RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 FOXO4P98177 505 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 CALD1Q05682 793 aaKnown RBP11.12□□□□□ -0.63
PABPC1-213ENST00000519848 KIF4BQ2VIQ3 1234 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 RBM26Q5T8P6 1007 aaKnown RBP11.12□□□□□ -0.63
PABPC1-213ENST00000519848 SPOCK2Q92563 424 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 KAZALD1Q96I82 304 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 PAPPA2Q9BXP8 1791 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 MED23Q9ULK4 1368 aa11.12□□□□□ -0.63
PABPC1-213ENST00000519848 TNIP1Q15025 636 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 CCDC152Q4G0S7 254 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 BEND3Q5T5X7 828 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 MOB2Q70IA6 237 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 ANKRD18AQ8IVF6 992 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 DPF2Q92785 391 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 PLA2G12BQ9BX93 195 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 GGA1Q9UJY5 639 aa11.11□□□□□ -0.63
PABPC1-213ENST00000519848 XDHP47989 1333 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 CSF1RP07333 972 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 NUDT7P0C024 238 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 ZNF280AP59817 542 aaPredicted RBP11.1□□□□□ -0.63
PABPC1-213ENST00000519848 DACT2Q5SW24 774 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 PRAMEF18Q5VWM3 479 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 CERS5Q8N5B7 392 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 ANKIB1Q9P2G1 1089 aa11.1□□□□□ -0.63
PABPC1-213ENST00000519848 ITGA6P23229 1130 aa11.09□□□□□ -0.63
PABPC1-213ENST00000519848 CCT4P50991 539 aaKnown RBP11.09□□□□□ -0.63
PABPC1-213ENST00000519848 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-213ENST00000519848 RSBN1LQ6PCB5 846 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-213ENST00000519848 PAXIP1Q6ZW49 1069 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-213ENST00000519848 KRT26Q7Z3Y9 468 aa11.09□□□□□ -0.63
PABPC1-213ENST00000519848 FAM9BQ8IZU0 186 aa11.09□□□□□ -0.63
PABPC1-213ENST00000519848 HELBQ8NG08 1087 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-213ENST00000519848 ZNF594Q96JF6 807 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-213ENST00000519848 PRDM10Q9NQV6 1147 aa11.09□□□□□ -0.63
PABPC1-213ENST00000519848 BSDC1Q9NW68 430 aaPredicted RBP11.09□□□□□ -0.63
PABPC1-213ENST00000519848 LAMB1P07942 1786 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 DDX58O95786 925 aaKnown RBP11.08□□□□□ -0.64
PABPC1-213ENST00000519848 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-213ENST00000519848 NBPF9Q3BBW0 867 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 ANGEL2Q5VTE6 544 aaKnown RBP11.08□□□□□ -0.64
PABPC1-213ENST00000519848 CDC37L1Q7L3B6 337 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 IFNLR1Q8IU57 520 aaPredicted RBP11.08□□□□□ -0.64
PABPC1-213ENST00000519848 WDR63Q8IWG1 891 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 LINS1Q8NG48 757 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 ZC3H15Q8WU90 426 aaKnown RBP11.08□□□□□ -0.64
PABPC1-213ENST00000519848 CDCA5Q96FF9 252 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 FZD1Q9UP38 647 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 LHX6Q9UPM6 363 aa11.08□□□□□ -0.64
PABPC1-213ENST00000519848 TAF5LO75529 589 aa11.07□□□□□ -0.64
PABPC1-213ENST00000519848 SASH1O94885 1247 aa11.07□□□□□ -0.64
PABPC1-213ENST00000519848 RPS12P25398 132 aaKnown RBP11.07□□□□□ -0.64
PABPC1-213ENST00000519848 CHRNDQ07001 517 aa11.07□□□□□ -0.64
PABPC1-213ENST00000519848 ADGRD1Q6QNK2 874 aa11.07□□□□□ -0.64
PABPC1-213ENST00000519848 SUCLG2Q96I99 432 aa11.07□□□□□ -0.64
PABPC1-213ENST00000519848 EYA3Q99504 573 aa11.07□□□□□ -0.64
PABPC1-213ENST00000519848 ZC3H12CQ9C0D7 883 aaKnown RBP11.07□□□□□ -0.64
PABPC1-213ENST00000519848 TMX4Q9H1E5 349 aaPredicted RBP11.07□□□□□ -0.64
PABPC1-213ENST00000519848 JAG2Q9Y219 1238 aa11.07□□□□□ -0.64
PABPC1-213ENST00000519848 H7C1D1 291 aa11.06□□□□□ -0.64
PABPC1-213ENST00000519848 ANP32CO43423 234 aa11.06□□□□□ -0.64
PABPC1-213ENST00000519848 ATP2B4P23634 1241 aa11.06□□□□□ -0.64
PABPC1-213ENST00000519848 SCARF1Q14162 830 aa11.06□□□□□ -0.64
PABPC1-213ENST00000519848 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
PABPC1-213ENST00000519848 ZBED3Q96IU2 234 aaPredicted RBP11.06□□□□□ -0.64
PABPC1-213ENST00000519848 PUS3Q9BZE2 481 aaKnown RBP11.06□□□□□ -0.64
PABPC1-213ENST00000519848 MYOZ2Q9NPC6 264 aa11.06□□□□□ -0.64
PABPC1-213ENST00000519848 USP17L3A6NCW0 530 aa11.05□□□□□ -0.64
PABPC1-213ENST00000519848 USP17L4A6NCW7 530 aa11.05□□□□□ -0.64
PABPC1-213ENST00000519848 NBPF7P0C2Y1 421 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-213ENST00000519848 HUNKP57058 714 aa11.05□□□□□ -0.64
PABPC1-213ENST00000519848 GRIK5Q16478 980 aa11.05□□□□□ -0.64
PABPC1-213ENST00000519848 USP17L1Q7RTZ2 530 aa11.05□□□□□ -0.64
PABPC1-213ENST00000519848 ANKRD44Q8N8A2 993 aa11.05□□□□□ -0.64
PABPC1-213ENST00000519848 CDC5LQ99459 802 aaKnown RBP11.05□□□□□ -0.64
PABPC1-213ENST00000519848 GBA2Q9HCG7 927 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-213ENST00000519848 COL1A1P02452 1464 aaPredicted RBP11.05□□□□□ -0.64
PABPC1-213ENST00000519848 ZNF804BA4D1E1 1349 aa11.05□□□□□ -0.64
PABPC1-213ENST00000519848 WNT10BO00744 389 aa11.04□□□□□ -0.64
PABPC1-213ENST00000519848 SLC10A3P09131 477 aa11.04□□□□□ -0.64
PABPC1-213ENST00000519848 NEXNQ0ZGT2 675 aa11.04□□□□□ -0.64
PABPC1-213ENST00000519848 LMBR1LQ6UX01 489 aa11.04□□□□□ -0.64
PABPC1-213ENST00000519848 RASAL3Q86YV0 1011 aa11.04□□□□□ -0.64
PABPC1-213ENST00000519848 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
PABPC1-213ENST00000519848 AGBL3Q8NEM8 1001 aa11.04□□□□□ -0.64
PABPC1-213ENST00000519848 HHIPL1Q96JK4 782 aa11.04□□□□□ -0.64
PABPC1-213ENST00000519848 GRM8O00222 908 aa11.03□□□□□ -0.64
PABPC1-213ENST00000519848 USP17L8P0C7I0 530 aa11.03□□□□□ -0.64
PABPC1-213ENST00000519848 ECE1P42892 770 aa11.03□□□□□ -0.64
PABPC1-213ENST00000519848 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-213ENST00000519848 KIAA0825Q8IV33 1275 aa11.03□□□□□ -0.64
PABPC1-213ENST00000519848 AIDAQ96BJ3 306 aa11.03□□□□□ -0.64
PABPC1-213ENST00000519848 ABHD8Q96I13 439 aa11.03□□□□□ -0.64
PABPC1-213ENST00000519848 AKAP11Q9UKA4 1901 aa11.02□□□□□ -0.65
PABPC1-213ENST00000519848 MAP2K2P36507 400 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms