RNA–Protein interactions for RNA: ENST00000519401.5

SPIDR-211, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,090 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-211ENST00000519401 BICD2Q8TD16 824 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 BORCS6Q96GS4 357 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
SPIDR-211ENST00000519401 NUCKS1Q9H1E3 243 aaKnown RBP13.14□□□□□ -0.31
SPIDR-211ENST00000519401 PDE11AQ9HCR9 933 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 DACT1Q9NYF0 836 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 PALD1Q9ULE6 856 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 LIMCH1Q9UPQ0 1083 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 ATRNO75882 1429 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 NEBLO76041 1014 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 RDXP35241 583 aaKnown RBP13.14□□□□□ -0.31
SPIDR-211ENST00000519401 STX1AQ16623 288 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 BEND6Q5SZJ8 279 aaPredicted RBP13.14□□□□□ -0.31
SPIDR-211ENST00000519401 WLSQ5T9L3 541 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
SPIDR-211ENST00000519401 TTC6Q86TZ1 520 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 AMOTL1Q8IY63 956 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 CNNM3Q8NE01 707 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 CTCFLQ8NI51 663 aaPredicted RBP13.14□□□□□ -0.31
SPIDR-211ENST00000519401 GBP3Q9H0R5 595 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
SPIDR-211ENST00000519401 ANKRD18BA2A2Z9 1011 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 EXOC5O00471 708 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 URI1O94763 535 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-211ENST00000519401 RWDD2BP57060 319 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-211ENST00000519401 CKAP2LQ8IYA6 745 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 ERCC4Q92889 916 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-211ENST00000519401 TTC14Q96N46 770 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 THUMPD2Q9BTF0 503 aaKnown RBP13.13□□□□□ -0.31
SPIDR-211ENST00000519401 FAN1Q9Y2M0 1017 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 PLCH1Q4KWH8 1693 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 KIAA0232Q92628 1395 aa13.13□□□□□ -0.31
SPIDR-211ENST00000519401 SHOX2O60902 331 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 RXRBP28702 533 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 HSPA4P34932 840 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 NLRP6P59044 892 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 TRAF1Q13077 416 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 SF3B2Q13435 895 aaKnown RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 NAIF1Q69YI7 327 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 HDGFL2Q7Z4V5 671 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 ANKRD18AQ8IVF6 992 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 C16orf71Q8IYS4 520 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 MRFAP1Q9Y605 127 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 RTN2O75298 545 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 ZC3H6P61129 1189 aaKnown RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 PPP2R3AQ06190 1150 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 CAMK4Q16566 473 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 SPATS2Q86XZ4 545 aaKnown RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 ZSCAN31Q96LW9 406 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 JPH2Q9BR39 696 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 VIPAS39Q9H9C1 493 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 ZRANB1Q9UGI0 708 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 TRPC5Q9UL62 973 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-211ENST00000519401 L1RE1Q9UN81 338 aa13.12□□□□□ -0.31
SPIDR-211ENST00000519401 A0A1B0GUA9 196 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 GOLGA6L4A6NEF3 574 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 EBAG9O00559 213 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 ZSCAN12O43309 604 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 TBC1D8BQ0IIM8 1120 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 GORABQ5T7V8 394 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 CPLX2Q6PUV4 134 aaKnown RBP13.11□□□□□ -0.31
SPIDR-211ENST00000519401 UNC5CLQ8IV45 518 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 MSANTD4Q8NCY6 345 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 N4BP2L2Q92802 583 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-211ENST00000519401 SH2B1Q9NRF2 756 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-211ENST00000519401 SPATS2LQ9NUQ6 558 aaKnown RBP13.11□□□□□ -0.31
SPIDR-211ENST00000519401 SLIT3O75094 1523 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
SPIDR-211ENST00000519401 BECN2A8MW95 431 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 FYB1O15117 783 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 TUBB2AQ13885 445 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 CHRNA2Q15822 529 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 CEP112Q8N8E3 955 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 TUBB2BQ9BVA1 445 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 GGNBP2Q9H3C7 697 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 PRDM11Q9NQV5 511 aa13.11□□□□□ -0.31
SPIDR-211ENST00000519401 COL14A1Q05707 1796 aaKnown RBP13.1□□□□□ -0.31
SPIDR-211ENST00000519401 GIGYF1O75420 1035 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-211ENST00000519401 FSBPO95073 299 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 GCP02774 474 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 INPP5BP32019 993 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 AARSP49588 968 aaKnown RBP eCLIP13.1□□□□□ -0.31
SPIDR-211ENST00000519401 LIG3P49916 1009 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 PDE1AP54750 535 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 NME9Q86XW9 330 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 CCDC26Q8TAB7 109 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 ZNF483Q8TF39 744 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-211ENST00000519401 FAM169AQ9Y6X4 670 aa13.1□□□□□ -0.31
SPIDR-211ENST00000519401 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.1□□□□□ -0.31
SPIDR-211ENST00000519401 PDCP20941 246 aa13.09□□□□□ -0.31
SPIDR-211ENST00000519401 NOL8Q76FK4 1167 aaKnown RBP13.09□□□□□ -0.31
SPIDR-211ENST00000519401 MAGEC3Q8TD91 643 aa13.09□□□□□ -0.31
SPIDR-211ENST00000519401 OTUD7AQ8TE49 926 aaPredicted RBP13.09□□□□□ -0.31
SPIDR-211ENST00000519401 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms