□□□ 0.37
VPS37A-206ENST00000520140 AKAP11Q9UKA4 1901 aa17.39■□□□□ 0.37
VPS37A-206ENST00000520140 COL1A1P02452 1464 aaPredicted RBP17.38■□□□□ 0.37
VPS37A-206ENST00000520140 PODNQ7Z5L7 613 aa17.38■□□□□ 0.37
VPS37A-206ENST00000520140 EDC3Q96F86 508 aaKnown RBP17.38■□□□□ 0.37
VPS37A-206ENST00000520140 VPS33BQ9H267 617 aa17.38■□□□□ 0.37
VPS37A-206ENST00000520140 HMG20BQ9P0W2 317 aa17.38■□□□□ 0.37
VPS37A-206ENST00000520140 ZNRF3Q9ULT6 936 aa17.38■□□□□ 0.37
VPS37A-206ENST00000520140 TIAM2Q8IVF5 1701 aa17.38■□□□□ 0.37
VPS37A-206ENST00000520140 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
VPS37A-206ENST00000520140 ZAP70P43403 619 aa17.37■□□□□ 0.37
VPS37A-206ENST00000520140 TTLL5Q6EMB2 1281 aa17.37■□□□□ 0.37
VPS37A-206ENST00000520140 TBC1D9Q6ZT07 1266 aa17.37■□□□□ 0.37
VPS37A-206ENST00000520140 SPATA5Q8NB90 893 aa17.37■□□□□ 0.37
VPS37A-206ENST00000520140 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
VPS37A-206ENST00000520140 MYO5AQ9Y4I1 1855 aaKnown RBP17.36■□□□□ 0.37
VPS37A-206ENST00000520140 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
VPS37A-206ENST00000520140 TTC41PQ6P2S7 1318 aa17.36■□□□□ 0.37
VPS37A-206ENST00000520140 ATP5JP18859 108 aa17.36■□□□□ 0.37
VPS37A-206ENST00000520140 CXCL9Q07325 125 aa17.36■□□□□ 0.37
VPS37A-206ENST00000520140 ANTXR1Q9H6X2 564 aa17.36■□□□□ 0.37
VPS37A-206ENST00000520140 ZNF541Q9H0D2 1346 aa17.36■□□□□ 0.37
VPS37A-206ENST00000520140 ABCF2Q9UG63 623 aa17.35■□□□□ 0.37
VPS37A-206ENST00000520140 DENND2AQ9ULE3 1009 aa17.35■□□□□ 0.37
VPS37A-206ENST00000520140 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
VPS37A-206ENST00000520140 GOLIM4O00461 696 aa17.35■□□□□ 0.37
VPS37A-206ENST00000520140 PSMD14O00487 310 aa17.35■□□□□ 0.37
VPS37A-206ENST00000520140 ERC2O15083 957 aa17.35■□□□□ 0.37
VPS37A-206ENST00000520140 STAP2Q9UGK3 403 aa17.35■□□□□ 0.37
VPS37A-206ENST00000520140 ZBTB12Q9Y330 459 aaPredicted RBP17.35■□□□□ 0.37
VPS37A-206ENST00000520140 USP17L3A6NCW0 530 aa17.34■□□□□ 0.37
VPS37A-206ENST00000520140 USP17L4A6NCW7 530 aa17.34■□□□□ 0.37
VPS37A-206ENST00000520140 FZD9O00144 591 aa17.34■□□□□ 0.37
VPS37A-206ENST00000520140 CYP2E1P05181 493 aaPredicted RBP17.34■□□□□ 0.37
VPS37A-206ENST00000520140 EIF6P56537 245 aaKnown RBP17.34■□□□□ 0.37
VPS37A-206ENST00000520140 MFSD14BQ5SR56 506 aa17.34■□□□□ 0.37
VPS37A-206ENST00000520140 USP17L1Q7RTZ2 530 aa17.34■□□□□ 0.37
VPS37A-206ENST00000520140 F8W031 263 aaPredicted RBP17.33■□□□□ 0.37
VPS37A-206ENST00000520140 GLRX3O76003 335 aaKnown RBP17.33■□□□□ 0.37
VPS37A-206ENST00000520140 ZNF512BQ96KM6 892 aaPredicted RBP17.33■□□□□ 0.37
VPS37A-206ENST00000520140 GRIK5Q16478 980 aa17.33■□□□□ 0.36
VPS37A-206ENST00000520140 CIAPIN1Q6FI81 312 aa17.33■□□□□ 0.36
VPS37A-206ENST00000520140 CERS5Q8N5B7 392 aa17.33■□□□□ 0.36
VPS37A-206ENST00000520140 HAUS7Q99871 368 aa17.33■□□□□ 0.36
VPS37A-206ENST00000520140 ZNF646O15015 1829 aaPredicted RBP17.32■□□□□ 0.36
VPS37A-206ENST00000520140 PSME4Q14997 1843 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 TRIM6-TRIM34B2RNG4 842 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 SEMA3EO15041 775 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 PAG1Q9NWQ8 432 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 PRDX5P30044 214 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 DACT2Q5SW24 774 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 STRIP1Q5VSL9 837 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 RILPL2Q969X0 211 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 OSBPL3Q9H4L5 887 aa17.32■□□□□ 0.36
VPS37A-206ENST00000520140 DDNO94850 711 aaPredicted RBP17.31■□□□□ 0.36
VPS37A-206ENST00000520140 GSPT1P15170 499 aaKnown RBP17.31■□□□□ 0.36
VPS37A-206ENST00000520140 KIAA0825Q8IV33 1275 aa17.31■□□□□ 0.36
VPS37A-206ENST00000520140 PIH1D3Q9NQM4 214 aaKnown RBP17.31■□□□□ 0.36
VPS37A-206ENST00000520140 FAM205AQ6ZU69 1335 aa17.31■□□□□ 0.36
VPS37A-206ENST00000520140 WDR66Q8TBY9 1149 aa17.3■□□□□ 0.36
VPS37A-206ENST00000520140 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.3■□□□□ 0.36
VPS37A-206ENST00000520140 LRP2BPQ9P2M1 347 aa17.3■□□□□ 0.36
VPS37A-206ENST00000520140 AK9Q5TCS8 1911 aa17.3■□□□□ 0.36
VPS37A-206ENST00000520140 IDH1O75874 414 aaKnown RBP17.3■□□□□ 0.36
VPS37A-206ENST00000520140 TTC22Q5TAA0 569 aa17.3■□□□□ 0.36
VPS37A-206ENST00000520140 CHGBP05060 677 aa17.29■□□□□ 0.36
VPS37A-206ENST00000520140 TNIP1Q15025 636 aa17.29■□□□□ 0.36
VPS37A-206ENST00000520140 AOX1Q06278 1338 aa17.29■□□□□ 0.36
VPS37A-206ENST00000520140 VIL1P09327 827 aaKnown RBP17.29■□□□□ 0.36
VPS37A-206ENST00000520140 RSBN1LQ6PCB5 846 aaPredicted RBP17.29■□□□□ 0.36
VPS37A-206ENST00000520140 RAI14Q9P0K7 980 aa17.29■□□□□ 0.36
VPS37A-206ENST00000520140 SHTN1A0MZ66 631 aa17.28■□□□□ 0.36
VPS37A-206ENST00000520140 SCNN1DP51172 638 aa17.28■□□□□ 0.36
VPS37A-206ENST00000520140 SLFNL1Q499Z3 407 aa17.28■□□□□ 0.36
VPS37A-206ENST00000520140 TBC1D22AQ8WUA7 517 aa17.28■□□□□ 0.36
VPS37A-206ENST00000520140 LDHBP07195 334 aaKnown RBP17.27■□□□□ 0.36
VPS37A-206ENST00000520140 GMPSP49915 693 aaPredicted RBP17.27■□□□□ 0.36
VPS37A-206ENST00000520140 TTF2Q9UNY4 1162 aaKnown RBP17.27■□□□□ 0.36
VPS37A-206ENST00000520140 PDS5AQ29RF7 1337 aaKnown RBP17.27■□□□□ 0.36
VPS37A-206ENST00000520140 DPY19L2Q6NUT2 758 aa17.27■□□□□ 0.35
VPS37A-206ENST00000520140 ERICH6Q7L0X2 663 aa17.27■□□□□ 0.35
VPS37A-206ENST00000520140 GPC2Q8N158 579 aa17.27■□□□□ 0.35
VPS37A-206ENST00000520140 ZNF526Q8TF50 670 aaPredicted RBP17.27■□□□□ 0.35
VPS37A-206ENST00000520140 FSD1Q9BTV5 496 aa17.27■□□□□ 0.35
VPS37A-206ENST00000520140 ADAMTSL1Q8N6G6 1762 aa17.27■□□□□ 0.35
VPS37A-206ENST00000520140 SDSP20132 328 aa17.26■□□□□ 0.35
VPS37A-206ENST00000520140 TTF1Q15361 905 aaPredicted RBP17.26■□□□□ 0.35
VPS37A-206ENST00000520140 DIXDC1Q155Q3 683 aa17.26■□□□□ 0.35
VPS37A-206ENST00000520140 DZIP1Q86YF9 867 aaKnown RBP17.26■□□□□ 0.35
VPS37A-206ENST00000520140 DOCK2Q92608 1830 aa17.26■□□□□ 0.35
VPS37A-206ENST00000520140 ZGPATQ8N5A5 531 aaKnown RBP17.26■□□□□ 0.35
VPS37A-206ENST00000520140 TSHZ2Q9NRE2 1034 aa17.26■□□□□ 0.35
VPS37A-206ENST00000520140 SALL1Q9NSC2 1324 aa17.25■□□□□ 0.35
VPS37A-206ENST00000520140 MYH7P12883 1935 aa17.25■□□□□ 0.35
VPS37A-206ENST00000520140 MECOMQ03112 1051 aa17.25■□□□□ 0.35
VPS37A-206ENST00000520140 SLC9C2Q5TAH2 1124 aa17.25■□□□□ 0.35
VPS37A-206ENST00000520140 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
VPS37A-206ENST00000520140 EVI5LQ96CN4 794 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms