RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 LEMD3Q9Y2U8 911 aa6.47□□□□□ -1.37
CSMD3-209ENST00000519485 GAS2O43903 313 aaKnown RBP6.46□□□□□ -1.38
CSMD3-209ENST00000519485 ATG7O95352 703 aa6.46□□□□□ -1.38
CSMD3-209ENST00000519485 F13BP05160 661 aa6.46□□□□□ -1.38
CSMD3-209ENST00000519485 NAA30Q147X3 362 aaPredicted RBP6.46□□□□□ -1.38
CSMD3-209ENST00000519485 NFXL1Q6ZNB6 911 aa6.46□□□□□ -1.38
CSMD3-209ENST00000519485 ZNF438Q7Z4V0 828 aa6.46□□□□□ -1.38
CSMD3-209ENST00000519485 PMEPA1Q969W9 287 aa6.46□□□□□ -1.38
CSMD3-209ENST00000519485 NUDT16Q96DE0 195 aaKnown RBP6.46□□□□□ -1.38
CSMD3-209ENST00000519485 MKNK1Q9BUB5 465 aa6.46□□□□□ -1.38
CSMD3-209ENST00000519485 METTL22Q9BUU2 404 aaPredicted RBP6.46□□□□□ -1.38
CSMD3-209ENST00000519485 KANSL3Q9P2N6 904 aa6.46□□□□□ -1.38
CSMD3-209ENST00000519485 ANGEL1Q9UNK9 670 aaKnown RBP6.46□□□□□ -1.38
CSMD3-209ENST00000519485 EIF4EBP3O60516 100 aaPredicted RBP6.45□□□□□ -1.38
CSMD3-209ENST00000519485 ITGB5P18084 799 aa6.45□□□□□ -1.38
CSMD3-209ENST00000519485 JAG1P78504 1218 aa6.45□□□□□ -1.38
CSMD3-209ENST00000519485 SGO2Q562F6 1265 aa6.45□□□□□ -1.38
CSMD3-209ENST00000519485 NUTM2GQ5VZR2 741 aa6.45□□□□□ -1.38
CSMD3-209ENST00000519485 VSIG10LQ86VR7 867 aa6.45□□□□□ -1.38
CSMD3-209ENST00000519485 POU5F2Q8N7G0 328 aa6.45□□□□□ -1.38
CSMD3-209ENST00000519485 CYP4F12Q9HCS2 524 aa6.45□□□□□ -1.38
CSMD3-209ENST00000519485 CES1P23141 567 aa6.44□□□□□ -1.38
CSMD3-209ENST00000519485 OGFOD2Q6N063 350 aa6.44□□□□□ -1.38
CSMD3-209ENST00000519485 C1orf127Q8N9H9 656 aa6.44□□□□□ -1.38
CSMD3-209ENST00000519485 BSNDQ8WZ55 320 aa6.44□□□□□ -1.38
CSMD3-209ENST00000519485 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
CSMD3-209ENST00000519485 LOC100289279A0A1B0GTE1 492 aa6.43□□□□□ -1.38
CSMD3-209ENST00000519485 SOX1O00570 391 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-209ENST00000519485 ACPPP15309 386 aa6.43□□□□□ -1.38
CSMD3-209ENST00000519485 JUNBP17275 347 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-209ENST00000519485 VN1R5Q7Z5H4 357 aa6.43□□□□□ -1.38
CSMD3-209ENST00000519485 SLC7A3Q8WY07 619 aa6.43□□□□□ -1.38
CSMD3-209ENST00000519485 EZH1Q92800 747 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-209ENST00000519485 NXPE3Q969Y0 559 aa6.43□□□□□ -1.38
CSMD3-209ENST00000519485 ASIC4Q96FT7 647 aa6.43□□□□□ -1.38
CSMD3-209ENST00000519485 CHRDQ9H2X0 955 aa6.43□□□□□ -1.38
CSMD3-209ENST00000519485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.43□□□□□ -1.38
CSMD3-209ENST00000519485 FAM95CA0A1B0GW59 222 aa6.42□□□□□ -1.38
CSMD3-209ENST00000519485 TMEM164Q5U3C3 297 aa6.42□□□□□ -1.38
CSMD3-209ENST00000519485 PAOXQ6QHF9 649 aa6.42□□□□□ -1.38
CSMD3-209ENST00000519485 BSDC1Q9NW68 430 aaPredicted RBP6.42□□□□□ -1.38
CSMD3-209ENST00000519485 PCSK2P16519 638 aa6.41□□□□□ -1.38
CSMD3-209ENST00000519485 IKBKEQ14164 716 aa6.41□□□□□ -1.38
CSMD3-209ENST00000519485 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
CSMD3-209ENST00000519485 HGSNATQ68CP4 663 aa6.41□□□□□ -1.38
CSMD3-209ENST00000519485 ZAR1Q86SH2 424 aa6.41□□□□□ -1.38
CSMD3-209ENST00000519485 FBXL6Q8N531 539 aa6.41□□□□□ -1.38
CSMD3-209ENST00000519485 C12orf50Q8NA57 414 aaPredicted RBP6.41□□□□□ -1.38
CSMD3-209ENST00000519485 BHLHE41Q9C0J9 482 aaPredicted RBP6.41□□□□□ -1.38
CSMD3-209ENST00000519485 ZNF777Q9ULD5 760 aaPredicted RBP6.41□□□□□ -1.38
CSMD3-209ENST00000519485 RXRBP28702 533 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 ATCAYQ86WG3 371 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 C2CD4AQ8NCU7 369 aaPredicted RBP6.4□□□□□ -1.38
CSMD3-209ENST00000519485 AGBL5Q8NDL9 886 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 HELQQ8TDG4 1101 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 GATA6Q92908 595 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 HHIPQ96QV1 700 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 OSMRQ99650 979 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 GGNBP2Q9H3C7 697 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 PRKAG2Q9UGJ0 569 aa6.4□□□□□ -1.38
CSMD3-209ENST00000519485 DLGAP3O95886 979 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 PDGFAP04085 211 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 MZF1P28698 734 aaPredicted RBP6.39□□□□□ -1.39
CSMD3-209ENST00000519485 COL19A1Q14993 1142 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 CDPF1Q6NVV7 123 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 EDEM1Q92611 657 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 ZKSCAN3Q9BRR0 538 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 YIPF2Q9BWQ6 316 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 NRSN2Q9GZP1 204 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 SLAIN2Q9P270 581 aa6.39□□□□□ -1.39
CSMD3-209ENST00000519485 CYP26A1O43174 497 aa6.38□□□□□ -1.39
CSMD3-209ENST00000519485 C8AP07357 584 aa6.38□□□□□ -1.39
CSMD3-209ENST00000519485 ESRRAP11474 423 aaPredicted RBP6.38□□□□□ -1.39
CSMD3-209ENST00000519485 EDN3P14138 238 aa6.38□□□□□ -1.39
CSMD3-209ENST00000519485 USP11P51784 963 aa6.38□□□□□ -1.39
CSMD3-209ENST00000519485 TP53INP2Q8IXH6 220 aa6.38□□□□□ -1.39
CSMD3-209ENST00000519485 FBLIM1Q8WUP2 373 aa6.38□□□□□ -1.39
CSMD3-209ENST00000519485 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.37□□□□□ -1.39
CSMD3-209ENST00000519485 TRPA1O75762 1119 aa6.37□□□□□ -1.39
CSMD3-209ENST00000519485 ADMP35318 185 aa6.37□□□□□ -1.39
CSMD3-209ENST00000519485 SOX4Q06945 474 aaPredicted RBP6.37□□□□□ -1.39
CSMD3-209ENST00000519485 NFKBIBQ15653 356 aa6.37□□□□□ -1.39
CSMD3-209ENST00000519485 NOM1Q5C9Z4 860 aaKnown RBP6.37□□□□□ -1.39
CSMD3-209ENST00000519485 SHISA5Q8N114 240 aa6.37□□□□□ -1.39
CSMD3-209ENST00000519485 USP26Q9BXU7 913 aa6.37□□□□□ -1.39
CSMD3-209ENST00000519485 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
CSMD3-209ENST00000519485 SEPT3Q9UH03 358 aa6.37□□□□□ -1.39
CSMD3-209ENST00000519485 DRD2P14416 443 aa6.36□□□□□ -1.39
CSMD3-209ENST00000519485 ATP2B4P23634 1241 aa6.36□□□□□ -1.39
CSMD3-209ENST00000519485 CYP27A1Q02318 531 aa6.36□□□□□ -1.39
CSMD3-209ENST00000519485 DNM1Q05193 864 aaKnown RBP6.36□□□□□ -1.39
CSMD3-209ENST00000519485 TTC16Q8NEE8 873 aa6.36□□□□□ -1.39
CSMD3-209ENST00000519485 TBC1D32Q96NH3 1257 aa6.36□□□□□ -1.39
CSMD3-209ENST00000519485 PAK6Q9NQU5 681 aaPredicted RBP6.36□□□□□ -1.39
CSMD3-209ENST00000519485 EREGO14944 169 aa6.35□□□□□ -1.39
CSMD3-209ENST00000519485 TNFRSF21O75509 655 aa6.35□□□□□ -1.39
CSMD3-209ENST00000519485 ADH5P11766 374 aa6.35□□□□□ -1.39
CSMD3-209ENST00000519485 EHHADHQ08426 723 aa6.35□□□□□ -1.39
CSMD3-209ENST00000519485 SNX29Q8TEQ0 813 aa6.35□□□□□ -1.39
CSMD3-209ENST00000519485 NPR3P17342 541 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms