RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 ZNF532Q9HCE3 1301 aa21.97■■□□□ 1.11
FAM49B-214ENST00000519540 TCRBV5S4A2TA0A5A2 114 aa21.97■■□□□ 1.11
FAM49B-214ENST00000519540 TM4SF1P30408 202 aa21.97■■□□□ 1.11
FAM49B-214ENST00000519540 ZNF772Q68DY9 489 aaPredicted RBP21.97■■□□□ 1.11
FAM49B-214ENST00000519540 SMC3Q9UQE7 1217 aa21.97■■□□□ 1.11
FAM49B-214ENST00000519540 WTIPA6NIX2 430 aaPredicted RBP21.96■■□□□ 1.11
FAM49B-214ENST00000519540 E7EWF7 191 aa21.96■■□□□ 1.11
FAM49B-214ENST00000519540 FGAP02671 866 aa21.96■■□□□ 1.11
FAM49B-214ENST00000519540 DOCK2Q92608 1830 aa21.96■■□□□ 1.11
FAM49B-214ENST00000519540 ZNF804BA4D1E1 1349 aa21.96■■□□□ 1.11
FAM49B-214ENST00000519540 NECAB1Q8N987 351 aa21.96■■□□□ 1.11
FAM49B-214ENST00000519540 LAMA4Q16363 1823 aa21.95■■□□□ 1.11
FAM49B-214ENST00000519540 NPHP1O15259 732 aa21.95■■□□□ 1.1
FAM49B-214ENST00000519540 MAP3K12Q12852 859 aa21.95■■□□□ 1.1
FAM49B-214ENST00000519540 DHX32Q7L7V1 743 aaKnown RBP21.95■■□□□ 1.1
FAM49B-214ENST00000519540 GYS1P13807 737 aa21.94■■□□□ 1.1
FAM49B-214ENST00000519540 FOXD4L5Q5VV16 416 aaPredicted RBP21.94■■□□□ 1.1
FAM49B-214ENST00000519540 MCTP1Q6DN14 999 aa21.94■■□□□ 1.1
FAM49B-214ENST00000519540 Q6ZUG5 572 aa21.94■■□□□ 1.1
FAM49B-214ENST00000519540 PROM2Q8N271 834 aa21.94■■□□□ 1.1
FAM49B-214ENST00000519540 FOXD4L4Q8WXT5 416 aaPredicted RBP21.94■■□□□ 1.1
FAM49B-214ENST00000519540 WDR33Q9C0J8 1336 aaKnown RBP21.94■■□□□ 1.1
FAM49B-214ENST00000519540 GYG1P46976 350 aa21.94■■□□□ 1.1
FAM49B-214ENST00000519540 EXOSC10Q01780 885 aaKnown RBP21.94■■□□□ 1.1
FAM49B-214ENST00000519540 SKOR2Q2VWA4 1001 aaPredicted RBP21.94■■□□□ 1.1
FAM49B-214ENST00000519540 TNRC6CQ9HCJ0 1690 aaKnown RBP21.93■■□□□ 1.1
FAM49B-214ENST00000519540 TXNRD1Q16881 649 aa21.93■■□□□ 1.1
FAM49B-214ENST00000519540 IMMTQ16891 758 aaKnown RBP21.93■■□□□ 1.1
FAM49B-214ENST00000519540 CNBD1Q8NA66 436 aa21.93■■□□□ 1.1
FAM49B-214ENST00000519540 MAGEB6Q8N7X4 407 aa21.92■■□□□ 1.1
FAM49B-214ENST00000519540 ANKRD2Q9GZV1 360 aa21.92■■□□□ 1.1
FAM49B-214ENST00000519540 GNL3LQ9NVN8 582 aaKnown RBP21.92■■□□□ 1.1
FAM49B-214ENST00000519540 GJB2P29033 226 aa21.92■■□□□ 1.1
FAM49B-214ENST00000519540 CAVIN4Q5BKX8 364 aa21.92■■□□□ 1.1
FAM49B-214ENST00000519540 EP400Q96L91 3159 aa21.92■■□□□ 1.1
FAM49B-214ENST00000519540 SYT1P21579 422 aa21.91■■□□□ 1.1
FAM49B-214ENST00000519540 FAM84BQ96KN1 310 aaPredicted RBP21.91■■□□□ 1.1
FAM49B-214ENST00000519540 STRBPQ96SI9 672 aaKnown RBP21.91■■□□□ 1.1
FAM49B-214ENST00000519540 IQSEC3Q9UPP2 1182 aaPredicted RBP21.91■■□□□ 1.1
FAM49B-214ENST00000519540 HMGB2P26583 209 aaKnown RBP21.9■■□□□ 1.1
FAM49B-214ENST00000519540 PRR5LQ6MZQ0 368 aa21.9■■□□□ 1.1
FAM49B-214ENST00000519540 HAND2P61296 217 aa21.9■■□□□ 1.1
FAM49B-214ENST00000519540 BRF1Q92994 677 aa21.9■■□□□ 1.1
FAM49B-214ENST00000519540 AIDAQ96BJ3 306 aa21.9■■□□□ 1.1
FAM49B-214ENST00000519540 LRRC2Q9BYS8 371 aa21.9■■□□□ 1.1
FAM49B-214ENST00000519540 AGXT2Q9BYV1 514 aa21.9■■□□□ 1.1
FAM49B-214ENST00000519540 STX6O43752 255 aa21.89■■□□□ 1.1
FAM49B-214ENST00000519540 LMBRD1Q9NUN5 540 aa21.89■■□□□ 1.1
FAM49B-214ENST00000519540 LRP2BPQ9P2M1 347 aa21.89■■□□□ 1.1
FAM49B-214ENST00000519540 ZNF213O14771 459 aa21.89■■□□□ 1.09
FAM49B-214ENST00000519540 FGD1P98174 961 aa21.89■■□□□ 1.09
FAM49B-214ENST00000519540 FBXO33Q7Z6M2 555 aa21.89■■□□□ 1.09
FAM49B-214ENST00000519540 VPS37DQ86XT2 251 aa21.89■■□□□ 1.09
FAM49B-214ENST00000519540 CHAMP1Q96JM3 812 aa21.89■■□□□ 1.09
FAM49B-214ENST00000519540 GZF1Q9H116 711 aaPredicted RBP21.89■■□□□ 1.09
FAM49B-214ENST00000519540 DTNBO60941 627 aa21.88■■□□□ 1.09
FAM49B-214ENST00000519540 STK3Q13188 491 aa21.88■■□□□ 1.09
FAM49B-214ENST00000519540 PLSCR1O15162 318 aa21.87■■□□□ 1.09
FAM49B-214ENST00000519540 APPP05067 770 aa21.87■■□□□ 1.09
FAM49B-214ENST00000519540 SERPINB2P05120 415 aa21.87■■□□□ 1.09
FAM49B-214ENST00000519540 ZSCAN22P10073 491 aaPredicted RBP21.87■■□□□ 1.09
FAM49B-214ENST00000519540 COL1A1P02452 1464 aaPredicted RBP21.87■■□□□ 1.09
FAM49B-214ENST00000519540 GRAPQ13588 217 aa21.87■■□□□ 1.09
FAM49B-214ENST00000519540 ALX1Q15699 326 aa21.87■■□□□ 1.09
FAM49B-214ENST00000519540 GRAPLQ8TC17 118 aaPredicted RBP21.87■■□□□ 1.09
FAM49B-214ENST00000519540 GTF3C6Q969F1 213 aa21.87■■□□□ 1.09
FAM49B-214ENST00000519540 DENND2AQ9ULE3 1009 aa21.87■■□□□ 1.09
FAM49B-214ENST00000519540 PATL2C9JE40 543 aaKnown RBP21.86■■□□□ 1.09
FAM49B-214ENST00000519540 MBD4O95243 580 aa21.86■■□□□ 1.09
FAM49B-214ENST00000519540 KLRK1P26718 216 aa21.86■■□□□ 1.09
FAM49B-214ENST00000519540 FBXL16Q8N461 479 aa21.86■■□□□ 1.09
FAM49B-214ENST00000519540 SEMA3EO15041 775 aa21.85■■□□□ 1.09
FAM49B-214ENST00000519540 PRPF40AO75400 957 aaKnown RBP21.85■■□□□ 1.09
FAM49B-214ENST00000519540 KLHL40Q2TBA0 621 aa21.85■■□□□ 1.09
FAM49B-214ENST00000519540 CHST3Q7LGC8 479 aa21.85■■□□□ 1.09
FAM49B-214ENST00000519540 NCOA7Q8NI08 942 aa21.85■■□□□ 1.09
FAM49B-214ENST00000519540 NBPF3Q9H094 633 aa21.85■■□□□ 1.09
FAM49B-214ENST00000519540 ARMT1Q9H993 441 aa21.85■■□□□ 1.09
FAM49B-214ENST00000519540 ABCF2Q9UG63 623 aa21.85■■□□□ 1.09
FAM49B-214ENST00000519540 DDX49Q9Y6V7 483 aaKnown RBP21.85■■□□□ 1.09
FAM49B-214ENST00000519540 PFKFB2O60825 505 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 ST5P78524 1137 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 APOBRQ0VD83 1088 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 CRY2Q49AN0 593 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 MB21D2Q8IYB1 491 aaPredicted RBP21.84■■□□□ 1.09
FAM49B-214ENST00000519540 MTMR6Q9Y217 621 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 ZMYM6O95789 1325 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 APBA3O96018 575 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 PDIA4P13667 645 aaKnown RBP21.84■■□□□ 1.09
FAM49B-214ENST00000519540 HIBADHP31937 336 aaKnown RBP21.84■■□□□ 1.09
FAM49B-214ENST00000519540 PNPLA7Q6ZV29 1317 aa21.84■■□□□ 1.09
FAM49B-214ENST00000519540 F13A1P00488 732 aa21.83■■□□□ 1.09
FAM49B-214ENST00000519540 RXRBP28702 533 aa21.83■■□□□ 1.09
FAM49B-214ENST00000519540 MCM5P33992 734 aa21.83■■□□□ 1.09
FAM49B-214ENST00000519540 DDR1Q08345 913 aa21.83■■□□□ 1.09
FAM49B-214ENST00000519540 LARP1BQ659C4 914 aaKnown RBP21.83■■□□□ 1.09
FAM49B-214ENST00000519540 IFNL3Q8IZI9 196 aa21.83■■□□□ 1.09
FAM49B-214ENST00000519540 TFCP2L1Q9NZI6 479 aa21.83■■□□□ 1.09
FAM49B-214ENST00000519540 RAI14Q9P0K7 980 aa21.83■■□□□ 1.09
FAM49B-214ENST00000519540 PDS5AQ29RF7 1337 aaKnown RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms