RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
CTNNA1-212ENST00000518919 UNC13BO14795 1591 aa6.64□□□□□ -1.35
CTNNA1-212ENST00000518919 FAM187AA6NFU0 413 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 POTECB2RU33 542 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 SASH3O75995 380 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 STK10O94804 968 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 FGRP09769 529 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 FAM157BP0CG42 384 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 FCGRTP55899 365 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 CCDC85BQ15834 202 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 PRPF40BQ6NWY9 871 aaKnown RBP6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 MAGI2Q86UL8 1455 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 MCF2L2Q86YR7 1114 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 GLIS3Q8NEA6 775 aa6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 HIRIP3Q9BW71 556 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
CTNNA1-212ENST00000518919 ABCA9Q8IUA7 1624 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 ZFYVE16Q7Z3T8 1539 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 FAM135AQ9P2D6 1515 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 TRAPPC8Q9Y2L5 1435 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 RARAP10276 462 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 KCNQ4P56696 695 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 PWP1Q13610 501 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 CCINQ13939 588 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 GIMAP6Q6P9H5 292 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 FIGNL1Q6PIW4 674 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 KIAA0825Q8IV33 1275 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 C3orf58Q8NDZ4 430 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 SPON2Q9BUD6 331 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 PPM1HQ9ULR3 514 aa6.62□□□□□ -1.35
CTNNA1-212ENST00000518919 NUP155O75694 1391 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 DCDC2BA2VCK2 349 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 ATXN7O15265 892 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 MMP20O60882 483 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 ATF4P18848 351 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 LBRQ14739 615 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 CCDC144BQ3MJ40 725 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 PEAR1Q5VY43 1037 aaPredicted RBP6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 TRIM46Q7Z4K8 759 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 NOP9Q86U38 636 aaKnown RBP6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 OR13H1Q8NG92 308 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 PNMA5Q96PV4 448 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 LIN7BQ9HAP6 207 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 ABCB6Q9NP58 842 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 DNMT3LQ9UJW3 386 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 AKAP2Q9Y2D5 859 aa6.61□□□□□ -1.35
CTNNA1-212ENST00000518919 DUOX2Q9NRD8 1548 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 ASXL2Q76L83 1435 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 ERBINQ96RT1 1412 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 F6X3S4 739 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 KHNYNO15037 678 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 PSAPP07602 524 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 TSPY4P0CV99 314 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 TSPY10P0CW01 314 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 XRCC5P13010 732 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 NFKB1P19838 968 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 TARSP26639 723 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 SFSWAPQ12872 951 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.6□□□□□ -1.358e-8■□□□□ 9.7
CTNNA1-212ENST00000518919 NBPF8Q3BBV2 869 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 SOGA3Q5TF21 947 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 DTHD1Q6ZMT9 781 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 NCAPG2Q86XI2 1143 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 RELL1Q8IUW5 271 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 RASGRP4Q8TDF6 673 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 RSRP1Q9BUV0 290 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 PDZRN3Q9UPQ7 1066 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 TMA7Q9Y2S6 64 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 IQGAP3Q86VI3 1631 aa6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 INO80Q9ULG1 1556 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-212ENST00000518919 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 EFSO43281 561 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 FBXO24O75426 580 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 CENPBP07199 599 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 HSPA5P11021 654 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 GBP2P32456 591 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 MAP3K11Q16584 847 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 RIPOR1Q6ZS17 1223 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 ZFP42Q96MM3 310 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 YTHDC1Q96MU7 727 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 TRIM56Q9BRZ2 755 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 GSX2Q9BZM3 304 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 ZSWIM4Q9H7M6 989 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 SALL4Q9UJQ4 1053 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 PCDHGC4Q9Y5F7 938 aa6.59□□□□□ -1.35
CTNNA1-212ENST00000518919 PLA2R1Q13018 1463 aa6.59□□□□□ -1.36
CTNNA1-212ENST00000518919 UHRF1BP1Q6BDS2 1440 aa6.59□□□□□ -1.36
CTNNA1-212ENST00000518919 SPATA31E1Q6ZUB1 1445 aa6.59□□□□□ -1.36
CTNNA1-212ENST00000518919 MINDY4BA8MYZ0 360 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 MAN1A2O60476 641 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 AVPP01185 164 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 SSBP05455 408 aaKnown RBP eCLIP6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 RLBP1P12271 317 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 CDK11BP21127 795 aaKnown RBP6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 SOX18P35713 384 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 RBL2Q08999 1139 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 HYAL2Q12891 473 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 LAMC2Q13753 1193 aa6.58□□□□□ -1.36
CTNNA1-212ENST00000518919 EFCAB2Q5VUJ9 269 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms